BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0507600 Os10g0507600|AK058656
(240 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0507600 Major sperm protein domain containing protein 431 e-121
Os02g0643000 Similar to VAP27 172 3e-43
Os08g0156700 Similar to VAP27 171 5e-43
Os04g0534400 Major sperm protein domain containing protein 157 5e-39
Os08g0155100 Major sperm protein domain containing protein 150 7e-37
Os01g0936800 PapD-like domain containing protein 124 5e-29
Os05g0373000 Major sperm protein domain containing protein 119 2e-27
Os10g0549100 Major sperm protein domain containing protein 116 2e-26
Os04g0554200 Major sperm protein domain containing protein 102 2e-22
Os02g0661900 Similar to Vesicle-associated membrane protein... 98 5e-21
Os11g0274300 Protein kinase-like domain containing protein 92 4e-19
Os02g0652550 Major sperm protein domain containing protein 90 1e-18
Os10g0200000 Protein kinase-like domain containing protein 66 3e-11
>Os10g0507600 Major sperm protein domain containing protein
Length = 240
Score = 431 bits (1109), Expect = e-121, Method: Compositional matrix adjust.
Identities = 216/240 (90%), Positives = 216/240 (90%)
Query: 1 MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXX 60
MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNG
Sbjct: 1 MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGVV 60
Query: 61 XXXXXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV 120
TMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV
Sbjct: 61 RPRSASVVVVTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV 120
Query: 121 KLKVSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELG 180
KLKVSYV SDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELG
Sbjct: 121 KLKVSYVMPPEPAMEIAEESDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELG 180
Query: 181 SPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL 240
SPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL
Sbjct: 181 SPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL 240
>Os02g0643000 Similar to VAP27
Length = 259
Score = 172 bits (435), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 128/237 (54%), Gaps = 51/237 (21%)
Query: 4 SCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXX 63
S +L+ +DPPEL FPFEL KQISC L + NKT+ V FKVKTTSPKKYCVRPNNG
Sbjct: 39 SRELLGIDPPELIFPFELKKQISCSLHLTNKTDEYVTFKVKTTSPKKYCVRPNNGIVAPQ 98
Query: 64 XXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLK 123
TMQAQ APPD+QCKDKFLVQS +V L+ KDIT MF ++ N+V+EVKLK
Sbjct: 99 STSNVLVTMQAQREAPPDMQCKDKFLVQSAIVTQELTPKDITGDMFTKESGNVVDEVKLK 158
Query: 124 VSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELGSPL 183
V Y P L+ GSE G++S + A G+
Sbjct: 159 VVYTQ--------------------PHPTSLNG---GSEEGLGSLSYQEATKGS------ 189
Query: 184 GRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL 240
E T+ P+ AL++KL EEK SA++QN KLREEL
Sbjct: 190 -----RESETVTSEPL-----------------ALISKLKEEKSSAIQQNMKLREEL 224
>Os08g0156700 Similar to VAP27
Length = 243
Score = 171 bits (433), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/239 (42%), Positives = 132/239 (55%), Gaps = 37/239 (15%)
Query: 2 AASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXX 61
A + +L+ +DP EL+FPFEL KQISC ++++N ++ +AFKVKTTSPKKY VRPN G
Sbjct: 7 ATAGELLRIDPVELRFPFELKKQISCSMQLSNLSDDYIAFKVKTTSPKKYSVRPNTGVVL 66
Query: 62 XXXXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVK 121
TMQAQ APPD+QCKDKFLVQSV+ G++ KDIT +MF ++ N VEEVK
Sbjct: 67 PRSTCDVVVTMQAQREAPPDMQCKDKFLVQSVIAPSGVTVKDITGEMFTKESGNKVEEVK 126
Query: 122 LKVSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELGS 181
L+V+Y+ S+ E S VS +E G LG
Sbjct: 127 LRVTYIAPPQPPSPVPEESE--------------------EGSPSRVS--ESENGDSLGG 164
Query: 182 PLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLREEL 240
R +R R+ P E LE AL+ KL EEK SA++QN K+R+EL
Sbjct: 165 GFTRALRE-------------RIE--PQENSLEAGALINKLNEEKNSAIQQNHKIRQEL 208
>Os04g0534400 Major sperm protein domain containing protein
Length = 250
Score = 157 bits (398), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 102/239 (42%), Positives = 135/239 (56%), Gaps = 30/239 (12%)
Query: 4 SCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXX 63
S +L+ ++P EL+F FE KQISC +++ N+T+ +AFKVKTTSPKKYCVRPN+G
Sbjct: 5 SKELLGIEPLELRFSFETKKQISCSMQLTNRTDDYIAFKVKTTSPKKYCVRPNSGIVPPR 64
Query: 64 XXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLK 123
TMQAQ AP D+QCKDKFLVQSVVV +G + KD+T +MF + N+V+E KLK
Sbjct: 65 STSDVIVTMQAQREAPADMQCKDKFLVQSVVVTEGTTTKDVTGEMFNKGSGNVVDERKLK 124
Query: 124 VSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELGSPL 183
V YV P R P+ R GSE G+ S G L
Sbjct: 125 VVYVQ--------------PPRPPSPV-------REGSE--EGSSPRASLSEGGNLNYQD 161
Query: 184 GRFVRNEDMLKTASPVVETRVHAGPDE--QYLELSALVAKLTEEKKSALEQNRKLREEL 240
+E L +A TR H ++ E SAL+++LTEE+ SA++QN KL EE+
Sbjct: 162 TTRESDEPPLLSA-----TRAHKDAEDVTSDSETSALISRLTEERNSAIQQNNKLLEEM 215
>Os08g0155100 Major sperm protein domain containing protein
Length = 237
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 126/238 (52%), Gaps = 39/238 (16%)
Query: 4 SCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXX 63
S +++ P EL FPFEL KQ SC +++ NKT+ VAFKVKTT+PK+YCVRPN G
Sbjct: 2 SASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPG 61
Query: 64 XXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLK 123
TMQAQ APPD+QCKDKFLVQSV ++G + +DI+++MF + +VEE KL+
Sbjct: 62 STCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLR 121
Query: 124 VSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSLRSAEMGTELGSPL 183
V YV S +P+ +E GS
Sbjct: 122 VVYV-------PTTTSSAMPE-------------------------------DSEQGSSA 143
Query: 184 GRFVRNEDMLKTASPVVETRVHAGP-DEQYLELSALVAKLTEEKKSALEQNRKLREEL 240
F + + + P R A P E+ E S++++KL EE + A++QN+KLR EL
Sbjct: 144 RPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMISKLNEENRVAIQQNQKLRHEL 201
>Os01g0936800 PapD-like domain containing protein
Length = 380
Score = 124 bits (311), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 62/122 (50%), Positives = 77/122 (63%)
Query: 6 DLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXXXX 65
DL ++ P ELQF FE+ KQ SC + + NK+ VAFKVKTTSPK+YCVRPN G
Sbjct: 4 DLAEIHPRELQFTFEVKKQSSCTVHLVNKSNEYVAFKVKTTSPKRYCVRPNTGVILPRST 63
Query: 66 XXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLKVS 125
TMQAQ APPD+Q KDKFLVQ+ VV G S +D+ F ++ +EE KL+V
Sbjct: 64 CDFTVTMQAQRTAPPDMQLKDKFLVQTTVVPYGTSDEDLVPSYFSKESGRYIEESKLRVV 123
Query: 126 YV 127
V
Sbjct: 124 LV 125
>Os05g0373000 Major sperm protein domain containing protein
Length = 477
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/121 (48%), Positives = 79/121 (65%)
Query: 7 LVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXXXXX 66
LV++ P E++F FE+ K+ SC + + NK+E VAFKVKTTSPK+YCVRPN G
Sbjct: 8 LVEIHPGEIRFEFEVKKKSSCYVCLVNKSEEYVAFKVKTTSPKRYCVRPNVGVILPRATC 67
Query: 67 XXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLKVSY 126
MQAQ++APPDLQ +DKFLVQ+ VV G + +DI F ++ +EE KL+V
Sbjct: 68 VFTVIMQAQMIAPPDLQIRDKFLVQTTVVPFGTADEDIAPAFFSKEVGRYIEENKLRVVL 127
Query: 127 V 127
V
Sbjct: 128 V 128
>Os10g0549100 Major sperm protein domain containing protein
Length = 233
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 116/242 (47%), Gaps = 56/242 (23%)
Query: 1 MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXX 60
M AS L+ + P +L F FELDK C L++ N +E VAFKVKTTSP+KY VRPN
Sbjct: 1 MGASGRLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNASII 60
Query: 61 XXXXXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEV 120
T+QAQ PPD+QCKDKFL+QS V +I F ++ + ++EE+
Sbjct: 61 QPWDSCTITITLQAQKEYPPDMQCKDKFLIQSTKVAASTDMDEIPPNTFNKEVDKVIEEM 120
Query: 121 KLKVSYVXXXXXXXXXXXXSDIPKRILVPMQRILDNGRSGSELSSGNVSL--RSAEMGTE 178
KLKV Y VP SGS SG SL RS ++G++
Sbjct: 121 KLKVVYT--------------------VP---------SGSSDDSGITSLGSRSFKLGSD 151
Query: 179 LGSPLGRFVRNEDMLKTASPVVETRVHAGPDEQYLELSALVAKLTEEKKSALEQNRKLRE 238
+ MLK AS +E + +L +E+ + L+QN++++
Sbjct: 152 ----------DLTMLKNAS---------------IEKIQTIQRLKDERDTTLQQNQQMQR 186
Query: 239 EL 240
EL
Sbjct: 187 EL 188
>Os04g0554200 Major sperm protein domain containing protein
Length = 244
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/121 (42%), Positives = 72/121 (59%)
Query: 7 LVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXXXXX 66
L+ V P EL+ P+E ++ SC +++ NKT + VAFKVKTT+P+KY VR G
Sbjct: 5 LLRVHPSELKIPYEYKRKRSCCMQLTNKTNQYVAFKVKTTNPRKYSVRHACGILPPRSSC 64
Query: 67 XXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQMFLRDENNMVEEVKLKVSY 126
TMQA + D CKDKFLVQSV V G + +D ++F + ++EE KL+V Y
Sbjct: 65 DITVTMQAPVEMLSDYHCKDKFLVQSVAVGYGATMRDFVPELFTKAPGRVIEEFKLRVVY 124
Query: 127 V 127
V
Sbjct: 125 V 125
>Os02g0661900 Similar to Vesicle-associated membrane protein-associated protein
B/C (VAMP- associated protein B/C) (VAMP-B/VAMP-C)
(VAP-B/VAP-C). Splice isoform 2
Length = 106
Score = 98.2 bits (243), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/105 (49%), Positives = 64/105 (60%)
Query: 4 SCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXX 63
S L+ + P EL+ PFEL +Q S L + NKT+ VAFKVKTT+P+KY VRP G
Sbjct: 2 SNTLLRIYPSELKIPFELKRQNSGILELTNKTDHHVAFKVKTTNPRKYSVRPTTGIVLPR 61
Query: 64 XXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGLSAKDITSQM 108
+MQ P D CKDKFL+QSVVV+DG + KDI S M
Sbjct: 62 GSCGITISMQPPKEIPTDYNCKDKFLIQSVVVEDGTTQKDIHSDM 106
>Os11g0274300 Protein kinase-like domain containing protein
Length = 693
Score = 91.7 bits (226), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Query: 7 LVDVDP-PELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXXXX 65
V +DP EL+FPFE+ K ISC L++ N+T+ +AF K KKY +PN G
Sbjct: 564 YVGLDPVRELRFPFEVKKDISCCLQLTNQTDYFIAFNTKANQ-KKYSTQPNKGTIAPWSS 622
Query: 66 XXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGL--SAKDITSQMFLRDENNMVEEVKLK 123
TM+AQ APP LQC D F+VQS V++ L +DIT ++F + +V+E KL
Sbjct: 623 CYVTVTMKAQETAPPYLQCHDMFVVQSTRVNEDLEPETEDITEELFKKTMGKVVDEEKLP 682
Query: 124 VSYV 127
+ YV
Sbjct: 683 IVYV 686
>Os02g0652550 Major sperm protein domain containing protein
Length = 120
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 56/95 (58%)
Query: 1 MAASCDLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXX 60
M L+ + P +L F FELDK C L++ N +E VAFKVKTTSP+KY VRPN
Sbjct: 1 MGGGGTLISIYPEDLTFLFELDKPCYCNLKVVNNSEHHVAFKVKTTSPRKYFVRPNANIV 60
Query: 61 XXXXXXXXXXTMQAQIVAPPDLQCKDKFLVQSVVV 95
T+QAQ P D+QCKDKFL+QS V
Sbjct: 61 QPWDSCTITITLQAQKEYPQDMQCKDKFLIQSTRV 95
>Os10g0200000 Protein kinase-like domain containing protein
Length = 478
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 2/104 (1%)
Query: 6 DLVDVDPPELQFPFELDKQISCPLRIANKTERTVAFKVKTTSPKKYCVRPNNGXXXXXXX 65
+++ V+P EL FP + ++ SC + + NKT VA+K+ Y + P +G
Sbjct: 352 EILSVNPLELWFPMKAQEEFSCSMLLKNKTHHYVAYKINAQKLNIYRIEPCSGLISPQFT 411
Query: 66 XXXXXTMQAQIVAPPDLQCKDKFLVQSVVVDDGL--SAKDITSQ 107
MQAQ P++Q D+ LVQSVVV D L AKD++ +
Sbjct: 412 CNISVRMQAQQGVSPNMQLMDRILVQSVVVSDDLIDIAKDLSCK 455
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.131 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 6,816,676
Number of extensions: 232424
Number of successful extensions: 424
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 422
Number of HSP's successfully gapped: 13
Length of query: 240
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 142
Effective length of database: 11,918,829
Effective search space: 1692473718
Effective search space used: 1692473718
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 154 (63.9 bits)