BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0155100 Os08g0155100|AK069865
(237 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240 224 3e-59
AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240 200 5e-52
AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257 197 5e-51
AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387 166 1e-41
AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150 163 9e-41
AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638 158 2e-39
AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221 145 2e-35
AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267 56 2e-08
AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288 52 2e-07
AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315 49 2e-06
>AT4G00170.1 | chr4:70732-72085 REVERSE LENGTH=240
Length = 239
Score = 224 bits (571), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/197 (59%), Positives = 146/197 (74%), Gaps = 6/197 (3%)
Query: 2 SASFLEIQPSELSFPFELLKQSSCSMQLTNKTD-HYVAFKVKTTNPKQYCVRPNIGVVLP 60
+ + I P+EL FPFEL KQSSCSMQLTNKT VAFKVKTTNP++YCVRPN GVVLP
Sbjct: 3 TGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVVLP 62
Query: 61 GSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
G +C+VTVTMQAQ+EAP DMQCKDKFLVQ+V +G T++++ AEMFNK AG+V+E+FKL
Sbjct: 63 GDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDFKL 122
Query: 121 RVVYVPTTTSSAMPEDSEQGSSARPFAQENGI--HNSTMPQPVFRSSAEPTKERPTEPSS 178
RVVY+P S +PE SE+G+S P A N I ++++ V R + E T E+ +E S
Sbjct: 123 RVVYIPANPPSPVPEGSEEGNS--PMASLNDIASQSASLFDDVSR-TFEETSEKSSEAWS 179
Query: 179 MISKLNEENRVAIQQNQ 195
MISKL EE A QQ+Q
Sbjct: 180 MISKLTEEKTSATQQSQ 196
>AT2G45140.1 | chr2:18611029-18612971 FORWARD LENGTH=240
Length = 239
Score = 200 bits (509), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/195 (54%), Positives = 132/195 (67%), Gaps = 1/195 (0%)
Query: 1 MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLP 60
MS L I P +L FPFEL KQ SCS+ L NKTD+YVAFKVKTTNPK+YCVRPN GVV P
Sbjct: 1 MSNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHP 60
Query: 61 GSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
S+ +V VTMQAQ+EAP D+QCKDKFL+Q V A GAT +D++ EMF+K AG VEE KL
Sbjct: 61 RSSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKL 120
Query: 121 RVVYV-PTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSM 179
RVVYV P S + E SE+GSS R +NG + P F + ++ +E ++
Sbjct: 121 RVVYVAPPRPPSPVREGSEEGSSPRASVSDNGNASDFTAAPRFSADRVDAQDNSSEARAL 180
Query: 180 ISKLNEENRVAIQQN 194
++KL EE A+Q N
Sbjct: 181 VTKLTEEKNSAVQLN 195
>AT3G60600.1 | chr3:22400537-22402408 FORWARD LENGTH=257
Length = 256
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/194 (54%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 2 SASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPG 61
++ L ++P +L FPFEL KQ SCS+ LTNKTD+ VAFKVKTTNPK+YCVRPN GVVLP
Sbjct: 19 NSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVLPR 78
Query: 62 STCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLR 121
STC+V VTMQAQ+EAP DMQCKDKFL+Q V A G T ++++ EMF+K AG VEE KLR
Sbjct: 79 STCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETKLR 138
Query: 122 VVYV-PTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMI 180
V YV P S + E SE+GSS R +NG + + + +E +E ++I
Sbjct: 139 VTYVAPPRPPSPVHEGSEEGSSPRASVSDNGHGSEFSFERFIVDNKAGHQENTSEARALI 198
Query: 181 SKLNEENRVAIQQN 194
+KL EE + AIQ N
Sbjct: 199 TKLTEEKQSAIQLN 212
>AT1G08820.1 | chr1:2821810-2824412 REVERSE LENGTH=387
Length = 386
Score = 166 bits (419), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 79/130 (60%), Positives = 95/130 (73%)
Query: 1 MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLP 60
M+ L+IQP L F +L KQ+SC +QLTN T HYVAFKVKTT+PK+YCVRPN+GVV P
Sbjct: 1 MNMPLLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAP 60
Query: 61 GSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
STC+ TV MQA +E PPDM CKDKFL+QS A T +DI+A MF+K GK +EE KL
Sbjct: 61 KSTCEFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKL 120
Query: 121 RVVYVPTTTS 130
RV VP + S
Sbjct: 121 RVTLVPPSDS 130
>AT2G23830.1 | chr2:10143646-10144511 FORWARD LENGTH=150
Length = 149
Score = 163 bits (412), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 79/127 (62%), Positives = 97/127 (76%)
Query: 5 FLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTC 64
LEI+P L FPFEL KQ SCS+ LTNKTD+ VAFKVKTTN YCVRPN G++LP STC
Sbjct: 6 LLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLILPKSTC 65
Query: 65 DVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVY 124
V VTMQAQ+E P DMQ +KF++QSV A G T ++++ EMF+K +G VVEE KLRV Y
Sbjct: 66 KVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETKLRVTY 125
Query: 125 VPTTTSS 131
V +TT++
Sbjct: 126 VCSTTTN 132
>AT1G51270.3 | chr1:19007577-19011225 FORWARD LENGTH=638
Length = 637
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 81/152 (53%), Positives = 105/152 (69%), Gaps = 1/152 (0%)
Query: 1 MSASFLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLP 60
MS L I P ++ FP EL K+ SCS+ LTNKT++YVAFK KTTN K+Y VRPN+GVVLP
Sbjct: 172 MSDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLP 231
Query: 61 GSTCDVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
S+C+V V MQA +EAP DMQC+DK L Q E T +D+++EMF+K AG EE +L
Sbjct: 232 RSSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRL 291
Query: 121 RVVYV-PTTTSSAMPEDSEQGSSARPFAQENG 151
+V+YV P S + E +E+GSS R +NG
Sbjct: 292 KVMYVTPPQPPSPVQEGTEEGSSPRASVSDNG 323
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 95/148 (64%), Gaps = 1/148 (0%)
Query: 5 FLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTC 64
L ++ FP EL KQ SCS+ LTNKTD+YVAFK +TT PK YCV+P++GVVLP S+C
Sbjct: 6 LLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVLPRSSC 65
Query: 65 DVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVY 124
+V V MQA +EAP D QCKDK L Q E G +++++EMF+K AG VEE +++Y
Sbjct: 66 EVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETIFKIIY 125
Query: 125 V-PTTTSSAMPEDSEQGSSARPFAQENG 151
V P S + E E GSS + G
Sbjct: 126 VAPPQPQSPVQEGLEDGSSPSASVSDKG 153
>AT5G47180.1 | chr5:19161384-19163265 REVERSE LENGTH=221
Length = 220
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 111/192 (57%), Gaps = 30/192 (15%)
Query: 5 FLEIQPSELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTC 64
+ IQP EL F FEL KQS C +++ NKT++YVAFKVKTT+PK+Y VRPN GV+ P +C
Sbjct: 9 LISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDSC 68
Query: 65 DVTVTMQAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVY 124
+ VT+QAQRE PPDMQCKDKFL+QS ++ + F K +GK + E KL+V Y
Sbjct: 69 IIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVSY 128
Query: 125 V-PTTTSSAMPEDSEQGSSARPFAQENGIHNSTMPQPVFRSSAEPTKERPTEPSSMISKL 183
+ P+TT + SE G++ NG S +E S I +L
Sbjct: 129 ITPSTTQRS----SESGAT-------NGDGQS------------------SETISTIQRL 159
Query: 184 NEENRVAIQQNQ 195
EE A++Q Q
Sbjct: 160 KEERDAAVKQTQ 171
>AT5G54110.1 | chr5:21958356-21960367 FORWARD LENGTH=267
Length = 266
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 11 SELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTCDVTVTM 70
S L FP+E KQ +++L N + + AFK +TT PK +RP GV+ PG + TV
Sbjct: 83 SYLYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFK 142
Query: 71 -----QAQREAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVYV 125
+ + P + + K KF + S+ + G + E+F++ +V E LRV+++
Sbjct: 143 FVEHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFI 199
Query: 126 PTTTSSA 132
SA
Sbjct: 200 DADRPSA 206
>AT4G05060.1 | chr4:2590245-2592000 REVERSE LENGTH=288
Length = 287
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 8/135 (5%)
Query: 6 LEIQPS-ELSFPFELLKQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTC 64
L++ PS +L FP+E KQ ++++ N + +VAFK +TT PK +RP ++ PG
Sbjct: 100 LKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAILAPGEEI 159
Query: 65 DVTVTMQAQ----REAPPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKL 120
TV + E P + + KF + S+ + D E+F + V EE +
Sbjct: 160 IATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMK---VPTDYMPELFEEQKDHVSEEQVM 216
Query: 121 RVVYVPTTTSSAMPE 135
RVV++ ++M E
Sbjct: 217 RVVFLDPENPNSMME 231
>AT4G21450.3 | chr4:11426136-11428125 FORWARD LENGTH=315
Length = 314
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 21 KQSSCSMQLTNKTDHYVAFKVKTTNPKQYCVRPNIGVVLPGSTCDVTVTMQAQ----REA 76
KQ ++++ N + +VAFK +TT PK +RP ++ PG T TV + E
Sbjct: 143 KQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAILAPGETIIATVFKFVEPPENNEK 202
Query: 77 PPDMQCKDKFLVQSVAAENGATTQDISAEMFNKVAGKVVEEFKLRVVYV 125
P D + + KF + S+ + D E+F++ V +E LRV+++
Sbjct: 203 PMDQRSRVKFKIMSLKVKG---PMDYVPELFDEQKDDVSKEQILRVIFL 248
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.312 0.125 0.347
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,152,828
Number of extensions: 155374
Number of successful extensions: 395
Number of sequences better than 1.0e-05: 10
Number of HSP's gapped: 389
Number of HSP's successfully gapped: 11
Length of query: 237
Length of database: 11,106,569
Length adjustment: 96
Effective length of query: 141
Effective length of database: 8,474,633
Effective search space: 1194923253
Effective search space used: 1194923253
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 110 (47.0 bits)