BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0156700 Os08g0156700|AK070710
(243 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0156700 Similar to VAP27 405 e-113
Os04g0534400 Major sperm protein domain containing protein 232 2e-61
Os02g0643000 Similar to VAP27 229 1e-60
Os08g0155100 Major sperm protein domain containing protein 223 1e-58
Os10g0507600 Major sperm protein domain containing protein 167 5e-42
Os01g0936800 PapD-like domain containing protein 164 4e-41
Os04g0554200 Major sperm protein domain containing protein 152 2e-37
Os05g0373000 Major sperm protein domain containing protein 146 1e-35
Os10g0549100 Major sperm protein domain containing protein 145 3e-35
Os02g0661900 Similar to Vesicle-associated membrane protein... 129 2e-30
Os11g0274300 Protein kinase-like domain containing protein 119 2e-27
Os02g0652550 Major sperm protein domain containing protein 108 4e-24
Os10g0200000 Protein kinase-like domain containing protein 89 3e-18
Os04g0369000 Major sperm protein domain containing protein 84 1e-16
AK109135 74 1e-13
>Os08g0156700 Similar to VAP27
Length = 243
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/243 (83%), Positives = 204/243 (83%)
Query: 1 MASPGPATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRP 60
MASPGPATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRP
Sbjct: 1 MASPGPATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRP 60
Query: 61 NTGVVLPRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGN 120
NTGVVLPRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGN
Sbjct: 61 NTGVVLPRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGN 120
Query: 121 KVEEVKLRVTYIAXXXXXXXXXXXXXXXXXXXXXXXXNGDSLGGGFTRALRERIEPQENS 180
KVEEVKLRVTYIA NGDSLGGGFTRALRERIEPQENS
Sbjct: 121 KVEEVKLRVTYIAPPQPPSPVPEESEEGSPSRVSESENGDSLGGGFTRALRERIEPQENS 180
Query: 181 LEAGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFSXXXXXXXXXXXXXXXYM 240
LEAGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFS YM
Sbjct: 181 LEAGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFSFIIVIIVALIGIFLGYM 240
Query: 241 MKS 243
MKS
Sbjct: 241 MKS 243
>Os04g0534400 Major sperm protein domain containing protein
Length = 250
Score = 232 bits (592), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 126/246 (51%), Positives = 152/246 (61%), Gaps = 17/246 (6%)
Query: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRST 70
ELL I+P+ELRF FE KKQISCSMQL+N +DDYIAFKVKTTSPKKY VRPN+G+V PRST
Sbjct: 7 ELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPRST 66
Query: 71 CDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVT 130
DV+VTMQAQREAP DMQCKDKFLVQSV+ G T KD+TGEMF K SGN V+E KL+V
Sbjct: 67 SDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLKVV 126
Query: 131 YIAXXXXXXXXXXXXXXXXXXXXXXXXNGDSLGGGFTRALRERIEPQ------------- 177
Y+ G+ + RE EP
Sbjct: 127 YVQPPRPPSPVREGSEEGSSPRASLSEGGNL---NYQDTTRESDEPPLLSATRAHKDAED 183
Query: 178 -ENSLEAGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFSXXXXXXXXXXXXX 236
+ E ALI++L EE+NSAIQQN+K+ +E+D++RREISK+ GGF
Sbjct: 184 VTSDSETSALISRLTEERNSAIQQNNKLLEEMDLVRREISKQNGGFPFVFVVVVALLGIL 243
Query: 237 XXYMMK 242
Y+MK
Sbjct: 244 LGYIMK 249
>Os02g0643000 Similar to VAP27
Length = 259
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 148/217 (68%), Gaps = 22/217 (10%)
Query: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRST 70
ELL IDP EL FPFELKKQISCS+ L+N +D+Y+ FKVKTTSPKKY VRPN G+V P+ST
Sbjct: 41 ELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQST 100
Query: 71 CDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVT 130
+V+VTMQAQREAPPDMQCKDKFLVQS I +T KDITG+MFTKESGN V+EVKL+V
Sbjct: 101 SNVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLKVV 160
Query: 131 YIAXXXXXXXXXXXXXXXXXXXXXXXXNGDSLGG----GFTRALRERIEPQENSLEAGAL 186
Y NG S G + A + E + + E AL
Sbjct: 161 Y------------------TQPHPTSLNGGSEEGLGSLSYQEATKGSRESETVTSEPLAL 202
Query: 187 INKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFS 223
I+KL EEK+SAIQQN K+R+ELD++RR++ + GGFS
Sbjct: 203 ISKLKEEKSSAIQQNMKLREELDLLRRQMGSQHGGFS 239
>Os08g0155100 Major sperm protein domain containing protein
Length = 237
Score = 223 bits (568), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 117/216 (54%), Positives = 137/216 (63%), Gaps = 2/216 (0%)
Query: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
+ L I P EL FPFEL KQ SCSMQL+N +D Y+AFKVKTT+PK+Y VRPN GVVLP
Sbjct: 2 SASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPG 61
Query: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLR 128
STCDV VTMQAQREAPPDMQCKDKFLVQSV A +G T +DI+ EMF K +G VEE KLR
Sbjct: 62 STCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLR 121
Query: 129 VTYIAXXXXXXXXXXXXXXXXXXXXXXXXNGDSLGGGFTRALRERIEP-QENSLEAGALI 187
V Y+ NG R EP +E E ++I
Sbjct: 122 VVYVP-TTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMI 180
Query: 188 NKLNEEKNSAIQQNHKIRQELDMMRREISKKRGGFS 223
+KLNEE AIQQN K+R EL+++R+E SK GGFS
Sbjct: 181 SKLNEENRVAIQQNQKLRHELELLRKESSKSSGGFS 216
>Os10g0507600 Major sperm protein domain containing protein
Length = 240
Score = 167 bits (424), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 78/126 (61%), Positives = 100/126 (79%)
Query: 7 ATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVL 66
A + +L+ +DP EL+FPFEL KQISC ++++N ++ +AFKVKTTSPKKY VRPN GVV
Sbjct: 2 AASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGVVR 61
Query: 67 PRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVK 126
PRS VVVTMQAQ APPD+QCKDKFLVQSV+ G++ KDIT +MF ++ N VEEVK
Sbjct: 62 PRSASVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVK 121
Query: 127 LRVTYI 132
L+V+Y+
Sbjct: 122 LKVSYV 127
>Os01g0936800 PapD-like domain containing protein
Length = 380
Score = 164 bits (416), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 76/123 (61%), Positives = 95/123 (77%)
Query: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRST 70
+L I P EL+F FE+KKQ SC++ L N S++Y+AFKVKTTSPK+Y VRPNTGV+LPRST
Sbjct: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRST 63
Query: 71 CDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVT 130
CD VTMQAQR APPDMQ KDKFLVQ+ + P G + +D+ F+KESG +EE KLRV
Sbjct: 64 CDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVV 123
Query: 131 YIA 133
++
Sbjct: 124 LVS 126
>Os04g0554200 Major sperm protein domain containing protein
Length = 244
Score = 152 bits (385), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/218 (37%), Positives = 124/218 (56%), Gaps = 6/218 (2%)
Query: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
+ LLR+ P EL+ P+E K++ SC MQL+N ++ Y+AFKVKTT+P+KYSVR G++ PR
Sbjct: 2 SNTLLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPPR 61
Query: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLR 128
S+CD+ VTMQA E D CKDKFLVQSV G T++D E+FTK G +EE KLR
Sbjct: 62 SSCDITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKLR 121
Query: 129 VTYIAXX--XXXXXXXXXXXXXXXXXXXXXXNGDSLGGGF----TRALRERIEPQENSLE 182
V Y+A +G + F L +R + +S E
Sbjct: 122 VVYVAANPPSPVPEEEEEEEEDASPQSEVMSHGVKMTSVFDAVTVSTLTDRSADKVSSAE 181
Query: 183 AGALINKLNEEKNSAIQQNHKIRQELDMMRREISKKRG 220
++ + L E+ +++N K++Q+++++R S ++G
Sbjct: 182 GVSVESMLVAEREYPVEENQKLQQQMELLRAARSSQQG 219
>Os05g0373000 Major sperm protein domain containing protein
Length = 477
Score = 146 bits (368), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/122 (55%), Positives = 88/122 (72%)
Query: 12 LLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRSTC 71
L+ I P E+RF FE+KK+ SC + L N S++Y+AFKVKTTSPK+Y VRPN GV+LPR+TC
Sbjct: 8 LVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNVGVILPRATC 67
Query: 72 DVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLRVTY 131
V MQAQ APPD+Q +DKFLVQ+ + P G +DI F+KE G +EE KLRV
Sbjct: 68 VFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEENKLRVVL 127
Query: 132 IA 133
++
Sbjct: 128 VS 129
>Os10g0549100 Major sperm protein domain containing protein
Length = 233
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 121/217 (55%), Gaps = 18/217 (8%)
Query: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
+G L+ I P +L F FEL K C++++ N S+ ++AFKVKTTSP+KY VRPN ++ P
Sbjct: 4 SGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASIIQPW 63
Query: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLR 128
+C + +T+QAQ+E PPDMQCKDKFL+QS + + +I F KE +EE+KL+
Sbjct: 64 DSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEMKLK 123
Query: 129 VTYIAXXXXXXXXXXXXXXXXXXXXXXXXNGDSLGG-GFTRALRERIEPQENSLEAGALI 187
V Y SLG F + + S+E I
Sbjct: 124 VVYTVPSGSSDDSGIT----------------SLGSRSFKLGSDDLTMLKNASIEKIQTI 167
Query: 188 NKLNEEKNSAIQQNHKIRQELDMMRREISKKR-GGFS 223
+L +E+++ +QQN ++++ELD++RR S+K GFS
Sbjct: 168 QRLKDERDTTLQQNQQMQRELDVIRRRRSRKSDAGFS 204
>Os02g0661900 Similar to Vesicle-associated membrane protein-associated protein
B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C)
(VAP-B/VAP-C). Splice isoform 2
Length = 106
Score = 129 bits (324), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 78/105 (74%)
Query: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
+ LLRI P EL+ PFELK+Q S ++L+N +D ++AFKVKTT+P+KYSVRP TG+VLPR
Sbjct: 2 SNTLLRIYPSELKIPFELKRQNSGILELTNKTDHHVAFKVKTTNPRKYSVRPTTGIVLPR 61
Query: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEM 113
+C + ++MQ +E P D CKDKFL+QSV+ G T KDI +M
Sbjct: 62 GSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDIHSDM 106
>Os11g0274300 Protein kinase-like domain containing protein
Length = 693
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 80/122 (65%), Gaps = 4/122 (3%)
Query: 15 IDPV-ELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRSTCDV 73
+DPV ELRFPFE+KK ISC +QL+N +D +IAF K KKYS +PN G + P S+C V
Sbjct: 567 LDPVRELRFPFEVKKDISCCLQLTNQTDYFIAFNTKANQ-KKYSTQPNKGTIAPWSSCYV 625
Query: 74 VVTMQAQREAPPDMQCKDKFLVQSVIAPSGV--TVKDITGEMFTKESGNKVEEVKLRVTY 131
VTM+AQ APP +QC D F+VQS + +DIT E+F K G V+E KL + Y
Sbjct: 626 TVTMKAQETAPPYLQCHDMFVVQSTRVNEDLEPETEDITEELFKKTMGKVVDEEKLPIVY 685
Query: 132 IA 133
+A
Sbjct: 686 VA 687
>Os02g0652550 Major sperm protein domain containing protein
Length = 120
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 71/109 (65%), Gaps = 10/109 (9%)
Query: 9 AGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPR 68
G L+ I P +L F FEL K C++++ N S+ ++AFKVKTTSP+KY VRPN +V P
Sbjct: 4 GGTLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNANIVQPW 63
Query: 69 STCDVVVTMQAQREAPPDMQCKDKFLVQSV----------IAPSGVTVK 107
+C + +T+QAQ+E P DMQCKDKFL+QS I P V++K
Sbjct: 64 DSCTITITLQAQKEYPQDMQCKDKFLIQSTRVAASTDMDEIPPDTVSIK 112
>Os10g0200000 Protein kinase-like domain containing protein
Length = 478
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 68/112 (60%), Gaps = 2/112 (1%)
Query: 11 ELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRST 70
E+L ++P+EL FP + +++ SCSM L N + Y+A+K+ Y + P +G++ P+ T
Sbjct: 352 EILSVNPLELWFPMKAQEEFSCSMLLKNKTHHYVAYKINAQKLNIYRIEPCSGLISPQFT 411
Query: 71 CDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKV 122
C++ V MQAQ+ P+MQ D+ LVQSV+ + DI ++ K+ G V
Sbjct: 412 CNISVRMQAQQGVSPNMQLMDRILVQSVVVSDDLI--DIAKDLSCKQKGKLV 461
>Os04g0369000 Major sperm protein domain containing protein
Length = 137
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 71/126 (56%), Gaps = 5/126 (3%)
Query: 10 GELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRS 69
E L IDP+E+RFPFE + +SC +QL+N S D +AF V+ KY P+ GVV PRS
Sbjct: 8 SERLVIDPLEVRFPFEKDRDVSCVLQLTNRSADRVAFAVQVDE-SKYRAVPDRGVVQPRS 66
Query: 70 TCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKV--EEVKL 127
+V T +AQ AP ++Q D FL++S + D E F K G V E ++L
Sbjct: 67 RRYIVATSRAQASAPTNLQRDDSFLLRSKRVEG--SADDDFAEDFEKLMGKAVDGETMRL 124
Query: 128 RVTYIA 133
V YIA
Sbjct: 125 PVVYIA 130
>AK109135
Length = 294
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 13 LRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVLPRSTCD 72
L+I P +L F K I+ S++L+N S + +++KVKTT+PK+Y V+PNTG + P + +
Sbjct: 6 LKISPADLVFLPPFTKPINNSIKLTNTSTEALSYKVKTTAPKRYCVKPNTGTISPNESVE 65
Query: 73 VVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVKLR 128
V +T+ ++ P + + DKF +Q + P T D+ ++++ +V + KLR
Sbjct: 66 VTITLNFTKDPPANPKVADKFQIQCI--PVTDTTADL-KTLWSRVPKEQVLKYKLR 118
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,562,607
Number of extensions: 220560
Number of successful extensions: 430
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 426
Number of HSP's successfully gapped: 15
Length of query: 243
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 145
Effective length of database: 11,918,829
Effective search space: 1728230205
Effective search space used: 1728230205
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 154 (63.9 bits)