Os10g0507600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major sperm protein domain containing protein.
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Os10g0507600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major sperm protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 18.82 | 0.204 | 13.4 | -0.787 | 0.274 | 0.489 | 0.556 | -0.85 | -0.108 | 3.22 | 22.6 | 1876 | -- | -- |
| 20.41 | 0.21 | 13.4 | -0.498 | 0.272 | 0.505 | 0.584 | -- | -0.0255 | 3.21 | 22.2 | 1889 | -- | -- |
| 19.71 | 0.207 | 13.4 | -0.816 | 0.286 | 0.485 | -- | -0.877 | -0.119 | 3.65 | 22.5 | 1869 | -- | -- |
| 21.38 | 0.215 | 13.4 | -0.515 | 0.289 | 0.505 | -- | -- | -0.0337 | 3.84 | 22.2 | 1889 | -- | -- |
| 24.06 | 0.228 | 13.4 | -0.793 | -- | 0.5 | -- | -0.846 | -0.11 | -- | 22.5 | 1998 | -- | -- |
| 29.94 | 0.257 | 13.3 | -0.299 | 0.277 | -- | 0.559 | -- | 0.145 | 3.07 | -- | -- | -- | -- |
| 30.89 | 0.26 | 13.3 | -0.311 | 0.286 | -- | -- | -- | 0.142 | 3.59 | -- | -- | -- | -- |
| 25.25 | 0.234 | 13.4 | -0.478 | -- | 0.504 | -- | -- | -0.022 | -- | 22.25 | 1192 | -- | -- |
| 27.49 | 0.244 | 13.4 | -- | 0.299 | 0.361 | -- | -- | 0.0349 | 3.9 | 22.5 | 1863 | -- | -- |
| 35.44 | 0.278 | 13.3 | -0.299 | -- | -- | -- | -- | 0.149 | -- | -- | -- | -- | -- |
| 33.44 | 0.27 | 13.3 | -- | 0.28 | -- | -- | -- | 0.176 | 3.6 | -- | -- | -- | -- |
| 30.53 | 0.257 | 13.4 | -- | -- | 0.386 | -- | -- | 0.0616 | -- | 22.4 | 1005 | -- | -- |
| 37.8 | 0.287 | 13.3 | -- | -- | -- | -- | -- | 0.182 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 18.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 3 | 18.66 | temperature | 15 | 720 | > th | dose dependent | rect. | 17 | 20 |
| 4 | 18.67 | humidity | 70 | 43200 | < th | dose dependent | rect. | 5 | 7 |
| 7 | 18.68 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 19 |
| 10 | 18.70 | temperature | 15 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 18 | 18.77 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 19 | 18.78 | radiation | 30 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 22 | 18.79 | radiation | 1 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 25 | 18.79 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 17 |
| 30 | 18.82 | humidity | 80 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 38 | 18.83 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 54 | 18.87 | radiation | 30 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 57 | 18.87 | humidity | 70 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 64 | 18.89 | humidity | 70 | 43200 | < th | dose independent | rect. | 4 | 7 |
| 69 | 18.90 | humidity | 70 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 70 | 18.90 | radiation | 1 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 79 | 18.91 | radiation | 1 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 82 | 18.91 | wind | 3 | 43200 | < th | dose dependent | rect. | 20 | 2 |
| 89 | 18.93 | humidity | 60 | 43200 | < th | dose dependent | rect. | 19 | 21 |
| 102 | 18.94 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 23 |
| 103 | 18.94 | humidity | 60 | 43200 | < th | dose dependent | rect. | 16 | 23 |
| 105 | 18.95 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 3 |
| 114 | 18.95 | humidity | 60 | 43200 | < th | dose dependent | rect. | 4 | 18 |
| 126 | 18.96 | humidity | 70 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 127 | 18.96 | humidity | 60 | 43200 | < th | dose dependent | sin | 1 | NA |
| 130 | 18.96 | radiation | 10 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 172 | 18.97 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 173 | 18.97 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 7 |
| 175 | 18.97 | humidity | 60 | 43200 | < th | dose dependent | no | NA | NA |
| 236 | 18.98 | humidity | 60 | 43200 | < th | dose dependent | rect. | 13 | 23 |
| 242 | 18.99 | humidity | 70 | 43200 | > th | dose independent | rect. | 5 | 5 |
| 246 | 18.99 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 7 |
| 303 | 19.01 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 2 |
| 304 | 19.01 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 3 |
| 307 | 19.01 | humidity | 60 | 43200 | > th | dose independent | rect. | 19 | 17 |
| 323 | 19.01 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 22 |
| 328 | 19.02 | humidity | 60 | 43200 | < th | dose independent | rect. | 19 | 18 |
| 342 | 19.03 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 343 | 19.03 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 2 |
| 396 | 19.05 | humidity | 60 | 43200 | < th | dose dependent | rect. | 11 | 12 |
| 409 | 19.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 432 | 19.07 | humidity | 70 | 43200 | < th | dose dependent | sin | 7 | NA |
| 450 | 19.08 | humidity | 70 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 498 | 19.12 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 5 |
| 514 | 19.13 | humidity | 90 | 14400 | > th | dose dependent | sin | 10 | NA |
| 518 | 19.13 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 7 |
| 523 | 19.13 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 526 | 19.14 | humidity | 60 | 43200 | < th | dose independent | sin | 7 | NA |
| 535 | 19.14 | humidity | 90 | 14400 | > th | dose dependent | rect. | 24 | 11 |
| 541 | 19.14 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 567 | 19.16 | wind | 5 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 584 | 19.17 | humidity | 60 | 43200 | > th | dose independent | sin | 7 | NA |
| 598 | 19.17 | humidity | 90 | 14400 | > th | dose dependent | rect. | 1 | 9 |
| 604 | 19.17 | radiation | 20 | 14400 | > th | dose dependent | rect. | 17 | 14 |
| 613 | 19.17 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 19 |
| 644 | 19.19 | wind | 3 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 689 | 19.20 | humidity | 70 | 43200 | < th | dose dependent | rect. | 17 | 5 |
| 719 | 19.21 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 722 | 19.21 | radiation | 20 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 723 | 19.21 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |
| 834 | 19.24 | wind | 5 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 893 | 19.25 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 941 | 19.26 | wind | 3 | 43200 | > th | dose dependent | rect. | 14 | 3 |
| 975 | 19.27 | humidity | 50 | 43200 | > th | dose independent | rect. | 14 | 21 |