Os07g0667000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Tubby-like protein 3.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0667000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Tubby-like protein 3.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 46.14 | 0.319 | 11.5 | -0.133 | 1.69 | 0.529 | 0.00697 | -0.966 | -0.188 | 7.29 | 25.01 | 4494 | -- | -- |
| 46.44 | 0.317 | 11.5 | 0.0988 | 1.69 | 0.44 | 0.0101 | -- | -0.142 | 7.28 | 24.65 | 4496 | -- | -- |
| 46.14 | 0.316 | 11.5 | -0.129 | 1.69 | 0.53 | -- | -0.983 | -0.182 | 7.28 | 25.3 | 4497 | -- | -- |
| 46.44 | 0.317 | 11.5 | 0.0928 | 1.68 | 0.437 | -- | -- | -0.145 | 7.29 | 24.54 | 4491 | -- | -- |
| 192.94 | 0.647 | 11.6 | -0.239 | -- | 0.66 | -- | -2.11 | -0.0401 | -- | 29.49 | 5729 | -- | -- |
| 52.19 | 0.339 | 11.5 | 0.25 | 1.68 | -- | -0.0144 | -- | -0.115 | 7.25 | -- | -- | -- | -- |
| 52.19 | 0.338 | 11.5 | 0.25 | 1.68 | -- | -- | -- | -0.115 | 7.25 | -- | -- | -- | -- |
| 194.98 | 0.65 | 11.5 | 0.142 | -- | 0.466 | -- | -- | -0.0987 | -- | 25.39 | 5722 | -- | -- |
| 46.67 | 0.318 | 11.5 | -- | 1.69 | 0.463 | -- | -- | -0.148 | 7.29 | 24.58 | 4495 | -- | -- |
| 202.09 | 0.664 | 11.5 | 0.28 | -- | -- | -- | -- | -0.0866 | -- | -- | -- | -- | -- |
| 53.84 | 0.343 | 11.5 | -- | 1.68 | -- | -- | -- | -0.143 | 7.24 | -- | -- | -- | -- |
| 194.84 | 0.65 | 11.5 | -- | -- | 0.437 | -- | -- | -0.117 | -- | 26.6 | 5710 | -- | -- |
| 204.15 | 0.667 | 11.5 | -- | -- | -- | -- | -- | -0.118 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 42.82 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 4 |
| 5 | 43.68 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 2 |
| 10 | 43.97 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 17 | 11 |
| 11 | 44.01 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 3 |
| 16 | 44.14 | temperature | 30.0 | 720 | < th | dose independent | rect. | 16 | 11 |
| 26 | 44.50 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 11 |
| 30 | 44.56 | radiation | 20.0 | 90 | < th | dose independent | rect. | 4 | 9 |
| 32 | 44.59 | radiation | 30.0 | 270 | < th | dose independent | sin | 9 | NA |
| 37 | 44.66 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 41 | 44.71 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 3 | 4 |
| 46 | 44.77 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 53 | 44.81 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 57 | 44.84 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 68 | 44.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 71 | 44.92 | radiation | 40.0 | 10 | < th | dose independent | rect. | 4 | 21 |
| 72 | 44.92 | radiation | 40.0 | 90 | < th | dose independent | rect. | 3 | 22 |
| 75 | 44.93 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 5 | 23 |
| 76 | 44.95 | radiation | 40.0 | 90 | < th | dose independent | rect. | 4 | 13 |
| 77 | 44.95 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 14 |
| 78 | 44.95 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 14 |
| 81 | 44.96 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 82 | 44.97 | temperature | 20.0 | 720 | < th | dose independent | rect. | 4 | 3 |
| 89 | 45.00 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 94 | 45.01 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 20 |
| 95 | 45.01 | radiation | 1.0 | 90 | < th | dose independent | rect. | 5 | 23 |
| 97 | 45.01 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 20 |
| 102 | 45.03 | radiation | 10.0 | 720 | < th | dose independent | rect. | 3 | 4 |
| 104 | 45.03 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 106 | 45.05 | temperature | 20.0 | 720 | < th | dose independent | rect. | 5 | 1 |
| 107 | 45.05 | atmosphere | 1005.0 | 720 | > th | dose independent | rect. | 16 | 3 |
| 119 | 45.08 | radiation | 10.0 | 720 | < th | dose independent | rect. | 20 | 11 |
| 120 | 45.08 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 5 | 23 |
| 123 | 45.09 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 15 | 4 |
| 133 | 45.13 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 12 | 10 |
| 134 | 45.13 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 12 | 10 |
| 136 | 45.14 | radiation | 30.0 | 270 | < th | dose independent | rect. | 2 | 12 |
| 145 | 45.16 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 19 | 5 |
| 156 | 45.19 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 9 |
| 166 | 45.25 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 4 |
| 177 | 45.29 | temperature | 25.0 | 270 | < th | dose independent | rect. | 8 | 6 |
| 194 | 45.34 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 9 | 19 |
| 200 | 45.36 | humidity | 70.0 | 720 | > th | dose independent | rect. | 17 | 2 |
| 203 | 45.36 | radiation | 10.0 | 720 | < th | dose independent | rect. | 19 | 13 |
| 213 | 45.39 | radiation | 40.0 | 270 | < th | dose dependent | sin | 7 | NA |
| 214 | 45.39 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 11 |
| 225 | 45.44 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 14 |
| 227 | 45.44 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 229 | 45.44 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 239 | 45.47 | radiation | 1.0 | 30 | > th | dose independent | rect. | 10 | 23 |
| 243 | 45.48 | temperature | 30.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 249 | 45.49 | radiation | 40.0 | 10 | < th | dose independent | sin | 7 | NA |
| 269 | 45.53 | radiation | 1.0 | 90 | < th | dose independent | rect. | 7 | 21 |
| 289 | 45.58 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 18 | 11 |
| 291 | 45.58 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 15 | 21 |
| 295 | 45.60 | radiation | 20.0 | 720 | < th | dose independent | rect. | 16 | 1 |
| 316 | 45.64 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 329 | 45.66 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 7 | 21 |
| 335 | 45.68 | temperature | 30.0 | 90 | < th | dose independent | rect. | 9 | 19 |
| 337 | 45.68 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 2 | 11 |
| 338 | 45.69 | temperature | 25.0 | 270 | < th | dose independent | rect. | 9 | 2 |
| 345 | 45.70 | wind | 7.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 348 | 45.70 | radiation | 1.0 | 90 | < th | dose independent | rect. | 12 | 16 |
| 362 | 45.71 | radiation | 30.0 | 720 | < th | dose dependent | rect. | 16 | 11 |
| 364 | 45.72 | humidity | 70.0 | 720 | > th | dose independent | rect. | 16 | 11 |
| 371 | 45.73 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 12 |
| 375 | 45.73 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 12 |
| 376 | 45.73 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 1 | 22 |
| 382 | 45.74 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 12 |
| 407 | 45.77 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
| 412 | 45.77 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 17 | 11 |
| 420 | 45.78 | radiation | 1.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 426 | 45.79 | radiation | 30.0 | 720 | < th | dose independent | rect. | 15 | 4 |
| 434 | 45.80 | radiation | 1.0 | 270 | > th | dose dependent | sin | 7 | NA |
| 436 | 45.80 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 12 | 16 |
| 438 | 45.81 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 452 | 45.81 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 22 |
| 455 | 45.82 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 21 |
| 459 | 45.82 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 21 |
| 461 | 45.83 | radiation | 30.0 | 90 | < th | dose independent | rect. | 4 | 5 |
| 467 | 45.83 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 17 | 11 |
| 485 | 45.85 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 15 | 4 |
| 510 | 45.88 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 10 |
| 516 | 45.89 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 20 |
| 531 | 45.91 | wind | 7.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 544 | 45.92 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 5 |
| 549 | 45.92 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 15 | 13 |
| 576 | 45.96 | humidity | 70.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 608 | 45.98 | radiation | 1.0 | 30 | < th | dose independent | sin | 12 | NA |
| 620 | 45.98 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 23 | 17 |
| 634 | 45.99 | wind | 7.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 646 | 46.00 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 4 | 3 |
| 687 | 46.01 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 8 | 10 |
| 711 | 46.02 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 3 | 19 |
| 746 | 46.02 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 3 | 19 |
| 754 | 46.03 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 4 | 5 |
| 766 | 46.04 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 13 |
| 786 | 46.04 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 13 |
| 793 | 46.05 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 16 | NA |
| 820 | 46.06 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 12 | 14 |
| 826 | 46.07 | radiation | 40.0 | 10 | > th | dose independent | rect. | 9 | 3 |
| 833 | 46.07 | radiation | 20.0 | 1440 | < th | dose independent | rect. | 16 | 7 |
| 858 | 46.07 | temperature | 25.0 | 4320 | > th | dose dependent | sin | 22 | NA |
| 883 | 46.08 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 6 | 14 |
| 899 | 46.08 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 18 | 20 |
| 932 | 46.10 | temperature | 30.0 | 90 | < th | dose independent | rect. | 17 | 11 |
| 987 | 46.12 | wind | 9.0 | 720 | < th | dose independent | rect. | 12 | 10 |
| 991 | 46.12 | radiation | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 1000 | 46.12 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 3 | 5 |