BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0263600 Os08g0263600|Os08g0263600
(503 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0263600 Similar to Transposase 1054 0.0
Os02g0668200 Similar to Transposase 350 1e-96
Os05g0366100 249 5e-66
Os05g0370100 199 5e-51
Os09g0446400 Similar to Transposase 194 1e-49
Os04g0615900 FAR1 domain containing protein 92 1e-18
Os11g0150900 88 2e-17
Os08g0143800 FAR1 domain containing protein 87 2e-17
Os05g0475600 FAR1 domain containing protein 85 1e-16
Os07g0615900 Zinc finger, GATA-type domain containing protein 85 2e-16
Os03g0181600 Similar to GATA transcription factor 25 (ZIM-l... 85 2e-16
Os03g0655600 Herpesvirus glycoprotein H family protein 81 2e-15
Os10g0578150 81 2e-15
Os02g0604600 80 4e-15
Os03g0164400 FAR1 domain containing protein 79 6e-15
Os11g0219100 79 7e-15
Os03g0334400 79 9e-15
Os01g0162000 77 2e-14
Os01g0510400 76 6e-14
Os02g0202800 FAR1 domain containing protein 75 8e-14
Os03g0576100 FAR1 domain containing protein 75 1e-13
Os02g0262500 73 4e-13
Os07g0563600 FAR1 domain containing protein 72 8e-13
Os03g0777700 FAR1 domain containing protein 71 2e-12
Os06g0597800 FAR1 domain containing protein 68 2e-11
Os03g0255400 FAR1 domain containing protein 67 3e-11
Os05g0128700 66 5e-11
Os09g0105100 66 6e-11
>Os08g0263600 Similar to Transposase
Length = 503
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/503 (100%), Positives = 503/503 (100%)
Query: 1 MDAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEK 60
MDAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEK
Sbjct: 1 MDAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEK 60
Query: 61 FYKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRC 120
FYKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRC
Sbjct: 61 FYKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRC 120
Query: 121 GCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASV 180
GCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASV
Sbjct: 121 GCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASV 180
Query: 181 GTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEMLENVYNDYGNLLEEIA 240
GTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEMLENVYNDYGNLLEEIA
Sbjct: 181 GTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEMLENVYNDYGNLLEEIA 240
Query: 241 IDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAPLDQMVAGGRQTRQE 300
IDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAPLDQMVAGGRQTRQE
Sbjct: 241 IDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAPLDQMVAGGRQTRQE 300
Query: 301 EFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSKENKNQGSNTSKYQGGKERIPRLCKIC 360
EFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSKENKNQGSNTSKYQGGKERIPRLCKIC
Sbjct: 301 EFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSKENKNQGSNTSKYQGGKERIPRLCKIC 360
Query: 361 KEMVFHDSRNCPNKTSISPDDRFESVFKLCFVTAIAEELRVVAAAVTGMKIRGWRLRQWR 420
KEMVFHDSRNCPNKTSISPDDRFESVFKLCFVTAIAEELRVVAAAVTGMKIRGWRLRQWR
Sbjct: 361 KEMVFHDSRNCPNKTSISPDDRFESVFKLCFVTAIAEELRVVAAAVTGMKIRGWRLRQWR 420
Query: 421 PTTRGKDDDLFTARFVAATNGDEDAEEMQRYRIARMATKEAEGAAGGVATMVQPWVTGCG 480
PTTRGKDDDLFTARFVAATNGDEDAEEMQRYRIARMATKEAEGAAGGVATMVQPWVTGCG
Sbjct: 421 PTTRGKDDDLFTARFVAATNGDEDAEEMQRYRIARMATKEAEGAAGGVATMVQPWVTGCG 480
Query: 481 VVFGPSPRPPCTSASSSLTCKGT 503
VVFGPSPRPPCTSASSSLTCKGT
Sbjct: 481 VVFGPSPRPPCTSASSSLTCKGT 503
>Os02g0668200 Similar to Transposase
Length = 766
Score = 350 bits (898), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 171/225 (76%), Positives = 191/225 (84%), Gaps = 2/225 (0%)
Query: 2 DAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSSFTPDCDEEITPAVGMKFEDIEAVEKF 61
D +S+D+I P+ +DD +TPKK IPLNCS FTP+CD++I PAVGM FEDI +VEKF
Sbjct: 45 DIYSNDDITSPVIEDDNT-STPKKISRIPLNCSVFTPECDDKIRPAVGMTFEDIASVEKF 103
Query: 62 YKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLK-ETRC 120
YKSY H VGFSVRIGQQKKL+ VVQCK F+CSRQGWK EI DPSKK++ ETRC
Sbjct: 104 YKSYAHQVGFSVRIGQQKKLDGVVQCKHFVCSRQGWKHVNDKEIVDPSKKKKIKLKETRC 163
Query: 121 GCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASV 180
GCDAHI+VKLCSDNKY IASLVEHHSHGLVSPDKLHL+RSNREVSERAK TLFT RAS+
Sbjct: 164 GCDAHIYVKLCSDNKYTIASLVEHHSHGLVSPDKLHLIRSNREVSERAKTTLFTCSRASI 223
Query: 181 GTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEML 225
GTSQAYRLLHVSDGGF+NVGCTKRDLQNYYRDLR K+KNADA+M
Sbjct: 224 GTSQAYRLLHVSDGGFQNVGCTKRDLQNYYRDLRKKIKNADAQMF 268
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/113 (72%), Positives = 92/113 (81%)
Query: 226 ENVYNDYGNLLEEIAIDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEA 285
ENVY++ GNL+EE IDSSE A+RKKIS A NKFEDLIQKAKHS E IDFLTSSV +LEA
Sbjct: 651 ENVYDEQGNLIEEKPIDSSEAAMRKKISIARNKFEDLIQKAKHSDEGIDFLTSSVFNLEA 710
Query: 286 PLDQMVAGGRQTRQEEFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSKENKN 338
PLDQMV+ + TR EEFESFLGC IPTE+DI P TD HSRGR KRIR ++ N
Sbjct: 711 PLDQMVSNVKHTRHEEFESFLGCTIPTEIDIHPPTDIHSRGRSKRIRRSKDDN 763
>Os05g0366100
Length = 684
Score = 249 bits (635), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 162/231 (70%), Gaps = 6/231 (2%)
Query: 1 MDAHSDDEIAIPLSDDDERFNTPKKKPSIPLNCSS--FTPDCDEEITPAVGMKFEDIEAV 58
++A + D I + D ++PS P SS C E + P VGM F+ + V
Sbjct: 38 VEATAMDHAVITVEAVDAGVVAHLEQPSTPQPTSSPSIAESCKEHLKPMVGMIFDTLTDV 97
Query: 59 EKFYKSYVHTVGFSVRIGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPS-KKRRK--- 114
EKFYKSY H GFSVR+GQ KK NE + K + CSR+G+ ++ ++SD S KK+RK
Sbjct: 98 EKFYKSYAHEAGFSVRVGQHKKQNEEILFKRYYCSREGYIKERVKDVSDESGKKKRKTPY 157
Query: 115 LKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFT 174
+ ETRCGC+AHI VKL SD KY I+S++ HSHG VSPDK HL+RSNR VSERAK+TLF+
Sbjct: 158 MMETRCGCEAHIVVKLGSDKKYRISSMIGEHSHGFVSPDKRHLLRSNRTVSERAKSTLFS 217
Query: 175 SHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNADAEML 225
H+AS+GTSQA+RLL VSDGGF+NVGCT R+LQNYY DLR K+K+ADA+M
Sbjct: 218 CHKASIGTSQAFRLLQVSDGGFQNVGCTLRNLQNYYHDLRCKIKDADAQMF 268
>Os05g0370100
Length = 584
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 98/196 (50%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 32 NCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNEVVQCKCFM 91
+ S T DCD+ + P +GM F +E+ ++FY+SY VGFSVRIGQ KK++ VV K F+
Sbjct: 13 DAESVTADCDDSMVPNIGMTFNGLESAKEFYESYALRVGFSVRIGQHKKVDGVVLYKLFL 72
Query: 92 CSRQG-WKSKKGNEISDPSKKRRKLKE-TRCGCDAHIFVKLCSDNKYHIASLVEHHSHGL 149
C+ +G W+ K + S+KR K TRCGC+A + +KL +KY I + H+H
Sbjct: 73 CANEGFWEDKGERGLESGSEKRSYEKRITRCGCEAKLVIKLVDGDKYVITGFEQGHTHAF 132
Query: 150 VSPDKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNY 209
VSPDK HL+RSNR+++ +NTL T H+AS+GTSQAYR L V GGFENVG TKRDLQNY
Sbjct: 133 VSPDKRHLIRSNRKLTLSGRNTLLTCHKASIGTSQAYRYLRVGVGGFENVGFTKRDLQNY 192
Query: 210 YRDLRTKMKNADAEML 225
+ LR +K++DA M
Sbjct: 193 HSALRVLIKSSDALMF 208
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 66/148 (44%), Positives = 99/148 (66%), Gaps = 2/148 (1%)
Query: 227 NVYNDYGNLLEEIAIDSSEMAVRKKISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAP 286
+V++ G LLEE +S++ ++K +S ACN+ E LI +AK SA A+ L ++ L
Sbjct: 435 HVFDADGILLEENTSNSNDPVMQKMLSEACNQMEKLILQAKQSAAAMQLLRDELVVLGDK 494
Query: 287 LDQMVAGGRQTRQEEFESFLGCNIPTEVDILPTTDTHSRGRIKRIRSKENKNQGSNTSKY 346
L++MV ++ EEFES+LGC+IP++++I P DT SRGRIKRI K + ++ +K
Sbjct: 495 LNEMVPEKELSQIEEFESYLGCSIPSQIEIHPPNDTRSRGRIKRI--KGHNDKEKKQNKK 552
Query: 347 QGGKERIPRLCKICKEMVFHDSRNCPNK 374
+ KER+PR CK CK+++ HDS NCPNK
Sbjct: 553 RKKKERVPRRCKKCKQVMLHDSHNCPNK 580
>Os09g0446400 Similar to Transposase
Length = 561
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 126/205 (61%), Gaps = 50/205 (24%)
Query: 23 PKKKPSIPLNCSSFTPDCD--EEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKK 80
PK SI ++C+S T + E + P VGM F+ + VEKFYKSY H GFSVR+
Sbjct: 65 PKSSVSIAVSCTSDTCNTHWKEHLKPMVGMIFDTLTDVEKFYKSYAHKAGFSVRV----- 119
Query: 81 LNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIAS 140
AHI VKL SD KY I+S
Sbjct: 120 -------------------------------------------AHIVVKLGSDKKYRISS 136
Query: 141 LVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVG 200
+VE H+HG VS DK HL+RSNR VSERAK+TLF+ H+AS+GTSQAYRLLHVS+GGFENVG
Sbjct: 137 MVEEHNHGFVSLDKRHLLRSNRNVSERAKSTLFSCHKASIGTSQAYRLLHVSEGGFENVG 196
Query: 201 CTKRDLQNYYRDLRTKMKNADAEML 225
CTKRDLQNYYRDLRTK+K+ADA++
Sbjct: 197 CTKRDLQNYYRDLRTKIKDADAQIF 221
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 109/182 (59%), Gaps = 13/182 (7%)
Query: 195 GFENVGCTKRDLQNYYRDLRTK---MKNADAEMLENVYNDYGNLLEEIAIDSSEMAVRKK 251
GFEN D ++ + + T M N E +++D GNLL+E D E+A++KK
Sbjct: 386 GFEN----SDDFESQWNSIITDFGLMGNDWFSTRELLFDDEGNLLDEKPKDPMEVAMQKK 441
Query: 252 ISAACNKFEDLIQKAKHSAEAIDFLTSSVLSLEAPLDQMVAGGRQTRQEEFESFLGCNIP 311
IS + NKFEDLIQ AK+S + +DFL SS+ +L PL ++ R +Q+E+ESFLG IP
Sbjct: 442 ISVSRNKFEDLIQMAKNSEQGMDFLHSSLSNLVEPLQKITPATRVNKQDEYESFLGSKIP 501
Query: 312 TEVDILPTTDTHSRGRIKRIRSKENKNQGSNTSKYQGGKERIPRLCKICKEMVFHDSRNC 371
E++I P D S+GR KRIR + K GS G K R C+ CK++V HD+RNC
Sbjct: 502 NEINIHPPNDIKSKGRCKRIRKSKEKKAGS------GSKGTSKRKCRKCKQVVDHDARNC 555
Query: 372 PN 373
PN
Sbjct: 556 PN 557
>Os04g0615900 FAR1 domain containing protein
Length = 684
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 73/123 (59%), Gaps = 9/123 (7%)
Query: 45 TPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG-QQKKLNEVVQCKCFMCSRQGWKSKKGN 103
P VGM FE+ E ++Y SY VGFSVR G K + V + + F+CSR+G++SK
Sbjct: 185 VPIVGMVFENEEKAYEYYASYAGNVGFSVRKGLWDKTVKNVARSRVFVCSREGFRSK--- 241
Query: 104 EISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNRE 163
++ +R ETR GC A I +KL S+ KY +A VE H+H L +P + +++S R
Sbjct: 242 -----NEAKRPRPETRTGCPARIAIKLVSNGKYRVAEFVEDHNHQLAAPFDIDMLKSERV 296
Query: 164 VSE 166
+++
Sbjct: 297 LTK 299
>Os11g0150900
Length = 1185
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 6/186 (3%)
Query: 42 EEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVR--IGQQKKLNEVVQCKCFMCSRQGWKS 99
EE +GMKF +FY Y GFSVR ++ + + ++ + F CSR+G++
Sbjct: 573 EEYATIIGMKFPSELHGFQFYNKYARERGFSVRKDYCRRDRFSGIIIHRRFTCSREGFRK 632
Query: 100 KKGNEISDPSKKRRKLKETRCGCDAHIFVKLCS-DNKYHIASLVEHHSHGLVSPDKLHLM 158
+ ++S+ S++ + L TRCGC A +KL + +++ V H+H L D++ +
Sbjct: 633 ELYMDVSNRSREPQAL--TRCGCKAQFEIKLYQKEGNWYVVRFVSKHNHPLCKGDQVPFL 690
Query: 159 RSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTK-M 217
RS+R ++ + + + Q ++ GG+E G T RD+ N++ L+ K +
Sbjct: 691 RSHRRITPAEQAKMVELRDVGLHQHQVMDIMERDHGGYEGTGFTSRDMYNFFVKLKKKRI 750
Query: 218 KNADAE 223
K DA+
Sbjct: 751 KGGDAD 756
>Os08g0143800 FAR1 domain containing protein
Length = 430
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 32 NCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKL--NEVVQCKC 89
N S T E++TP VGMKF + FY +Y +GFS+R + ++++ +
Sbjct: 60 NEDSQTRKASEKMTPKVGMKFNSEQEAYDFYNAYASEIGFSIRRSSYHYMGNTKIIKNRT 119
Query: 90 FMCSRQGWKS--------KKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASL 141
F CSR+G + GN + P ETRC C A + + L D Y +
Sbjct: 120 FCCSREGTRGVDKRTEALGYGNSFNRP--------ETRCKCQACMKISLI-DGFYQVYHF 170
Query: 142 VEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGC 201
V HSH L + + H +RS R+V+E ++ + + T LL G+EN+G
Sbjct: 171 VPEHSHILATKSQAHQLRSQRKVNEAQVASVEVAKSVGISTKAVVDLLAKQSCGYENLGF 230
Query: 202 TKRDLQNYY---RDLRTK 216
T+ D++N R L+TK
Sbjct: 231 TRVDMKNKLYSKRSLQTK 248
>Os05g0475600 FAR1 domain containing protein
Length = 713
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 36/228 (15%)
Query: 32 NCSSFTPDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVR------IGQQKKLNEVV 85
N ++ T E++ P +GMKF + FY +Y GFS+R IG K ++
Sbjct: 64 NEAAHTTKYLEDLVPKIGMKFSSEQEAYDFYNAYALKKGFSIRRSSYHYIGNTK----II 119
Query: 86 QCKCFMCSRQGWK--------SKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYH 137
+ F CSRQG + S G+ S P ETRC C A + + L D Y
Sbjct: 120 KNMTFCCSRQGSRGIDKRAEASGYGDSFSKP--------ETRCKCQACMKISLI-DGFYS 170
Query: 138 IASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFE 197
I V H+H L + + H +RS R+++E ++ + + T A L+ GFE
Sbjct: 171 IYHFVPEHNHNLATRSQAHQLRSQRKINEAQVASIEVAKSIGISTKAAIDLMAKQACGFE 230
Query: 198 NVGCTKRDLQNYYRDLRTKMKNADAEMLENVYNDYGNLLEEIAIDSSE 245
N+G T+ D++N R+ L+ D G +LE + +SE
Sbjct: 231 NLGFTRVDIKNKLYSKRS---------LQTKQGDTGGVLEYMEKKASE 269
>Os07g0615900 Zinc finger, GATA-type domain containing protein
Length = 732
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 90/187 (48%), Gaps = 14/187 (7%)
Query: 38 PDCDE----EITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG-QQKKLNEVVQCKCFMC 92
P DE ++ P VGM+FE + +FY Y VGFSVR K + + + F+C
Sbjct: 109 PPIDEAALAKLVPEVGMEFESEDKAYEFYNKYAGHVGFSVRKSTSHKSSGNITKVRTFVC 168
Query: 93 SRQGW-KSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVS 151
SR+G+ + KK E P +TR GC A + +K+ ++KY + H+H L
Sbjct: 169 SREGYNRDKKSLEAKKPRL------DTRIGCPARLIIKVTPESKYRVTDFKADHNHQLAP 222
Query: 152 PDKLHLMRSNREVSE-RAKNTLFTSHRASVGTSQAYRLLHVSDGGF-ENVGCTKRDLQNY 209
P +H++RS R ++E ++ + T++A L V GF ++ D +NY
Sbjct: 223 PSTMHMLRSQRILTELQSGEAELSDDSVMTPTTKATGDLVVRQIGFLRSISLLPADYKNY 282
Query: 210 YRDLRTK 216
R R K
Sbjct: 283 LRSKRMK 289
>Os03g0181600 Similar to GATA transcription factor 25 (ZIM-like 2 protein)
Length = 732
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 7/126 (5%)
Query: 43 EITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNE-VVQCKCFMCSRQGW-KSK 100
++ P + M+F+D + +FY Y VGFSVR K E + + + F+CSR+G+ K K
Sbjct: 83 QMVPELSMEFDDEDKAYEFYNRYAGHVGFSVRKSSSDKSAENITRSRTFVCSREGFRKDK 142
Query: 101 KGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRS 160
KG + + +R ETR GC A + +K+ SD KY I+ V H+H P +H++RS
Sbjct: 143 KGAK-----EVKRPRPETRIGCPARMSIKITSDGKYRISEFVPDHNHQPAPPSTMHMLRS 197
Query: 161 NREVSE 166
R ++E
Sbjct: 198 QRVLTE 203
>Os03g0655600 Herpesvirus glycoprotein H family protein
Length = 1066
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 44 ITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG--QQKKLNEVVQCKCFMCSRQGWKSKK 101
+ P GM+F+D E FY Y H VGFS RI + + + + + F+C+++G+++ +
Sbjct: 66 VDPFEGMEFDDEEDAWTFYNVYAHRVGFSTRISVMHRSRRDGSIMSRQFVCAKEGFRTYR 125
Query: 102 G-NEIS--------DPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSP 152
G NE+S D + RR TR GC A I VK + ++ + L H+H LV P
Sbjct: 126 GKNEVSPVAAGSGEDSGRGRRTRAVTRVGCKAMIRVKKQDNGRWAVTKLETAHNHPLVPP 185
Query: 153 DKLHLMRSNREVSERAKNTLF 173
++ H +R ++ +SE K F
Sbjct: 186 NQAHCLRPHKPLSECGKQRQF 206
>Os10g0578150
Length = 749
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 98/190 (51%), Gaps = 6/190 (3%)
Query: 42 EEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLN--EVVQCKCFMCSRQGWKS 99
EE F E KFY Y GFS+R + K+ + E+V + F CS +G+++
Sbjct: 12 EEYNMVASKLFRSEEDGYKFYNEYARCKGFSIRRDKVKRFSGTELVFWRRFYCSCEGYRT 71
Query: 100 KKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDN-KYHIASLVEHHSHGLVSPDKLHLM 158
K E ++ ++ R L TRCGC A + ++L + + ++ HSH L + D + +
Sbjct: 72 LKNFERTNRKREPRAL--TRCGCKAMLEIELNGETGMWFVSGFEARHSHRLANLDLVAFL 129
Query: 159 RSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYY-RDLRTKM 217
RS+REV++ K + T Q ++ ++GG++ VG RDL N++ R + ++
Sbjct: 130 RSHREVNDAQKAEAVELGVGGLRTCQIMEVMENNNGGYDKVGFVTRDLYNFFARYKKKRI 189
Query: 218 KNADAEMLEN 227
+ DA+++ N
Sbjct: 190 EGRDADLVVN 199
>Os02g0604600
Length = 1541
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 10/188 (5%)
Query: 42 EEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKK--LNEVVQCKCFMCSRQGWKS 99
EE M+F+ + FY Y GFSVR ++ + V + + CSR+G +
Sbjct: 707 EEYRTMTAMRFKTEKEGFLFYNRYAKEKGFSVRKNYIRRDPITVAVTHRQYQCSREGHRK 766
Query: 100 KKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNK---YHIASLVEHHSHGLVSPDKLH 156
+ E ++ S++ + L TRCGC+A +KL D K + + V H+H L D++
Sbjct: 767 EVYMEAANRSREPKAL--TRCGCNALFEIKL--DKKKGDWFVVKYVAKHNHPLAKSDEVA 822
Query: 157 LMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTK 216
+RS+R +S K + + Q ++ GGF+ G RDL NY+ LR K
Sbjct: 823 FLRSHRTISNAQKANILELKEVGLRQHQVMDVMERHHGGFDATGFVSRDLYNYFTRLRKK 882
Query: 217 -MKNADAE 223
+ DAE
Sbjct: 883 HILGGDAE 890
>Os03g0164400 FAR1 domain containing protein
Length = 627
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 42 EEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVR--IGQQKKLNEVVQCKCFMCSRQGWKS 99
+E + MKF + FY Y GFSVR ++ + + ++ K F CSR+G++
Sbjct: 6 DEYCKFMAMKFSSEDEGFAFYNQYAKEKGFSVRKDYSRRDRFSGLIFHKRFTCSREGFRK 65
Query: 100 KKGNEISDPSKKRRKLKETRCGCDAHIFVKLCS-DNKYHIASLVEHHSHGLVSPDKLHLM 158
+ + S +++ R L T CGC+AH +KL +++ V H+H L D++ +
Sbjct: 66 EVYMDYSGRTREPRAL--THCGCNAHFEIKLDEIKGHWYVTRFVADHNHPLCKADEVAFL 123
Query: 159 RSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTK 216
RS+R ++ + L + Q ++ GGFE G RDL N++ ++ K
Sbjct: 124 RSHRRITPAQQAKLVELRDLGLHQHQVMDVIERDHGGFEGAGFVTRDLYNFFVKMKKK 181
>Os11g0219100
Length = 583
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 89/184 (48%), Gaps = 5/184 (2%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNE--VVQCKCFMCSRQGWKS--KK 101
P +GMKF + FY +Y +GFS+R + + +++ + F CSR G + K+
Sbjct: 73 PIIGMKFNSEQEAYDFYNAYARDMGFSIRRSSYHYVKDSTIIKNRTFCCSRAGTRGHDKR 132
Query: 102 GNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSN 161
++IS+ + + ETRC C A + + L D Y I + H+H L + + +RS
Sbjct: 133 EDQISNYGQCFSR-PETRCMCRACMKISLRDDGLYCIYEFLHEHNHILATGSQALYLRSQ 191
Query: 162 REVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTKMKNAD 221
R+++E + + + L+ GG+EN+G T+ D++N R+ +N
Sbjct: 192 RKITEAQMASAENAKSVGISNKATIDLMAKEAGGYENLGFTREDMKNILYSKRSLKENKW 251
Query: 222 AEML 225
E L
Sbjct: 252 LERL 255
>Os03g0334400
Length = 766
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 12/153 (7%)
Query: 44 ITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQK-KLNEVVQCKCFMCSRQGWKSKKG 102
I P VGM F+ + V Y +Y +GFS+R Q K +++ + K +CS QG + K
Sbjct: 246 ILPQVGMAFDSEQKVYDMYNTYAGKIGFSIRKSQAKHRVDGTIYQKYIVCSNQGQRQTKS 305
Query: 103 NEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNR 162
+ L TR CDA + +C + + +V H+H LVSP+K H +RS R
Sbjct: 306 S-----------LDTTRTSCDACVQFSICRKGIWTVQKVVLEHNHCLVSPNKSHKVRSQR 354
Query: 163 EVSERAKNTLFTSHRASVGTSQAYRLLHVSDGG 195
V E + + A + +Q Y + GG
Sbjct: 355 RVIEADRQLIGQIREAGMKPAQVYEFMKEWYGG 387
>Os01g0162000
Length = 449
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 83/167 (49%), Gaps = 5/167 (2%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNE--VVQCKCFMCSRQGWKS--KK 101
P +GMKF + FY +Y +GFS+R + + +++ + F CSR G + K+
Sbjct: 81 PIIGMKFNSEQEAYDFYNAYARDMGFSIRRSSYHYVKDSTIIKNRTFCCSRAGTRGHDKR 140
Query: 102 GNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSN 161
++IS+ + + ETRC C A + + L D Y I + H+H L + + +RS
Sbjct: 141 EDQISNYGQCFSR-PETRCMCRACMKISLRDDGLYCIYEFLHEHNHILATGSQALYLRSQ 199
Query: 162 REVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQN 208
R+++E + + + L+ GG+EN+G T+ D++N
Sbjct: 200 RKITEAQMASAENAKSVGISNKATIDLMAKEAGGYENLGFTREDMKN 246
>Os01g0510400
Length = 310
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 6/151 (3%)
Query: 61 FYKSYVHTVGFSVRIGQQKKLNEV--VQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKET 118
FY Y GFS+R ++ N V+ + +CSRQG++ K + + +K R + T
Sbjct: 31 FYNKYAWDKGFSIRKSYAERRNAAKEVKRRVIVCSRQGYRESKHVKRDNRIRKARNI--T 88
Query: 119 RCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTSHRA 178
CGC A + K ++++ V+ H+H L +PD+ +RS+R +S+ K + A
Sbjct: 89 HCGCKAKLLNK--DIGQWYVKDFVDDHNHPLAAPDQTCFLRSHRVISDVQKEEIIEMEIA 146
Query: 179 SVGTSQAYRLLHVSDGGFENVGCTKRDLQNY 209
V ++ GG+ENVG DL NY
Sbjct: 147 RVRKHHIMNIMEKQYGGYENVGFIDTDLYNY 177
>Os02g0202800 FAR1 domain containing protein
Length = 721
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 83/193 (43%), Gaps = 16/193 (8%)
Query: 38 PDCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKKLNEVVQC-KCFMCSRQG 96
P+C P VGM F FY SY VGFS+R + C K F+CS +G
Sbjct: 70 PNC----VPKVGMTFNSENEAYDFYNSYARNVGFSIRKNHANTRADGSLCSKYFLCSNEG 125
Query: 97 WKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLH 156
+ + P +K+R TR C A + + + + + + H H LVSPDK H
Sbjct: 126 ---QPVASTTQPGRKKRS--STRSDCKARLQFYISREGIWTVQKVELDHKHYLVSPDKSH 180
Query: 157 LMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQ------NYY 210
++RS R ++ + + + + + R+ G ENV K+D Q +Y
Sbjct: 181 MLRSQRRLTPSYQQIVNEMRQEGITAADMQRVFRQWSRGAENVHLLKKDTQRKYLQPSYA 240
Query: 211 RDLRTKMKNADAE 223
+ L +KN E
Sbjct: 241 QKLLEYLKNKQTE 253
>Os03g0576100 FAR1 domain containing protein
Length = 777
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 12/166 (7%)
Query: 44 ITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ-QKKLNEVVQCKCFMCSRQGWKSKKG 102
I P VGM FE + + Y +Y VGFS+R +++ N + K +C++QG +
Sbjct: 83 IVPQVGMSFESKDKAYEMYNTYAGKVGFSIRKSNVKRRSNGTIYQKHMVCNKQGQQETSS 142
Query: 103 NEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKLHLMRSNR 162
+ L TR C A + +C + + +V H+H LVSP+K H +RS R
Sbjct: 143 S-----------LDTTRTCCKARVQFSVCRKEIWMVQKVVLEHNHDLVSPNKSHKLRSQR 191
Query: 163 EVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQN 208
V E + + A + +Q Y + GG + V +K D N
Sbjct: 192 RVIEADRQLIGQIREAGMKPAQVYGFMKEWYGGADKVPFSKMDCNN 237
>Os02g0262500
Length = 865
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 86/181 (47%), Gaps = 10/181 (5%)
Query: 49 GMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKK--LNEVVQCKCFMCSRQGWKSKKGNEIS 106
M+F+ + FY Y GFSVR ++ + V + + CSR+G + + E +
Sbjct: 3 AMRFKTEKEGFLFYNRYAKEKGFSVRKNYIRRDPITAAVTHRQYQCSREGHRKEVYMEAA 62
Query: 107 DPSKKRRKLKETRCGCDAHIFVKLCSDNK---YHIASLVEHHSHGLVSPDKLHLMRSNRE 163
+ S++ + L TRCGC+A +KL D K + + V H+H L D++ +RS+R
Sbjct: 63 NRSREPKAL--TRCGCNALFEIKL--DKKKGDWFVVKYVAKHNHPLAKSDEVAFLRSHRT 118
Query: 164 VSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDLRTK-MKNADA 222
+S K + + Q ++ GF+ G RDL NY+ LR K + DA
Sbjct: 119 ISNAQKANILELKEVGLRQHQVMDVMERHHSGFDATGFVSRDLYNYFTRLRKKHILGGDA 178
Query: 223 E 223
E
Sbjct: 179 E 179
>Os07g0563600 FAR1 domain containing protein
Length = 903
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 21 NTPKKKPSIPLNCSSFTPD---CDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ 77
N + ++ + + +PD CDE++ P V M F+ + FY +Y VGF VR
Sbjct: 74 NPANPQQNVDVAAADVSPDVGCCDEKMLPKVDMLFDGEKEAYDFYNAYAEMVGFFVRRST 133
Query: 78 QKKLNE-VVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKY 136
++ ++ + F+CSR+G++ KK + + ETR GC A + ++L ++ KY
Sbjct: 134 LWTTSKNIITRRTFVCSREGFREKKRGT----KEAKCPRPETRIGCPASMTIRLNTNGKY 189
Query: 137 HIASLVEHHSHGLVSPDKLHLMRSNR 162
+ V +H+H L + +H++++ +
Sbjct: 190 RLTEFVPNHNHQLATASTMHMLKAKK 215
>Os03g0777700 FAR1 domain containing protein
Length = 800
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 7/123 (5%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ-QKKLNEVVQCKCFMCSRQGWKSKKGNE 104
P VGM F + + Y +Y TVGFSVR G +K + + ++CS++G++SK +
Sbjct: 11 PKVGMVFLNEDKAYDCYVTYAGTVGFSVRKGWLEKTATNTTKSRAYVCSKEGFRSKSVS- 69
Query: 105 ISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSP-DKLHLMRSNRE 163
+DP K R ETR GC AH+ +K+ KY + V H+H L +P + ++RS++
Sbjct: 70 -TDPKKPR---PETRTGCLAHMTIKITVSGKYVVTEYVADHNHDLETPLVDIQVLRSHKL 125
Query: 164 VSE 166
+++
Sbjct: 126 LAK 128
>Os06g0597800 FAR1 domain containing protein
Length = 669
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 46 PAVGMKFEDIEAVEKFYKSYVHTVGFSVRIG----QQKKLNEVVQCKCFMCSRQGWKSKK 101
P +GM+FE A FY +Y +GF +R+ +++K E++ K F+C ++G KK
Sbjct: 65 PCLGMEFESDGAARAFYNAYALRLGFGIRVARSRSERRKGVELLIMKRFVCLKEGHHKKK 124
Query: 102 GNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKL 155
E SD KK+RK R GC A + V K+ I LV H+H ++SPD++
Sbjct: 125 DAEPSD--KKKRKRLSIRDGCPAMMEVVRRGPEKWVITKLVLEHTHVILSPDRV 176
>Os03g0255400 FAR1 domain containing protein
Length = 698
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 4/121 (3%)
Query: 39 DCDEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQ---QKKLNEVVQCKCFMCSRQ 95
+ D E+TP GM+FE +A FY Y GF +RI + ++ N ++ + +CS++
Sbjct: 49 EADTELTPYEGMEFESEDAARDFYSKYARHAGFRIRISRYTRSRRDNSIISRR-IVCSKE 107
Query: 96 GWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDKL 155
G+ + E +K++ TR GC A + +K +K+ + ++ H+HG V P K
Sbjct: 108 GFHETRDCENLHVDQKQQARVGTRVGCKAMLMIKKFGPDKWVVTKFIKIHNHGPVPPRKP 167
Query: 156 H 156
H
Sbjct: 168 H 168
>Os05g0128700
Length = 683
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 89/168 (52%), Gaps = 10/168 (5%)
Query: 61 FYKSYVHTVGFSVR--IGQQKKLNEVVQCKCFMCSRQGWKSKKGNEISDPSKKRRKLKET 118
FY SY GFSVR I +++K ++ + F+CS++G + + D ++ R L T
Sbjct: 49 FYNSYAKRKGFSVRKDIVRREKRVGAIEYRHFVCSKEGIRDPSLVKPEDCVRRERAL--T 106
Query: 119 RCGCDAHIFVKLCSDNK---YHIASLVEHHSHGLVSPDKLHLMRSNREVSERAKNTLFTS 175
+ C A + +KL D K + + + ++ H+H L S D+ +RS+R++ + K+ + +
Sbjct: 107 QMECAASLSIKL--DKKHGIWFVDNFIDEHNHPLTSHDETPFLRSHRKIKDFQKSEIHSL 164
Query: 176 HRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNY-YRDLRTKMKNADA 222
+ + +++ GG++ VG K+DL NY R R+++ DA
Sbjct: 165 ESIGIRKNVIMKVMKCKYGGYDKVGFVKKDLYNYSSRYKRSRILEGDA 212
>Os09g0105100
Length = 648
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 41 DEEITPAVGMKFEDIEAVEKFYKSYVHTVGFSVRIGQQKK------LNEVVQCKCFMCSR 94
D+ P + + F E Y Y VGFS++I +K ++V+ F+C++
Sbjct: 131 DDSEVPYLILTFNSEEEARAHYNRYAKRVGFSIKINTARKSAKDGERDKVM----FVCNK 186
Query: 95 QGWKSKKGNEISDPSKKRRKLKETRCGCDAHIFVKLCSDNKYHIASLVEHHSHGLVSPDK 154
G + K G P+KKR+ + + C A + VK ++ + VE H+H LV
Sbjct: 187 CGPEEKTGEAF--PTKKRKISRTRQAACKARMTVKR-KGARWEVIQFVEEHTHPLVRKFS 243
Query: 155 L-HLMRSNREVSERAKNTLFTSHRASVGTSQAYRLLHVSDGGFENVGCTKRDLQNYYRDL 213
L +RS+R + + K+ + H ++ + +L+ GG NV T++D+ N+ L
Sbjct: 244 LKKFLRSHRAIPKEEKDFITMLHGMNLSAGRIMKLMSELYGGARNVPYTRKDISNFKSKL 303
Query: 214 RTKMKNAD----AEMLENVYNDYGNLLEEIAIDSSE 245
++ + D E + D N +I +D +
Sbjct: 304 GSEYRCRDIPEPIAHFEEIKKDDPNFFYKIQLDKED 339
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.131 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 18,049,840
Number of extensions: 776610
Number of successful extensions: 2449
Number of sequences better than 1.0e-10: 34
Number of HSP's gapped: 2447
Number of HSP's successfully gapped: 37
Length of query: 503
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 398
Effective length of database: 11,553,331
Effective search space: 4598225738
Effective search space used: 4598225738
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)