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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os08g0143800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : FAR1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.06 (0.0187) R2 : 0.0099
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0839 (0.0393) R2dN8 : 0.0128 R2N8 : 0.0099
σ : 0.351
deviance : 56.69
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
53.55 0.344 3.06 0.0687 0.204 -0.146 -0.257 -0.564 0.0717 6.02 70.33 4640 -- --
53.98 0.342 3.07 0.0598 0.21 -0.161 -0.335 -- 0.063 5.77 70.99 4708 -- --
53.59 0.341 3.07 0.0739 0.205 -0.128 -- -0.677 0.0713 6.25 70 6126 -- --
54.13 0.343 3.07 0.0479 0.202 -0.172 -- -- 0.0286 6.08 73 7414 -- --
55.58 0.347 3.07 0.0752 -- -0.112 -- -0.661 0.0762 -- 70 5846 -- --
54.5 0.346 3.06 0.0354 0.195 -- -0.295 -- 0.0826 5.97 -- -- -- --
54.69 0.346 3.06 0.0335 0.194 -- -- -- 0.084 6.34 -- -- -- --
55.97 0.348 3.08 0.0667 -- -0.188 -- -- 0.0171 -- 81 7138 -- --
54.19 0.343 3.07 -- 0.204 -0.175 -- -- 0.0287 6.25 73.02 7419 -- --
56.65 0.352 3.06 0.0386 -- -- -- -- 0.0882 -- -- -- -- --
54.72 0.346 3.06 -- 0.195 -- -- -- 0.0803 6.33 -- -- -- --
56.08 0.349 3.08 -- -- -0.191 -- -- 0.00653 -- 81.02 7111 -- --
56.69 0.351 3.06 -- -- -- -- -- 0.0839 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 49.14 temperature 20.0 30 > th dose dependent rect. 2 1
2 49.16 atmosphere 1000.0 30 > th dose independent rect. 2 1
3 49.16 atmosphere 1000.0 30 > th dose dependent rect. 2 1
5 49.18 temperature 20.0 30 > th dose independent rect. 2 1
10 49.23 humidity 80.0 30 > th dose independent rect. 2 1
11 49.25 wind 5.0 30 < th dose independent rect. 2 1
13 49.25 wind 7.0 30 < th dose dependent rect. 2 1
16 49.26 humidity 50.0 30 > th dose dependent rect. 2 1
20 49.27 temperature 10.0 30 > th dose independent rect. 2 1
22 49.27 temperature 30.0 30 < th dose independent rect. 2 1
23 49.27 humidity 50.0 30 > th dose independent rect. 2 1
27 49.27 atmosphere 1010.0 30 < th dose independent rect. 2 1
29 49.27 radiation 1.0 30 < th dose independent rect. 2 1
34 49.27 precipitation 0.1 30 < th dose independent rect. 2 1
35 49.27 temperature 10.0 30 > th dose independent rect. 3 23
37 49.27 radiation 1.0 30 < th dose dependent rect. 2 1
42 49.27 precipitation 0.1 30 < th dose dependent rect. 2 1
47 49.51 atmosphere 1015.0 30 < th dose dependent rect. 2 1
48 49.53 temperature 30.0 30 < th dose dependent rect. 2 1
50 49.64 wind 1.0 30 > th dose independent rect. 2 1
67 50.21 atmosphere 1005.0 90 > th dose dependent rect. 1 6
68 50.22 atmosphere 1005.0 10 > th dose dependent rect. 2 6
70 50.24 radiation 1.0 4320 < th dose dependent rect. 3 1
88 50.30 wind 9.0 1440 < th dose independent rect. 3 1
89 50.30 temperature 10.0 1440 > th dose independent rect. 3 1
92 50.30 temperature 30.0 1440 < th dose independent rect. 3 1
96 50.30 humidity 50.0 1440 > th dose independent rect. 3 1
105 50.30 atmosphere 995.0 1440 > th dose independent rect. 3 1
106 50.30 radiation 1.0 1440 < th dose independent rect. 3 1
126 50.30 temperature 10.0 1440 > th dose independent rect. 4 23
172 50.79 wind 9.0 30 < th dose independent rect. 3 23
179 51.10 temperature 25.0 90 > th dose independent rect. 1 3
180 51.11 humidity 90.0 90 < th dose independent rect. 1 6
181 51.11 temperature 25.0 90 > th dose dependent rect. 1 3
182 51.12 atmosphere 1000.0 30 > th dose independent rect. 3 23
184 51.16 precipitation 0.1 30 < th dose independent rect. 3 23
185 51.16 atmosphere 1005.0 270 > th dose dependent rect. 1 3
186 51.16 precipitation 0.1 30 < th dose dependent rect. 3 23
209 51.49 atmosphere 995.0 720 > th dose independent rect. 7 8
219 51.60 temperature 20.0 30 > th dose dependent rect. 2 5
221 51.63 precipitation 0.1 720 < th dose independent rect. 19 8
224 51.63 precipitation 0.1 720 < th dose dependent rect. 19 8
230 51.71 precipitation 0.1 720 < th dose independent rect. 15 16
233 51.71 precipitation 0.1 720 < th dose dependent rect. 15 16
234 51.72 wind 9.0 720 < th dose independent rect. 19 8
235 51.72 temperature 10.0 720 > th dose independent rect. 7 8
236 51.72 atmosphere 1015.0 720 < th dose independent rect. 7 8
237 51.72 temperature 10.0 720 > th dose independent rect. 15 16
245 51.82 temperature 10.0 720 > th dose independent rect. 19 8
246 51.82 temperature 30.0 720 < th dose independent rect. 19 8
247 51.82 humidity 50.0 720 > th dose independent rect. 19 8
248 51.82 atmosphere 995.0 720 > th dose independent rect. 19 8
249 51.82 radiation 1.0 720 < th dose independent rect. 19 8
254 51.82 temperature 10.0 720 > th dose independent rect. 3 16
255 51.82 radiation 1.0 720 < th dose dependent rect. 19 8
260 51.84 atmosphere 995.0 720 > th dose independent rect. 3 16
261 51.85 atmosphere 995.0 720 > th dose independent rect. 15 16
265 51.86 wind 3.0 30 < th dose dependent rect. 2 6
286 52.03 precipitation 0.1 720 < th dose independent rect. 7 8
287 52.03 humidity 50.0 30 > th dose independent rect. 3 23
288 52.03 precipitation 0.1 720 < th dose dependent rect. 7 8
290 52.05 atmosphere 1000.0 10 > th dose independent rect. 8 18
307 52.15 atmosphere 1005.0 10 > th dose independent rect. 2 6
314 52.18 radiation 40.0 720 < th dose independent rect. 15 16
322 52.22 wind 3.0 30 < th dose independent rect. 2 6
363 52.33 humidity 90.0 90 < th dose independent rect. 2 1
373 52.36 atmosphere 995.0 720 > th dose independent rect. 23 16
382 52.40 atmosphere 995.0 10 > th dose dependent rect. 8 18
399 52.46 atmosphere 1015.0 720 < th dose independent rect. 3 16
414 52.51 precipitation 0.1 10 < th dose independent rect. 2 6
415 52.51 humidity 50.0 30 > th dose independent rect. 8 18
416 52.51 precipitation 0.1 10 < th dose dependent rect. 2 6
419 52.52 precipitation 0.1 10 < th dose independent rect. 8 18
424 52.52 precipitation 0.1 10 < th dose dependent rect. 8 18
428 52.54 temperature 25.0 1440 < th dose independent rect. 1 1
430 52.54 temperature 10.0 10 > th dose independent rect. 2 6
432 52.54 temperature 30.0 10 < th dose independent rect. 2 6
433 52.54 humidity 50.0 10 > th dose independent rect. 2 6
435 52.54 atmosphere 995.0 10 > th dose independent rect. 2 6
436 52.54 atmosphere 1015.0 10 < th dose independent rect. 2 6
437 52.54 temperature 10.0 10 > th dose independent rect. 8 18
444 52.55 wind 9.0 720 < th dose independent rect. 15 16
447 52.56 wind 9.0 4320 < th dose independent rect. 3 6
469 52.58 temperature 30.0 30 < th dose independent rect. 3 23
480 52.59 radiation 40.0 10 < th dose independent rect. 2 6
484 52.60 temperature 10.0 1440 > th dose independent rect. 3 6
487 52.60 humidity 50.0 1440 > th dose independent rect. 3 6
489 52.60 atmosphere 995.0 1440 > th dose independent rect. 3 6
492 52.60 wind 9.0 10 < th dose independent rect. 8 18
494 52.60 temperature 10.0 1440 > th dose independent rect. 9 18
509 52.63 wind 3.0 30 < th dose dependent rect. 2 3
525 52.66 wind 9.0 720 < th dose independent rect. 7 8
526 52.66 wind 1.0 30 > th dose independent rect. 8 18
530 52.67 wind 1.0 10 > th dose independent rect. 7 23
545 52.69 temperature 10.0 720 > th dose independent rect. 15 8
547 52.69 temperature 10.0 720 > th dose independent rect. 23 16
550 52.69 wind 3.0 30 < th dose dependent rect. 2 11
551 52.70 radiation 20.0 10 < th dose independent rect. 2 6
553 52.70 atmosphere 1005.0 90 > th dose dependent rect. 6 1
558 52.71 wind 1.0 90 > th dose independent rect. 1 6
561 52.71 temperature 30.0 30 < th dose independent rect. 8 18
571 52.72 radiation 40.0 10 < th dose dependent rect. 2 6
574 52.73 atmosphere 995.0 90 > th dose independent rect. 7 23
581 52.74 atmosphere 1005.0 10 > th dose dependent rect. 6 2
607 52.77 precipitation 0.1 720 < th dose independent rect. 3 16
615 52.77 precipitation 0.1 720 < th dose dependent rect. 3 16
619 52.78 radiation 10.0 30 > th dose independent rect. 17 14
622 52.78 radiation 10.0 30 > th dose dependent rect. 17 14
628 52.79 precipitation 0.1 720 < th dose independent rect. 15 8
631 52.79 precipitation 0.1 720 < th dose dependent rect. 15 8
640 52.81 radiation 10.0 10 > th dose independent rect. 6 1
681 52.81 radiation 10.0 10 > th dose dependent rect. 6 1
720 52.83 temperature 10.0 720 > th dose independent rect. 3 8
721 52.83 atmosphere 995.0 720 > th dose independent rect. 3 8
723 52.83 temperature 10.0 720 > th dose independent rect. 11 16
761 52.84 wind 3.0 30 < th dose dependent rect. 6 1
780 52.85 atmosphere 1015.0 10 < th dose independent rect. 8 18
782 52.85 humidity 90.0 90 < th dose dependent rect. 2 5
803 52.86 temperature 10.0 30 > th dose dependent rect. 8 18
867 52.91 temperature 30.0 1440 < th dose independent rect. 3 5
891 52.92 temperature 30.0 720 < th dose independent rect. 15 16
894 52.92 humidity 80.0 30 > th dose dependent rect. 6 1
897 52.92 temperature 25.0 720 > th dose dependent rect. 7 2
910 52.93 temperature 25.0 720 > th dose dependent rect. 3 6
934 52.95 wind 1.0 90 > th dose independent rect. 6 1
935 52.95 humidity 90.0 90 < th dose independent rect. 6 1
939 52.95 temperature 30.0 30 < th dose dependent rect. 6 1
943 52.96 radiation 40.0 1440 < th dose independent rect. 7 1
945 52.96 precipitation 0.1 720 < th dose independent rect. 11 16
952 52.96 precipitation 0.1 720 < th dose dependent rect. 11 16
953 52.97 wind 9.0 4320 < th dose independent rect. 7 1
976 52.99 wind 3.0 90 < th dose independent rect. 6 1
979 52.99 humidity 50.0 720 > th dose independent rect. 7 8