BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0667000 Os07g0667000|AK060587
(406 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0667000 Similar to Tubby-like protein 3 749 0.0
Os03g0351400 Similar to Tubby-like protein 3 496 e-140
Os05g0437900 Tubby family protein 418 e-117
Os12g0163400 Tubby family protein 404 e-113
Os08g0103300 Similar to Tubby-like protein 3 397 e-110
Os04g0687900 Similar to T24D18.17 protein (Tubby-like prote... 393 e-109
Os01g0866800 Similar to F24P17.15 protein (Tubby-like prote... 382 e-106
Os05g0514300 Similar to Tubby-like protein 3 355 3e-98
Os05g0560400 Tubby family protein 330 8e-91
Os01g0759100 Tubby family protein 320 9e-88
Os11g0163600 Tubby family protein 306 2e-83
Os02g0705300 Tubby family protein 238 7e-63
Os02g0179400 75 6e-14
>Os07g0667000 Similar to Tubby-like protein 3
Length = 406
Score = 749 bits (1935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 363/406 (89%), Positives = 363/406 (89%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVMRESCWTQLPP 60
MSFRSVIQEVKGEIGAIS LVMRESCWTQLPP
Sbjct: 1 MSFRSVIQEVKGEIGAISRRGFRSRPGRVRRVAAAAEEPPDESSAAALVMRESCWTQLPP 60
Query: 61 XXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPG 120
GWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPG
Sbjct: 61 ELLREVLARVEESEGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPG 120
Query: 121 PRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDIS 180
PRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDIS
Sbjct: 121 PRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDIS 180
Query: 181 KRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSH 240
KRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSH
Sbjct: 181 KRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYPVSH 240
Query: 241 ISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKSVR 300
ISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKSVR
Sbjct: 241 ISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKSVR 300
Query: 301 ANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESNPTN 360
ANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESNPTN
Sbjct: 301 ANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESNPTN 360
Query: 361 QEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
QEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE
Sbjct: 361 QEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
>Os03g0351400 Similar to Tubby-like protein 3
Length = 296
Score = 496 bits (1277), Expect = e-140, Method: Compositional matrix adjust.
Identities = 228/289 (78%), Positives = 259/289 (89%)
Query: 118 QPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMN 177
QPGPRD +KCFI RNRTTQTYYLYIGLT+AL DDGKFLLAARKCR+ TCT+YLISLDM+
Sbjct: 8 QPGPRDGTLKCFIRRNRTTQTYYLYIGLTEALADDGKFLLAARKCRKPTCTDYLISLDMS 67
Query: 178 DISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAGNYP 237
D+SK +++Y+GKLRSNFLGTKFT+YDAHPPY G V+SK +SARV+G N +SPR+PAGNYP
Sbjct: 68 DMSKGSNTYIGKLRSNFLGTKFTVYDAHPPYDGAVVSKSRSARVVGLNQVSPRVPAGNYP 127
Query: 238 VSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSK 297
VSHISYELNVLG+RGPRRM+C MDSIP SA+++GG APTQTEFPLS +SF SI FF+SK
Sbjct: 128 VSHISYELNVLGARGPRRMNCIMDSIPTSAVQEGGKAPTQTEFPLSGLDSFPSISFFRSK 187
Query: 298 SVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVASDESN 357
S R +++T+ L TQ KLVLKNKSPRWHE LQCWCLNF GRVTVASVKNFQLVASDE+
Sbjct: 188 SARIDSATSQLSTQKEEKLVLKNKSPRWHEQLQCWCLNFRGRVTVASVKNFQLVASDENG 247
Query: 358 PTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
PTNQE D VILQFGK+GKD+FTMDYRYPISAFQ+FAICLSSFDTKIACE
Sbjct: 248 PTNQEQDKVILQFGKIGKDLFTMDYRYPISAFQSFAICLSSFDTKIACE 296
>Os05g0437900 Tubby family protein
Length = 445
Score = 418 bits (1075), Expect = e-117, Method: Compositional matrix adjust.
Identities = 215/445 (48%), Positives = 280/445 (62%), Gaps = 39/445 (8%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXLVMRESCWT 56
MSFRS++++V+ G++S L+++ES W
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVTLAGLSGLTGHHRGKSQSTVHELCDADLIIQESRWA 60
Query: 57 QLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISL 116
LPP WP R+DVV+CA VC++WR + +EIV +PE G LTFP+SL
Sbjct: 61 SLPPELLRDVIRRLEASESTWPSRKDVVSCAAVCKAWREMCKEIVLSPEFCGKLTFPLSL 120
Query: 117 KQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLD 175
KQPGPRD ++CFI R+++ TY+LY+ L+ A L D GKFLL+A++ R+TTCTEY+IS+D
Sbjct: 121 KQPGPRDGMIQCFIKRDKSKSTYHLYLCLSTAVLADSGKFLLSAKRHRKTTCTEYVISMD 180
Query: 176 MNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISK-GQSARVIGSNHLSPRIPAG 234
++IS+ + +Y+GKLRSNFLGTKF IYD P Y G VI G+S+R S +SP++P+G
Sbjct: 181 ADNISRSSSTYIGKLRSNFLGTKFIIYDTQPSYNGAVIPPVGRSSRRFNSKKVSPKMPSG 240
Query: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE--FPLSYHESFTSIP 292
+Y ++ ++YELNVLG+RGPRRMHC M SIP S++E GG P Q E P ++ ESF S
Sbjct: 241 SYNIAQVTYELNVLGTRGPRRMHCVMHSIPASSVEPGGIVPGQPEQIVPRAFEESFRSTT 300
Query: 293 FFKSKSVRANN--------------STASLLTQNGSK--------LVLKNKSPRWHEHLQ 330
F S+ + S + T NG + LVL+NK+PRWHE LQ
Sbjct: 301 SFSKSSIMDRSMDFSSSRDFSSARFSDIAGGTINGDEEGQNKERPLVLRNKAPRWHEQLQ 360
Query: 331 CWCLNFHGRVTVASVKNFQLV---------ASDESNPTNQEHDDVILQFGKVGKDMFTMD 381
CWCLNF GRVT+ASVKNFQL+ A S P E D +ILQFGKV KDMFTMD
Sbjct: 361 CWCLNFRGRVTIASVKNFQLIAAPAQPPAGAPTPSQPAPPEQDKIILQFGKVAKDMFTMD 420
Query: 382 YRYPISAFQAFAICLSSFDTKIACE 406
YRYP+SAFQAFAICLSSFDTK+ACE
Sbjct: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
>Os12g0163400 Tubby family protein
Length = 445
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 214/445 (48%), Positives = 279/445 (62%), Gaps = 39/445 (8%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL----VMRESCWT 56
MSFRS++++V+ G++S V++ SCW
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRGFEVRLVGHRRGRSHSAVHELRDGHAAAAAADVVQSSCWA 60
Query: 57 QLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISL 116
LPP WP R++VVACA VCR+WR + REIV+ PE G +TFP+SL
Sbjct: 61 NLPPELLRDVIERLEASEAAWPSRKNVVACAAVCRTWRDMCREIVKNPEFCGKITFPVSL 120
Query: 117 KQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLD 175
KQPGPR+ ++CFI R+++TQTY LY+ L+ A L + GKFLL+A++ R TCTEY I +
Sbjct: 121 KQPGPRNGAIQCFIKRDKSTQTYNLYLCLSSAVLVESGKFLLSAKRYSRATCTEYTIFMS 180
Query: 176 MNDISKRTDSYVGKLRSNFLGTKFTIYDAHPP-YAGDVISKGQSARVIGSNHLSPRIPAG 234
++ S+ ++ Y+GKLRSN LGTKF IYD PP +V G+++R S +SP+ P+
Sbjct: 181 ADNTSRSSNMYIGKLRSNLLGTKFVIYDTQPPCNTANVSQSGKTSRRFYSRKVSPKNPSS 240
Query: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPL--SYHESFTSIP 292
Y ++ +SYELNVLG+RGPRRM+C M SIP S++E GGT P Q + L S ESF SI
Sbjct: 241 TYSIAQVSYELNVLGTRGPRRMNCVMHSIPASSLEAGGTVPCQPDSVLARSLDESFGSIS 300
Query: 293 FFKS----KSVRANNSTASLLTQNG-------------SK---LVLKNKSPRWHEHLQCW 332
F KS +S+R ++S S ++ G SK L+L+NK+PRWHE LQCW
Sbjct: 301 FSKSSIMDRSIRFSSSRYSDISVGGPMVGGQALGDSDESKERPLILRNKAPRWHEQLQCW 360
Query: 333 CLNFHGRVTVASVKNFQLVASDE-----------SNPTNQEHDDVILQFGKVGKDMFTMD 381
CLNF GRVTVASVKNFQLVA+ + + P +HD VILQFGKV KDMFTMD
Sbjct: 361 CLNFKGRVTVASVKNFQLVAATQPAAGAPTPSQPAPPPPPDHDKVILQFGKVAKDMFTMD 420
Query: 382 YRYPISAFQAFAICLSSFDTKIACE 406
YRYP+SAFQAFAICLSSFDTK+ACE
Sbjct: 421 YRYPLSAFQAFAICLSSFDTKLACE 445
>Os08g0103300 Similar to Tubby-like protein 3
Length = 451
Score = 397 bits (1019), Expect = e-110, Method: Compositional matrix adjust.
Identities = 215/451 (47%), Positives = 284/451 (62%), Gaps = 45/451 (9%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXX----XXXXXXXXXXXXXXXXXXXXLVMRESCWT 56
MSFRS++++V+ G++S +V+ +S W
Sbjct: 1 MSFRSIVRDVRDSFGSLSRRSFEVRISGLPGLSGHHRGKSLGSLSELRDRPVVVDQSRWV 60
Query: 57 QLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISL 116
LPP WP R+DVVACA VCR+WR I ++IV++PE G LTFP+SL
Sbjct: 61 GLPPELLRDVMKRLEEGESNWPSRKDVVACAAVCRTWREICKDIVQSPEICGKLTFPVSL 120
Query: 117 KQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLD 175
KQPGPRD ++CFI R+++ TYYLY+ L+ A L+++GKFLLAA++ RR T TEY+IS+D
Sbjct: 121 KQPGPRDGLIQCFIKRDKSKLTYYLYLCLSPAVLSENGKFLLAAKRNRRATSTEYIISVD 180
Query: 176 MNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPY-AGDVISKGQSARVIGSNHLSPRIPAG 234
+IS+ ++ YVGK+RSNFLGTKF +YD PPY AG ++S +R I S +SP++P G
Sbjct: 181 SKNISRSSNGYVGKMRSNFLGTKFVVYDTQPPYNAGSLMSCQHGSRRISSRRVSPKLPTG 240
Query: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE--FPLSYHESF---- 288
+YP++H+ YELNVLG+RGPRRM C M SIP SA++ G P Q E P + ESF
Sbjct: 241 SYPIAHVKYELNVLGTRGPRRMQCTMHSIPASAVDPEGVVPGQPEQLLPGPFEESFRSTN 300
Query: 289 TSIPF-FKSKSVRANNSTASLLTQNGSK-------------LVLKNKSPRWHEHLQCWCL 334
TS F F +S+ ++S S ++ + ++ LVL+NK PRWHE LQCWCL
Sbjct: 301 TSSRFSFMDRSLDFSSSRFSEISGSANQQGEDDIPEAKERPLVLRNKVPRWHEQLQCWCL 360
Query: 335 NFHGRVTVASVKNFQLVAS-------------------DESNPTNQEHDDVILQFGKVGK 375
NF GRVTVASVKNFQL+A+ S+ + +H VILQFGKVGK
Sbjct: 361 NFRGRVTVASVKNFQLIAAASSESSQLEQQQQQQQQNHASSSSSASDHGKVILQFGKVGK 420
Query: 376 DMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
DMFTMDYRYP+SAFQAFAICL+SFDTK+ACE
Sbjct: 421 DMFTMDYRYPLSAFQAFAICLTSFDTKLACE 451
>Os04g0687900 Similar to T24D18.17 protein (Tubby-like protein TULP8)
Length = 462
Score = 393 bits (1010), Expect = e-109, Method: Compositional matrix adjust.
Identities = 211/463 (45%), Positives = 276/463 (59%), Gaps = 58/463 (12%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LVMRESCWTQLP 59
MSFRS++++ + G +S +V ++S W LP
Sbjct: 1 MSFRSIVRDFRDSFGTLSKRSFEVKISGFSGRHRGKSIGPSSELDDTPVVAQQSKWAGLP 60
Query: 60 PXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQP 119
P WP R+DVVACA VC +WR + ++IVR PE G LTFP+SLKQP
Sbjct: 61 PELLRDVMKRLEEDDSNWPSRKDVVACASVCTTWRDMCKDIVRNPEFCGKLTFPVSLKQP 120
Query: 120 GPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDD-GKFLLAARKCRRTTCTEYLISLDMND 178
GPRD ++CFI R+++ TY+LY+ L+ A+ D+ GKFLL+A++ RRTT T+Y+IS+D +
Sbjct: 121 GPRDGVIQCFIKRDKSKLTYHLYLCLSSAVLDETGKFLLSAKRSRRTTHTDYIISMDSKN 180
Query: 179 ISKRTDSYVGKLRSNFLGTKFTIYDAHPPY-AGDVISKGQSARVIGSNHLSPRIPAGNYP 237
IS+ + Y+GKLRSNFLGTKF IYD PPY A + S+ +++R S +SP++P G YP
Sbjct: 181 ISRSSSGYIGKLRSNFLGTKFIIYDTQPPYNARTLCSQERTSRRFSSRKVSPKVPTGCYP 240
Query: 238 VSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE--FPLSYHESFTSIPFFK 295
+ ++YELNVLG+RGPRRM CAM SIP SA+E GG P Q + P + ESF S+
Sbjct: 241 IVQVNYELNVLGTRGPRRMQCAMHSIPASAVEPGGIVPGQPKELLPRLFEESFRSMATSF 300
Query: 296 SKSVRANNST---ASLLTQNGS-------------------KLVLKNKSPRWHEHLQCWC 333
SK ++ST +S ++ G LVL+NK+PRWHE LQCWC
Sbjct: 301 SKYSITDHSTDFSSSRFSEFGGGALQGQEQEQDGDDVNKERPLVLRNKAPRWHEQLQCWC 360
Query: 334 LNFHGRVTVASVKNFQLVASDESNPTN------------------------------QEH 363
LNF GRVTVASVKNFQL+A+ P++ H
Sbjct: 361 LNFRGRVTVASVKNFQLIAA-APQPSSGAASEPSQAGQAAQQQTQPSQPSSSSSSSSSNH 419
Query: 364 DDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
D VILQFGKV KDMFTMDYRYP+SAFQAFAICL+SFDTK+ACE
Sbjct: 420 DTVILQFGKVAKDMFTMDYRYPLSAFQAFAICLTSFDTKLACE 462
>Os01g0866800 Similar to F24P17.15 protein (Tubby-like protein TULP9)
Length = 448
Score = 382 bits (982), Expect = e-106, Method: Compositional matrix adjust.
Identities = 206/448 (45%), Positives = 272/448 (60%), Gaps = 42/448 (9%)
Query: 1 MSFRSVIQEVKGEIGAISXXXXXXXXXX----XXXXXXXXXXXXXXXXXXXLVMRESCWT 56
MSFRS++++V+ G++S ++ ES W
Sbjct: 1 MSFRSIVRDVRDGFGSLSRRSFEVTLASLYGLTGHHKGKTQSSLDELDDSPAIIPESRWA 60
Query: 57 QLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISL 116
LPP WP RR+VV A VCR+WR + +E V +PE G LTFP+S+
Sbjct: 61 SLPPELLREVIRRLEADESTWPSRRNVVCFAAVCRTWREMCKETVLSPEFCGKLTFPVSI 120
Query: 117 KQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALT-DDGKFLLAARKCRRTTCTEYLISLD 175
KQPGPRD ++C+I RNR+ TY+LY+ L++ +T + GKF+LAA++ R+TTCTEY IS+
Sbjct: 121 KQPGPRDGMIQCYIKRNRSKSTYHLYLCLSNVVTAEGGKFVLAAKRHRKTTCTEYTISMV 180
Query: 176 MNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISK-GQSARVIGSNHLSPRIPAG 234
+IS+ + + +GKLRSNFLGTKF IYD PPY G V+ G++++ S +SP++P+
Sbjct: 181 SGNISRSSRTNIGKLRSNFLGTKFIIYDTQPPYNGAVVPHVGRTSKRFNSTKVSPKVPSV 240
Query: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTE--FPLSYHESFTSIP 292
Y ++ +SYELNVLG+RGPRRM C M SIP S++E GG P Q E P + +SF S
Sbjct: 241 TYNIAQVSYELNVLGTRGPRRMRCMMHSIPASSVEPGGIVPGQPEQIVPRALEDSFRSTT 300
Query: 293 FFK---------SKSV----------RANNSTASLL--TQNGS----KLVLKNKSPRWHE 327
F SKS+ R ++ + S++ NG LVL+NK PRWHE
Sbjct: 301 SFSQSFRSTTSFSKSIMDPSMDFSSARFSDISGSIMGGDDNGEIKERPLVLRNKPPRWHE 360
Query: 328 HLQCWCLNFHGRVTVASVKNFQLV---------ASDESNPTNQEHDDVILQFGKVGKDMF 378
LQCWCLNF GRVT+ASVKNFQLV A S P + + VILQFGKV +DMF
Sbjct: 361 QLQCWCLNFRGRVTIASVKNFQLVAAPSPPPAGAPTPSQPGPADPEKVILQFGKVARDMF 420
Query: 379 TMDYRYPISAFQAFAICLSSFDTKIACE 406
TMDYRYP+SAFQAFAICLSSFDTK+ACE
Sbjct: 421 TMDYRYPLSAFQAFAICLSSFDTKLACE 448
>Os05g0514300 Similar to Tubby-like protein 3
Length = 372
Score = 355 bits (912), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 187/354 (52%), Positives = 221/354 (62%), Gaps = 35/354 (9%)
Query: 55 WTQLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPI 114
W++L P WP RRDVVACA VCR WR +VR P G +TFP
Sbjct: 52 WSRLLPELLTEIMRRVDAGAERWPPRRDVVACACVCRRWRDAAVSVVRPPLECGRITFPS 111
Query: 115 SLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISL 174
SLKQPGPRDAPM CFI RN+ T+YLY+ LT ALTD GKFLLAAR+ R TEY+IS
Sbjct: 112 SLKQPGPRDAPMHCFIRRNKKNSTFYLYLSLTQALTDKGKFLLAARRFRNGAHTEYIISY 171
Query: 175 DMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPAG 234
D +D+ ++SYVGKLRS+FLGTKF IYD+ PPY G S+ QS+R S ++P + G
Sbjct: 172 DCDDLFPGSNSYVGKLRSDFLGTKFIIYDSQPPYDGAKPSRSQSSRRFASKQINPNVSGG 231
Query: 235 NYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFF 294
NY V +SY+ N L SRGPRRM C + PV +S S P
Sbjct: 232 NYEVGQVSYKFNFLKSRGPRRMQCNIQ-CPVG-------------------QSTASDPLK 271
Query: 295 KSKSVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVA-S 353
K L S L L+NK+PRWHEHLQCWCLNFHGRVTVASVKNFQLVA +
Sbjct: 272 K-------------LISTSSPLALRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAPA 318
Query: 354 DESNPTN-QEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIACE 406
S+P + + VILQFGK+ D FTMDYR P+SAFQAFAICL+SF TK+ACE
Sbjct: 319 GTSDPWGIADEETVILQFGKIEDDAFTMDYRQPLSAFQAFAICLTSFGTKLACE 372
>Os05g0560400 Tubby family protein
Length = 349
Score = 330 bits (847), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 172/333 (51%), Positives = 221/333 (66%), Gaps = 40/333 (12%)
Query: 77 WPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPISLKQPGPRDAPMKCFIVRNRTT 136
WP R+D+V+CA VCR WR +VR SG +TFP SLKQPGP+D P++CF+ RN+
Sbjct: 47 WPARKDLVSCACVCRRWREAAAAVVRPLPESGRITFPSSLKQPGPKDFPIQCFVKRNKKK 106
Query: 137 QTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTDSYVGKLRSNFLG 196
+YLY+GL + D GKFL+AAR+ RR TEY+ISLD +D+S+ +++YVGKLRS+F G
Sbjct: 107 SMFYLYLGLLNGTMDKGKFLMAARRFRRGPHTEYVISLDADDLSQGSNAYVGKLRSDFWG 166
Query: 197 TKFTIYDAHPPYAGDVISKGQSARVIGSNH------LSPRIPAGNYPVSHISYELNVLGS 250
T F IYD PPY S +S++ GS H + P+I AGN+ V ISY+ N+L S
Sbjct: 167 TNFKIYDNQPPYDDAKTSSTRSSQRFGSTHRFGSRRICPQISAGNFNVGQISYKYNLLKS 226
Query: 251 RGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPFFKSKSVRANNSTASLLT 310
RGPRRM C M+ P+ E ++ S K+KS+R +T
Sbjct: 227 RGPRRMFCTME------------CPSTQE---TWENS------LKTKSLRCTGTT----- 260
Query: 311 QNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLVAS-DESNPTN-QEHDDVIL 368
VL+NK+PRWHEHLQCWCLNFHGRVTVASVKNFQLVA+ D S+P + + + VIL
Sbjct: 261 ------VLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVATADPSHPDSVGDEETVIL 314
Query: 369 QFGKVGKDMFTMDYRYPISAFQAFAICLSSFDT 401
QFGKV ++FTMDYR P+SAFQAFAICLSSF+T
Sbjct: 315 QFGKVDSNIFTMDYRQPLSAFQAFAICLSSFET 347
>Os01g0759100 Tubby family protein
Length = 368
Score = 320 bits (821), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 209/353 (59%), Gaps = 32/353 (9%)
Query: 52 ESCWTQLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLT 111
E W+ L P WP RRDVVACA VCR WR + +V+ P SG +T
Sbjct: 48 EERWSALVPDLLADILRCVEAGSERWPPRRDVVACASVCRRWRDVAVAVVQPPLESGKIT 107
Query: 112 FPISLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDALTDDGKFLLAARKCRRTTCTEYL 171
FP SLKQPGPRDAPM+CFI RN+ T++LY+GLT LTDD KFLLAAR+CRR EY
Sbjct: 108 FPSSLKQPGPRDAPMQCFIKRNKKNSTFFLYLGLTQELTDDEKFLLAARRCRRGLHKEYA 167
Query: 172 ISLDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRI 231
I+++ + + + S VG L+SNF GTKFTI D PPY G +S R G+ H P +
Sbjct: 168 ITINSDGLFHGSQSCVGNLKSNFTGTKFTIRDWQPPYEGAKAFSSRSGRWFGNKHRCPLV 227
Query: 232 PAGNYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSI 291
G+ V +SY+ ++L RGPRRM C++ + +G Q LS SI
Sbjct: 228 STGDVEVGEVSYKYSLLRPRGPRRMSCSVQ----CPVLKGTAVDPQDGKRLS-----NSI 278
Query: 292 PFFKSKSVRANNSTASLLTQNGSKLVLKNKSPRWHEHLQCWCLNFHGRVTVASVKNFQLV 351
P S LVL +K P WHEHLQCWCLNFHGRV VASVKNFQL+
Sbjct: 279 P---------------------SSLVLNSKVPSWHEHLQCWCLNFHGRVMVASVKNFQLI 317
Query: 352 ASDESNPTNQEHDDVILQFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIA 404
A E P V+LQFGK+ D+FTMDYR P+SAFQAFAICLS+F TK+A
Sbjct: 318 APVE--PGEPSDKTVVLQFGKIDDDVFTMDYRQPLSAFQAFAICLSNFGTKLA 368
>Os11g0163600 Tubby family protein
Length = 317
Score = 306 bits (783), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 163/318 (51%), Positives = 213/318 (66%), Gaps = 38/318 (11%)
Query: 126 MKCFIVRNRTTQTYYLYIGLTDA-LTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTD 184
M+CFI R+++TQTYYLY+ L A L D+GKFLL+A++ TCTEY+IS++ N++S+ T+
Sbjct: 1 MQCFIRRDKSTQTYYLYLSLGSAVLVDNGKFLLSAKRNWHATCTEYVISMNANNLSRSTN 60
Query: 185 SYVGKLRSNFLGTKFTIYDAHPPYAGDVISK-GQSARVIGSNHLSPRIPAGNYPVSHISY 243
+ +GKLRSNFLGTKF IYD H PY S+ G+++R SN + + P Y +++ISY
Sbjct: 61 TNIGKLRSNFLGTKFVIYDTHTPYNATSDSQSGKTSRRF-SNKGTAKHPCSTYSIANISY 119
Query: 244 ELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSY---HESFTSIPFFKSKSVR 300
ELNV G+RGPRRM C M SIP S++E GGT P+Q + L++ SF S+ F KS +
Sbjct: 120 ELNVFGTRGPRRMCCLMHSIPASSLEAGGTVPSQPDSILAHSLNESSFRSVSFSKSSVMD 179
Query: 301 ANNSTAS-----------------LLTQN----GSKLVLKNKSPRWHEHLQCWCLNFHGR 339
+ +S +L+ + + L+L+NK+PRWHE LQCWCLNF GR
Sbjct: 180 HSMHFSSAQFSDISIGDGPRIGGRVLSDDEECKETPLILQNKAPRWHEQLQCWCLNFRGR 239
Query: 340 VTVASVKNFQLVASDE-----------SNPTNQEHDDVILQFGKVGKDMFTMDYRYPISA 388
VTVASVKNFQL+A+ + P EHD VILQFGKV KDMFTMDY YP+SA
Sbjct: 240 VTVASVKNFQLIAATQPAAGAPTPSQPVPPPPPEHDKVILQFGKVAKDMFTMDYHYPLSA 299
Query: 389 FQAFAICLSSFDTKIACE 406
FQAFAI LSSFDTK+ACE
Sbjct: 300 FQAFAISLSSFDTKLACE 317
>Os02g0705300 Tubby family protein
Length = 326
Score = 238 bits (606), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 120/244 (49%), Positives = 155/244 (63%), Gaps = 2/244 (0%)
Query: 55 WTQLPPXXXXXXXXXXXXXXGWWPRRRDVVACAGVCRSWRGIVREIVRTPEASGNLTFPI 114
W LPP WP RR VVACA VCRSWR + +E+V+T E G +TFPI
Sbjct: 68 WANLPPELLLDVIQRVEASEATWPARRQVVACAAVCRSWREVTKEVVKTLEECGRITFPI 127
Query: 115 SLKQPGPRDAPMKCFIVRNRTTQTYYLYIGLTDAL-TDDGKFLLAARKCRRTTCTEYLIS 173
SLKQPGPR+ P++CF+ R+R T TY LY+GL+ +L ++ K LLAARK RR T T ++IS
Sbjct: 128 SLKQPGPREHPVQCFVRRDRATSTYLLYLGLSPSLHGENDKLLLAARKIRRATRTSFVIS 187
Query: 174 LDMNDISKRTDSYVGKLRSNFLGTKFTIYDAHPPYAGDVISKGQSARVIGSNHLSPRIPA 233
L ND S + +YVGKL+ NFLGTKFTI+D+ PP V+ + ++ +SPR+P
Sbjct: 188 LVSNDFSLSSSTYVGKLKPNFLGTKFTIFDSQPPCDAVVLPNNRPSKR-HFKQVSPRLPL 246
Query: 234 GNYPVSHISYELNVLGSRGPRRMHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPF 293
GNY V+ +SYEL VL +RGPRRM C M SIP I++GG APT T S E ++
Sbjct: 247 GNYNVATVSYELTVLRNRGPRRMQCTMHSIPALCIQEGGKAPTPTGIIHSLDEQVPALST 306
Query: 294 FKSK 297
K K
Sbjct: 307 SKGK 310
>Os02g0179400
Length = 427
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 128/277 (46%), Gaps = 54/277 (19%)
Query: 139 YYLYIGLTDALTDDGKFLLAARKCRRTTCTEYLISLDMNDISKRTD-SYVGKLRSNFLGT 197
Y LY D + L AR RR +E++++ +++ I +D +++G L SN +G+
Sbjct: 193 YSLYTNEGQGRQD--RKLAVARHRRRRGRSEFVVAQNLDGIFCTSDKNFLGTLSSNLVGS 250
Query: 198 KFTIYDAHPPYAGDVIS--KGQSARVIGSNHLSPRIPAGNYPVSHISYELNVLGSRGPRR 255
++ I+ G+ + K QS R++G +P V+ ++ + + P+
Sbjct: 251 RYRIWGQ-----GNRVDEIKSQSKRLLGVVAFAP-------TVTTLTGSFRSMRAWIPKN 298
Query: 256 MHCAMDSIPVSAIEQGGTAPTQTEFPLSYHESFTSIPF-FKSKSVRANNSTASLLTQNGS 314
+ + + +EFP+ + + +P ++ K ++A+
Sbjct: 299 QSIHL---------KNSNSAQASEFPVVEIQHISGLPKDWQEKKIKADQ----------- 338
Query: 315 KLVLKNKSPRWHEHLQCWCLNFHGRV------TVASVKNFQLVASDESNPTNQEHDDVIL 368
L ++SP ++ + + L+F R SVKNFQ+ ++ T IL
Sbjct: 339 ---LCSRSPFYNNMTKRYELDFRERAGRMGYKVQPSVKNFQMTLEEKGRQT-------IL 388
Query: 369 QFGKVGKDMFTMDYRYPISAFQAFAICLSSFDTKIAC 405
Q G++GK + MD+RYP++ +QA ICL+S D+K+ C
Sbjct: 389 QLGRIGKSKYIMDFRYPLTGYQALCICLASIDSKLCC 425
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.419
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,624,312
Number of extensions: 510231
Number of successful extensions: 1151
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1120
Number of HSP's successfully gapped: 16
Length of query: 406
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 303
Effective length of database: 11,657,759
Effective search space: 3532300977
Effective search space used: 3532300977
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)