Os05g0373000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Major sperm protein domain containing protein.
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Os05g0373000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Major sperm protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 113.94 | 0.502 | 6.18 | 1.63 | 0.553 | 3.45 | -1.12 | 3.79 | 0.372 | 15.2 | 15.3 | 11 | -- | -- |
| 122.34 | 0.519 | 6.25 | 1.1 | 0.581 | 3.28 | -0.0544 | -- | 0.23 | 15.5 | 16.5 | 21 | -- | -- |
| 116.4 | 0.506 | 6.2 | 1.47 | 0.581 | 3.4 | -- | 2.69 | 0.336 | 15.4 | 15.3 | 11 | -- | -- |
| 120.8 | 0.515 | 6.25 | 1.16 | 0.553 | 2.93 | -- | -- | 0.236 | 15.4 | 19.3 | 12 | -- | -- |
| 129 | 0.532 | 6.23 | 1.34 | -- | 3.56 | -- | 2.23 | 0.232 | -- | 17.7 | 12 | -- | -- |
| 245.03 | 0.734 | 6.14 | 1.76 | 1.6 | -- | 0.538 | -- | 0.73 | 14.7 | -- | -- | -- | -- |
| 246.04 | 0.735 | 6.13 | 1.77 | 1.6 | -- | -- | -- | 0.733 | 14.7 | -- | -- | -- | -- |
| 132.16 | 0.535 | 6.27 | 1.02 | -- | 3.43 | -- | -- | 0.133 | -- | 19.4 | 13 | -- | -- |
| 151.2 | 0.573 | 6.29 | -- | 0.416 | 3.65 | -- | -- | 0.0422 | 15.9 | 17 | 3 | -- | -- |
| 395.14 | 0.929 | 6.14 | 1.71 | -- | -- | -- | -- | 0.693 | -- | -- | -- | -- | -- |
| 329.06 | 0.849 | 6.18 | -- | 1.57 | -- | -- | -- | 0.536 | 14.7 | -- | -- | -- | -- |
| 157.1 | 0.584 | 6.3 | -- | -- | 3.94 | -- | -- | -0.0174 | -- | 17.5 | 13 | -- | -- |
| 471.96 | 1.01 | 6.19 | -- | -- | -- | -- | -- | 0.503 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.01 | temperature | 15 | 10 | > th | dose dependent | no | NA | NA |
| 6 | 115.64 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 14 | 119.48 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 16 | 119.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 17 | 119.97 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 19 | 120.20 | temperature | 20 | 30 | > th | dose dependent | rect. | 5 | 23 |
| 22 | 120.57 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 24 | 120.62 | temperature | 30 | 90 | < th | dose dependent | rect. | 7 | 23 |
| 25 | 120.82 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 26 | 120.90 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 28 | 121.01 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 29 | 121.04 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 32 | 121.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 34 | 121.61 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 37 | 122.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 43 | 122.66 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 49 | 123.51 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 67 | 125.44 | temperature | 20 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 81 | 126.32 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 83 | 126.44 | temperature | 20 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 85 | 126.57 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 120 | 129.13 | temperature | 20 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 121 | 129.31 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 127 | 129.71 | temperature | 30 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 144 | 130.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 162 | 131.33 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 20 |
| 245 | 134.13 | temperature | 20 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 346 | 137.19 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 20 |
| 368 | 137.82 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 15 |
| 374 | 137.91 | temperature | 30 | 1440 | < th | dose dependent | rect. | 21 | 15 |
| 475 | 138.95 | temperature | 30 | 1440 | < th | dose dependent | sin | 7 | NA |
| 479 | 138.97 | temperature | 10 | 1440 | > th | dose dependent | sin | 8 | NA |
| 767 | 141.09 | temperature | 30 | 10 | < th | dose dependent | rect. | 5 | 23 |
| 798 | 141.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 4 |
| 848 | 141.47 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 4 |
| 871 | 141.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 6 |
| 903 | 141.72 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 919 | 141.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 23 |