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Os08g0156700

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to VAP27.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 12.5 (0.0129) R2 : 0.00173
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0241 (0.0271) R2dN8 : 0.00224 R2N8 : 0.00173
σ : 0.243
deviance : 27.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
12.47 0.166 12.5 -0.15 0.672 -0.228 0.0824 -0.291 -0.00642 2.47 0.004309 46 -- --
12.76 0.166 12.5 -0.157 0.669 -0.203 -0.101 -- -0.00643 2.53 0.05208 59 -- --
12.47 0.164 12.5 -0.153 0.674 -0.228 -- -0.248 -0.00595 2.48 2.162e-05 48 -- --
12.82 0.167 12.5 -0.161 0.676 -0.234 -- -- -0.0129 2.45 0.009987 49 -- --
14.45 0.177 12.4 -0.0676 -- 0.454 -- -0.199 0.0273 -- 2.375 478 -- --
13.82 0.174 12.5 -0.133 0.482 -- -0.182 -- -0.0019 3.65 -- -- -- --
13.92 0.175 12.5 -0.13 0.481 -- -- -- -0.000882 3.7 -- -- -- --
14.51 0.177 12.5 -0.102 -- 0.452 -- -- 0.0203 -- 2.219 477 -- --
13.46 0.171 12.5 -- 0.677 -0.238 -- -- 0.000908 2.4 0.06 56 -- --
26.75 0.242 12.5 -0.11 -- -- -- -- 0.0119 -- -- -- -- --
14.37 0.177 12.5 -- 0.479 -- -- -- 0.0136 3.7 -- -- -- --
14.78 0.179 12.5 -- -- 0.452 -- -- 0.0298 -- 1.73 479 -- --
27.07 0.243 12.5 -- -- -- -- -- 0.0241 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 11.24 temperature 10.0 10 > th dose dependent rect. 23 6
3 11.27 temperature 10.0 270 > th dose dependent rect. 22 14
4 11.29 temperature 20.0 10 > th dose independent rect. 23 6
5 11.29 temperature 20.0 90 > th dose independent rect. 23 17
6 11.30 radiation 30.0 10 < th dose independent rect. 5 6
7 11.30 precipitation 0.1 270 < th dose independent rect. 16 15
8 11.30 precipitation 0.1 270 < th dose dependent rect. 16 15
9 11.31 temperature 20.0 90 > th dose independent rect. 23 5
10 11.31 wind 9.0 270 < th dose independent rect. 7 9
13 11.33 humidity 50.0 90 > th dose dependent rect. 4 7
16 11.35 temperature 15.0 270 > th dose independent rect. 7 9
19 11.36 radiation 40.0 90 < th dose independent rect. 4 7
27 11.39 temperature 30.0 90 < th dose dependent rect. 4 7
29 11.40 wind 9.0 270 < th dose independent rect. 6 22
32 11.41 temperature 15.0 270 > th dose independent rect. 16 15
35 11.42 temperature 20.0 270 > th dose independent rect. 23 2
36 11.42 temperature 30.0 10 < th dose independent rect. 5 6
39 11.42 humidity 50.0 270 > th dose independent rect. 7 9
40 11.42 precipitation 0.1 270 < th dose independent rect. 7 9
41 11.42 wind 9.0 270 < th dose independent rect. 7 20
43 11.42 radiation 40.0 30 < th dose dependent rect. 5 6
44 11.42 radiation 40.0 270 < th dose dependent rect. 2 9
45 11.42 precipitation 0.1 270 < th dose dependent rect. 7 9
47 11.43 temperature 30.0 90 < th dose independent rect. 4 7
50 11.43 atmosphere 1015.0 270 < th dose independent rect. 7 9
52 11.43 radiation 40.0 270 < th dose independent rect. 16 15
55 11.44 radiation 20.0 270 < th dose dependent rect. 3 5
57 11.44 temperature 30.0 270 < th dose dependent rect. 2 6
59 11.45 radiation 1.0 10 < th dose dependent sin 9 NA
66 11.46 atmosphere 1015.0 270 < th dose independent rect. 8 18
69 11.47 wind 9.0 270 < th dose independent rect. 8 18
71 11.47 temperature 30.0 270 < th dose dependent rect. 3 4
73 11.47 wind 9.0 10 < th dose dependent rect. 5 6
74 11.47 temperature 10.0 270 > th dose dependent rect. 20 7
76 11.48 atmosphere 1015.0 10 < th dose independent rect. 23 6
78 11.48 wind 9.0 270 < th dose independent rect. 16 15
79 11.48 atmosphere 1015.0 270 < th dose independent rect. 7 20
84 11.48 atmosphere 1015.0 270 < th dose dependent rect. 8 6
88 11.49 precipitation 0.1 270 < th dose independent rect. 3 4
89 11.49 radiation 20.0 270 < th dose independent rect. 2 8
90 11.49 atmosphere 995.0 270 > th dose independent rect. 7 9
94 11.49 precipitation 0.1 270 < th dose dependent rect. 3 4
99 11.50 temperature 15.0 270 > th dose dependent rect. 23 2
108 11.51 radiation 20.0 270 < th dose independent rect. 2 6
121 11.53 radiation 1.0 10 > th dose independent sin 9 NA
122 11.53 wind 7.0 270 < th dose independent rect. 3 4
124 11.53 temperature 10.0 270 > th dose independent rect. 3 4
126 11.53 temperature 30.0 270 < th dose independent rect. 3 4
127 11.53 humidity 50.0 270 > th dose independent rect. 3 4
129 11.53 atmosphere 995.0 270 > th dose independent rect. 3 4
130 11.53 atmosphere 1015.0 270 < th dose independent rect. 3 4
133 11.53 precipitation 0.1 270 < th dose independent rect. 2 6
137 11.53 temperature 10.0 270 > th dose independent rect. 7 20
141 11.53 precipitation 0.1 270 < th dose dependent rect. 2 6
147 11.54 precipitation 0.1 270 < th dose independent rect. 4 2
153 11.54 precipitation 0.1 270 < th dose dependent rect. 4 2
161 11.56 wind 7.0 270 < th dose independent rect. 4 2
163 11.56 temperature 10.0 270 > th dose independent rect. 4 2
165 11.56 temperature 30.0 270 < th dose independent rect. 4 2
166 11.56 humidity 50.0 270 > th dose independent rect. 4 2
169 11.56 atmosphere 995.0 270 > th dose independent rect. 4 2
170 11.56 atmosphere 1015.0 270 < th dose independent rect. 4 2
171 11.56 radiation 20.0 270 < th dose independent rect. 4 2
177 11.56 atmosphere 995.0 270 > th dose independent rect. 16 15
178 11.56 atmosphere 1000.0 10 > th dose independent rect. 5 17
179 11.56 wind 9.0 10 < th dose independent rect. 11 18
183 11.56 temperature 10.0 270 > th dose independent rect. 6 22
191 11.57 radiation 1.0 10 < th dose independent sin 9 NA
193 11.57 wind 7.0 270 < th dose independent rect. 2 6
195 11.57 temperature 10.0 270 > th dose independent rect. 2 6
197 11.57 temperature 30.0 270 < th dose independent rect. 2 6
198 11.57 humidity 50.0 270 > th dose independent rect. 2 6
200 11.57 atmosphere 995.0 270 > th dose independent rect. 2 6
201 11.57 atmosphere 1015.0 270 < th dose independent rect. 2 6
204 11.57 temperature 10.0 270 > th dose independent rect. 8 18
206 11.57 radiation 30.0 270 < th dose dependent rect. 4 2
208 11.57 humidity 50.0 270 > th dose dependent rect. 3 4
212 11.58 wind 5.0 10 < th dose independent rect. 5 6
215 11.58 atmosphere 1015.0 10 < th dose independent rect. 9 20
219 11.58 wind 9.0 270 < th dose dependent rect. 3 4
225 11.58 humidity 60.0 90 > th dose dependent rect. 4 9
230 11.59 wind 1.0 270 > th dose independent rect. 7 9
232 11.59 atmosphere 1015.0 270 < th dose independent rect. 22 15
234 11.59 precipitation 0.1 270 < th dose independent rect. 3 16
238 11.59 atmosphere 1015.0 10 < th dose independent rect. 11 18
240 11.59 wind 9.0 10 < th dose independent rect. 9 20
241 11.59 wind 9.0 270 < th dose dependent rect. 4 2
244 11.59 humidity 50.0 10 > th dose dependent rect. 22 7
247 11.59 precipitation 0.1 270 < th dose dependent rect. 3 16
253 11.60 humidity 60.0 10 > th dose independent rect. 5 6
254 11.60 humidity 50.0 270 > th dose independent rect. 8 18
255 11.60 humidity 50.0 270 > th dose independent rect. 7 20
257 11.60 humidity 50.0 270 > th dose dependent rect. 4 2
271 11.61 atmosphere 1015.0 270 < th dose independent rect. 19 8
272 11.61 humidity 70.0 10 > th dose independent rect. 19 10
274 11.61 precipitation 0.1 30 < th dose independent rect. 5 17
281 11.61 humidity 50.0 270 > th dose dependent rect. 19 8
286 11.61 precipitation 0.1 30 < th dose dependent rect. 5 17
287 11.61 radiation 1.0 10 < th dose dependent rect. 22 19
289 11.62 temperature 15.0 270 > th dose independent rect. 13 9
299 11.62 humidity 50.0 270 > th dose dependent rect. 2 7
318 11.63 atmosphere 1000.0 10 > th dose independent rect. 23 6
322 11.63 humidity 90.0 270 < th dose independent rect. 7 8
325 11.63 wind 9.0 270 < th dose independent rect. 22 15
338 11.64 atmosphere 1000.0 90 > th dose independent rect. 23 5
353 11.64 radiation 40.0 30 < th dose dependent rect. 5 4
357 11.64 wind 9.0 10 < th dose dependent rect. 22 7
371 11.65 wind 1.0 270 > th dose independent rect. 8 18
383 11.65 humidity 60.0 30 > th dose dependent rect. 19 10
395 11.66 precipitation 0.1 270 < th dose independent rect. 13 9
402 11.66 temperature 30.0 10 < th dose dependent rect. 5 5
408 11.66 precipitation 0.1 270 < th dose dependent rect. 13 9
414 11.67 precipitation 0.1 10 < th dose independent rect. 5 4
432 11.67 wind 9.0 10 < th dose independent rect. 22 7
435 11.67 temperature 10.0 10 > th dose independent rect. 22 7
436 11.67 temperature 30.0 10 < th dose independent rect. 22 7
438 11.67 humidity 50.0 10 > th dose independent rect. 22 7
444 11.67 radiation 1.0 10 < th dose independent rect. 22 7
455 11.67 temperature 10.0 10 > th dose independent rect. 5 17
458 11.67 atmosphere 1015.0 10 < th dose independent rect. 5 17
466 11.67 precipitation 0.1 10 < th dose dependent rect. 5 4
474 11.67 radiation 10.0 10 < th dose dependent rect. 22 7
480 11.68 atmosphere 1000.0 270 > th dose independent rect. 23 2
481 11.68 wind 7.0 10 < th dose independent rect. 5 4
483 11.68 temperature 10.0 10 > th dose independent rect. 5 4
486 11.68 temperature 30.0 10 < th dose independent rect. 5 4
487 11.68 humidity 50.0 10 > th dose independent rect. 5 4
489 11.68 atmosphere 995.0 10 > th dose independent rect. 5 4
490 11.68 atmosphere 1015.0 10 < th dose independent rect. 5 4
493 11.68 temperature 10.0 10 > th dose independent rect. 5 6
498 11.68 atmosphere 995.0 10 > th dose independent rect. 5 6
500 11.68 atmosphere 1015.0 10 < th dose independent rect. 5 6
501 11.68 precipitation 0.1 10 < th dose independent rect. 5 6
506 11.68 wind 7.0 270 < th dose independent rect. 19 8
509 11.68 atmosphere 1000.0 10 > th dose independent rect. 5 15
512 11.68 temperature 10.0 10 > th dose independent rect. 11 18
513 11.68 radiation 40.0 10 < th dose independent rect. 5 18
515 11.68 temperature 10.0 10 > th dose independent rect. 9 20
517 11.68 precipitation 0.1 270 < th dose independent rect. 1 22
521 11.68 wind 9.0 10 < th dose dependent rect. 5 4
530 11.68 precipitation 0.1 10 < th dose dependent rect. 5 6
540 11.68 precipitation 0.1 270 < th dose dependent rect. 1 22
572 11.69 radiation 1.0 270 < th dose dependent rect. 11 16
596 11.70 humidity 50.0 270 > th dose independent rect. 22 15
697 11.72 radiation 1.0 270 > th dose independent rect. 7 8
699 11.72 radiation 1.0 270 < th dose independent rect. 12 15
776 11.73 temperature 10.0 270 > th dose independent rect. 19 8
777 11.73 temperature 30.0 270 < th dose independent rect. 19 8
778 11.73 humidity 50.0 270 > th dose independent rect. 19 8
780 11.73 atmosphere 995.0 270 > th dose independent rect. 19 8
781 11.73 radiation 1.0 270 < th dose independent rect. 19 8
789 11.73 temperature 10.0 270 > th dose independent rect. 22 15
790 11.73 atmosphere 995.0 270 > th dose independent rect. 22 15
791 11.73 temperature 10.0 270 > th dose independent rect. 3 16
792 11.73 atmosphere 1015.0 270 < th dose independent rect. 3 16
803 11.73 precipitation 0.1 270 < th dose independent rect. 8 18
805 11.73 precipitation 0.1 270 < th dose independent rect. 7 20
824 11.73 radiation 1.0 270 < th dose dependent rect. 19 8
835 11.73 precipitation 0.1 270 < th dose dependent rect. 8 18
836 11.73 precipitation 0.1 270 < th dose dependent rect. 7 20
837 11.74 atmosphere 1015.0 270 < th dose independent rect. 23 2
869 11.74 temperature 20.0 90 > th dose independent rect. 9 19
905 11.75 precipitation 0.1 270 < th dose independent rect. 22 15
918 11.75 precipitation 0.1 270 < th dose dependent rect. 22 15
931 11.76 precipitation 0.1 30 < th dose independent rect. 22 7
952 11.76 precipitation 0.1 30 < th dose dependent rect. 22 7
956 11.76 atmosphere 995.0 90 > th dose dependent rect. 4 15
993 11.77 atmosphere 1015.0 10 < th dose independent rect. 20 9
996 11.77 radiation 1.0 270 < th dose independent rect. 17 10