Os08g0155100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major sperm protein domain containing protein.
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Os08g0155100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major sperm protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.86 | 0.269 | 8.85 | -0.932 | 0.629 | 0.599 | -0.427 | -2.1 | -0.0337 | 4.71 | 12.63 | 1310 | -- | -- |
| 36.3 | 0.281 | 8.79 | -0.466 | 0.633 | 0.58 | -0.608 | -- | 0.0873 | 4.88 | 14.4 | 1143 | -- | -- |
| 33.31 | 0.269 | 8.86 | -0.946 | 0.623 | 0.602 | -- | -2.2 | -0.0358 | 4.65 | 13.41 | 1265 | -- | -- |
| 37.27 | 0.284 | 8.79 | -0.471 | 0.622 | 0.597 | -- | -- | 0.0899 | 4.86 | 13.69 | 1136 | -- | -- |
| 53.43 | 0.34 | 8.86 | -0.942 | -- | 0.759 | -- | -2.08 | -0.04 | -- | 14.06 | 1220 | -- | -- |
| 42.04 | 0.304 | 8.77 | -0.299 | 0.667 | -- | -0.556 | -- | 0.19 | 4.56 | -- | -- | -- | -- |
| 42.84 | 0.307 | 8.77 | -0.295 | 0.662 | -- | -- | -- | 0.193 | 4.44 | -- | -- | -- | -- |
| 57.13 | 0.352 | 8.81 | -0.493 | -- | 0.736 | -- | -- | 0.0792 | -- | 10.59 | 1203 | -- | -- |
| 42.37 | 0.303 | 8.78 | -- | 0.625 | 0.397 | -- | -- | 0.17 | 4.72 | 14.4 | 1137 | -- | -- |
| 66.31 | 0.38 | 8.78 | -0.269 | -- | -- | -- | -- | 0.211 | -- | -- | -- | -- | -- |
| 45.14 | 0.314 | 8.76 | -- | 0.656 | -- | -- | -- | 0.226 | 4.45 | -- | -- | -- | -- |
| 62.74 | 0.369 | 8.79 | -- | -- | 0.532 | -- | -- | 0.164 | -- | 13.04 | 1194 | -- | -- |
| 68.22 | 0.386 | 8.77 | -- | -- | -- | -- | -- | 0.241 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 18 |
| 2 | 31.98 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 20 |
| 3 | 32.08 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 18 |
| 5 | 32.16 | temperature | 10 | 270 | > th | dose dependent | rect. | 24 | 22 |
| 11 | 32.24 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 16 |
| 18 | 32.32 | temperature | 15 | 270 | > th | dose dependent | rect. | 10 | 22 |
| 21 | 32.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 21 |
| 56 | 32.66 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 16 |
| 62 | 32.68 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 6 |
| 63 | 32.69 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 13 |
| 71 | 32.71 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 78 | 32.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 7 | 12 |
| 85 | 32.73 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 10 |
| 234 | 32.83 | temperature | 10 | 43200 | > th | dose independent | rect. | 9 | 4 |
| 370 | 32.91 | temperature | 15 | 1440 | > th | dose dependent | rect. | 11 | 2 |
| 391 | 32.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 14 |
| 392 | 32.92 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 15 |
| 455 | 32.95 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 456 | 32.95 | temperature | 30 | 1440 | < th | dose dependent | sin | 22 | NA |
| 475 | 32.95 | temperature | 15 | 30 | > th | dose dependent | rect. | 3 | 21 |
| 520 | 32.97 | temperature | 15 | 270 | > th | dose dependent | rect. | 12 | 18 |
| 526 | 32.98 | temperature | 15 | 1440 | > th | dose independent | rect. | 4 | 6 |
| 590 | 32.99 | temperature | 10 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 648 | 33.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 22 |
| 684 | 33.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 21 |
| 692 | 33.03 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 723 | 33.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 725 | 33.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 828 | 33.06 | temperature | 15 | 30 | > th | dose dependent | rect. | 1 | 23 |
| 835 | 33.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 870 | 33.07 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |