BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0659900 Os07g0659900|AK060696
(211 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0659900 Glutaredoxin domain containing protein 386 e-108
Os03g0356400 Glutaredoxin domain containing protein 274 4e-74
Os02g0748800 Glutaredoxin domain containing protein 160 5e-40
Os04g0641300 Glutaredoxin domain containing protein 150 5e-37
Os05g0353600 Glutaredoxin domain containing protein 150 7e-37
Os05g0471100 Glutaredoxin domain containing protein 145 3e-35
Os04g0412800 Glutaredoxin domain containing protein 142 1e-34
Os01g0829400 Glutaredoxin domain containing protein 138 3e-33
Os06g0226100 Glutaredoxin domain containing protein 132 2e-31
Os07g0159900 Glutaredoxin domain containing protein 129 1e-30
Os03g0648800 Glutaredoxin domain containing protein 125 2e-29
Os01g0235900 Glutaredoxin domain containing protein 121 3e-28
Os03g0170800 119 2e-27
Os02g0102000 Glutaredoxin domain containing protein 114 8e-26
Os08g0171333 77 1e-14
Os10g0343900 Thioredoxin fold domain containing protein 70 9e-13
>Os07g0659900 Glutaredoxin domain containing protein
Length = 211
Score = 386 bits (991), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/191 (100%), Positives = 191/191 (100%)
Query: 21 AKKPFHFARSLTYHHHQGHRVLPPAAKWRRHQLADEPRARPKDVVLYTTSLRGVRRTFAD 80
AKKPFHFARSLTYHHHQGHRVLPPAAKWRRHQLADEPRARPKDVVLYTTSLRGVRRTFAD
Sbjct: 21 AKKPFHFARSLTYHHHQGHRVLPPAAKWRRHQLADEPRARPKDVVLYTTSLRGVRRTFAD 80
Query: 81 CSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGADEVK 140
CSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGADEVK
Sbjct: 81 CSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGADEVK 140
Query: 141 QLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRKVFVEEEDRVQRCGDCNE 200
QLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRKVFVEEEDRVQRCGDCNE
Sbjct: 141 QLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRKVFVEEEDRVQRCGDCNE 200
Query: 201 NGLVRCPNCCS 211
NGLVRCPNCCS
Sbjct: 201 NGLVRCPNCCS 211
>Os03g0356400 Glutaredoxin domain containing protein
Length = 203
Score = 274 bits (700), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 142/195 (72%), Positives = 159/195 (81%), Gaps = 8/195 (4%)
Query: 21 AKKPFHFARSLTYHHH----QGHRVLPPAAKWRRHQLADEPRARPKDVVLYTTSLRGVRR 76
+KKP H +RSLTYHHH QG P R+H P+ + VVLYTTSLRGVRR
Sbjct: 13 SKKPRHLSRSLTYHHHHHPYQGQGRSPSFNARRQHH----PQQQDHAVVLYTTSLRGVRR 68
Query: 77 TFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGA 136
TFADC++VRA+LRG RVAVDERDVSMDA+ RREL+SLL ARGR FSLPQLLVG RLVGGA
Sbjct: 69 TFADCAAVRAVLRGLRVAVDERDVSMDASLRRELQSLLAARGRPFSLPQLLVGARLVGGA 128
Query: 137 DEVKQLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRKVFVEEEDRVQRCG 196
DEV+QLHE+G+LRRLL+GAAGQDPA+VC GCGGVRFVPC AC G RKVFV+EE +RCG
Sbjct: 129 DEVRQLHEAGELRRLLEGAAGQDPAFVCGGCGGVRFVPCPACDGSRKVFVQEEGCARRCG 188
Query: 197 DCNENGLVRCPNCCS 211
DCNENGLVRCPNCCS
Sbjct: 189 DCNENGLVRCPNCCS 203
>Os02g0748800 Glutaredoxin domain containing protein
Length = 369
Score = 160 bits (406), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 108/156 (69%), Gaps = 11/156 (7%)
Query: 62 KDVVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAF 121
+ VVLY TSLRG+R+T+ DC + ++IL+G+ V VDERD+SM A F+ EL + L A G
Sbjct: 217 RKVVLYLTSLRGIRKTYEDCWATKSILQGYGVLVDERDLSMHAGFKEELHAALGAPG--- 273
Query: 122 SLPQLLVGGRLVGGADEVKQLHESGQLRRLL-------DGAAGQDPAY-VCDGCGGVRFV 173
SLPQ+ GR +GGA+EV+++HESG+L + L AAG+ A C GCGGVRFV
Sbjct: 274 SLPQVFADGRHLGGAEEVRRMHESGELSKALGDCEMAPPAAAGKGIALDACSGCGGVRFV 333
Query: 174 PCTACGGGRKVFVEEEDRVQRCGDCNENGLVRCPNC 209
PC C G KVF+EE D +RC DCNENGLVRCP C
Sbjct: 334 PCEECSGSCKVFLEELDTFRRCPDCNENGLVRCPLC 369
>Os04g0641300 Glutaredoxin domain containing protein
Length = 443
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/158 (52%), Positives = 106/158 (67%), Gaps = 9/158 (5%)
Query: 62 KDVVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRA- 120
K V+Y TSLRGVR+TF DC SVR+ILR + V +DERDVSM A FR EL LL G A
Sbjct: 285 KKAVVYFTSLRGVRKTFVDCCSVRSILRSYGVRLDERDVSMHAVFRAELAELLGPGGFAC 344
Query: 121 FSLPQLLVGGRLVGGADEVKQLHESGQLRRLLDG---AAGQDPAYV--CDGCGGVRFVPC 175
+LP++ V GR +GGA++V LHE+ +L R+L+G A + Y+ C CG VRFVPC
Sbjct: 345 AALPRVFVDGRYLGGAEDVHALHEAAELARMLEGCEAAPVRKLGYMEACAACGDVRFVPC 404
Query: 176 TACGGGRKVFVEEE---DRVQRCGDCNENGLVRCPNCC 210
C G K+FV+++ +RC DCNENGL+RCP CC
Sbjct: 405 ETCYGSCKIFVDDDVDAGEFRRCPDCNENGLIRCPVCC 442
>Os05g0353600 Glutaredoxin domain containing protein
Length = 248
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 103/148 (69%), Gaps = 3/148 (2%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSL 123
VVLY TSLR VR TF DC VRAILRG RVAVDERDVSMDAA+ ELR+L+ R +L
Sbjct: 102 VVLYFTSLRAVRGTFEDCRDVRAILRGLRVAVDERDVSMDAAYLAELRALM--RRDRPAL 159
Query: 124 PQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRK 183
PQL VGGRLVG ADEV+ LHESG+L R++ GAA A C CGG RFVPC C G +
Sbjct: 160 PQLFVGGRLVGDADEVRLLHESGELHRVVAGAARAA-ATPCASCGGTRFVPCGTCDGSHR 218
Query: 184 VFVEEEDRVQRCGDCNENGLVRCPNCCS 211
+ E+ + C CNENGLVRC CCS
Sbjct: 219 RYSEKTGGFRVCTACNENGLVRCAACCS 246
>Os05g0471100 Glutaredoxin domain containing protein
Length = 257
Score = 145 bits (365), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSL 123
VVLY TSLR VR T+ DC +VRAILRG R AVDERD+SMD AF EL +LL R R +L
Sbjct: 109 VVLYYTSLRVVRGTYEDCRAVRAILRGLRAAVDERDLSMDPAFLPELAALLPHR-RHVAL 167
Query: 124 PQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRK 183
PQ+ V GR +GGA+EV++LHESG+LRR++ AA PA C C G R+V C +C G K
Sbjct: 168 PQVFVNGRHLGGAEEVRRLHESGELRRIV-AAANPTPAS-CGRCAGERYVLCGSCDGSHK 225
Query: 184 VFVEEEDRVQR-CGDCNENGLVRCPNCC 210
+ + R C CNENGLVRCP+CC
Sbjct: 226 RYSHKVGGGFRACAMCNENGLVRCPDCC 253
>Os04g0412800 Glutaredoxin domain containing protein
Length = 448
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 96/147 (65%), Gaps = 5/147 (3%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSL 123
VVLYTT+LRG+RRTF +C++VRA + V + ERDVSMD+ +R ELR LL GR +
Sbjct: 305 VVLYTTTLRGIRRTFEECNAVRAAIEAHDVKLIERDVSMDSGYREELRLLLG--GREVRV 362
Query: 124 PQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYVCDGCGGVRFVPCTACGGGRK 183
P + V GR VGGA EV +L E G+L+ LL G C GC GVRFV C C G RK
Sbjct: 363 PAVFVRGRHVGGAAEVTKLEEEGKLKALLQGLPRAR--VWCAGCAGVRFVMCRDCNGSRK 420
Query: 184 VFVE-EEDRVQRCGDCNENGLVRCPNC 209
V V+ E +CG+CNENGLVRCP C
Sbjct: 421 VRVDGERKETVQCGECNENGLVRCPIC 447
>Os01g0829400 Glutaredoxin domain containing protein
Length = 255
Score = 138 bits (348), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 84/176 (47%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 39 HRVLPPAAKWRRHQLADEPRARPKD----VVLYTTSLRGVRRTFADCSSVRAILRGFRVA 94
HRV A+ R + P A + VVLY TSL VR T+ DC +VRAILRG R +
Sbjct: 77 HRVRVAASALRALRTLQAPHAAVAEADRRVVLYFTSLHVVRSTYEDCRAVRAILRGLRAS 136
Query: 95 VDERDVSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGADEVKQLHESGQLRRLLDG 154
VDERD++MD + +EL +LL R R +LPQ+ VGGR +GGA+EV++LHESG+LRR++ G
Sbjct: 137 VDERDLAMDPRYLQELGALLP-RARGVTLPQVFVGGRHLGGAEEVRRLHESGELRRVVAG 195
Query: 155 AAGQDPAYVCDGCGGVRFVPCTACGGGRKVF-VEEEDRVQRCGDCNENGLVRCPNC 209
A C CGG R+V C +C G K + ++ + C CNENGLVRCP+C
Sbjct: 196 AGATA-FAACSRCGGERYVLCGSCNGSHKRYSLKGGGGFRTCAGCNENGLVRCPDC 250
>Os06g0226100 Glutaredoxin domain containing protein
Length = 383
Score = 132 bits (331), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 27/173 (15%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFS- 122
VV+Y TSLRG+R+T+ DC + +ILR + V VDERD+S+ A ++ ELR+ L
Sbjct: 211 VVVYLTSLRGIRQTYEDCCATASILRSYGVRVDERDLSLHAGYKDELRAALGDGAGGGGG 270
Query: 123 -------LPQLLVGGRLVGGADEVKQLHESGQLRRLL-------------DGAAGQD--- 159
LPQ+ V G VGGA++V+++HESG+L L G G+
Sbjct: 271 VPGQGRPLPQVFVDGCHVGGAEDVRRMHESGELTGTLLKACDTAAAAVAAVGKGGRQLAP 330
Query: 160 PAYVCDGCGGVRFVPCTACGGGRKVFVEEED---RVQRCGDCNENGLVRCPNC 209
P+ C GCGGVRFVPC AC G KVFV++++ +RC +CNENGLVRCP C
Sbjct: 331 PSEPCGGCGGVRFVPCDACSGSCKVFVDDDEDGGAFRRCPECNENGLVRCPVC 383
>Os07g0159900 Glutaredoxin domain containing protein
Length = 256
Score = 129 bits (324), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 91/151 (60%), Gaps = 8/151 (5%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSL 123
VVLYTT+LRG+R+TF DC+ VRA+L VA ERDVSMD R EL S+ G
Sbjct: 108 VVLYTTTLRGIRKTFEDCNGVRALLENLDVAFQERDVSMDRGLRDELWSVT---GEKAVP 164
Query: 124 PQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYV-----CDGCGGVRFVPCTAC 178
P+L V GR VGGA +V LHE G+L LL + ++ + CD CGG+RFV C C
Sbjct: 165 PRLFVRGRDVGGAAQVLALHEDGRLLALLSPGSNKNRSAAAAAAKCDACGGLRFVVCGEC 224
Query: 179 GGGRKVFVEEEDRVQRCGDCNENGLVRCPNC 209
G RKVF E R RC CNENGLV C C
Sbjct: 225 DGSRKVFDGERGRGVRCRGCNENGLVMCALC 255
>Os03g0648800 Glutaredoxin domain containing protein
Length = 324
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 91/149 (61%), Gaps = 3/149 (2%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLDARGRAFSL 123
VVLYTTSLRGVR+TF DC++VR +L G RVA ERDVSM A +R ELR+LL A
Sbjct: 175 VVLYTTSLRGVRKTFEDCATVRRLLEGLRVAFLERDVSMHAPYRDELRALLVGLDDAAVP 234
Query: 124 PQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPA-YVCDGCGGVRFVPCTACGGGR 182
P+L V GR +GGA+EV LHE +LR +L A + C CGG FV C AC G
Sbjct: 235 PRLFVDGRYLGGANEVVTLHEQARLRPVLRRAPRRGAGDAACAVCGGAWFVVCGACSGSH 294
Query: 183 KVFVEEEDRVQR--CGDCNENGLVRCPNC 209
+++ R C CNENGLV CP C
Sbjct: 295 RLYDAAAAAGGRVPCTGCNENGLVPCPLC 323
>Os01g0235900 Glutaredoxin domain containing protein
Length = 391
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 93/173 (53%), Gaps = 23/173 (13%)
Query: 57 PRARPKDVVLYTTSLRGVRRTFADCSSVRAILR----------GFRVAVDERDVSMDAAF 106
P A VVLYTT+LRGVRRTF DC R + G V VDERDVS+ +
Sbjct: 221 PGASGGGVVLYTTTLRGVRRTFEDCERARKAVEACAEAVSAAGGSPVVVDERDVSLHGEY 280
Query: 107 RRELRSLLDARGRAFSLPQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYV--- 163
RELR L G + P+L V GR +GGAD +L ESG+LR ++ A + A
Sbjct: 281 LRELRGLA---GAGDAPPRLFVMGRYLGGADACAELAESGKLREMMRWARARGEACAAKD 337
Query: 164 ---CDGCGGVRFVPCTACGGGRKVFVEEEDR----VQRCGDCNENGLVRCPNC 209
C+GCGG RFVPC CGG KV V+RC CNENGL+ CP C
Sbjct: 338 GRGCEGCGGARFVPCWECGGSCKVVAAGATAAAADVERCAKCNENGLMLCPIC 390
>Os03g0170800
Length = 322
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/181 (46%), Positives = 95/181 (52%), Gaps = 27/181 (14%)
Query: 57 PRARPKDVVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLLD- 115
P ARP+ VLY TSLRGVR T DC RAIL G+ V VDERDVSM FR EL LL
Sbjct: 141 PVARPRKAVLYFTSLRGVRATHEDCCLARAILGGYGVRVDERDVSMHRGFRDELHGLLGL 200
Query: 116 ----------ARGRAFSLPQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDPAYVCD 165
A A +LP L V G LVG ADE+K+LHE+G+L L G P
Sbjct: 201 GRGAALAKCWAPAAAPALPSLFVDGELVGNADELKRLHEAGELAARLAGCESAAPGEAAG 260
Query: 166 GCGG---VRFVPCTACGGGRKVFV-------------EEEDRVQRCGDCNENGLVRCPNC 209
C VRFV C AC G KV+V +RC +CNENG+VRCP C
Sbjct: 261 ACEACADVRFVLCGACSGSCKVYVDDGDDDDENPLDGGGGGGFRRCTECNENGIVRCPVC 320
Query: 210 C 210
C
Sbjct: 321 C 321
>Os02g0102000 Glutaredoxin domain containing protein
Length = 294
Score = 114 bits (284), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 80/165 (48%), Positives = 94/165 (56%), Gaps = 19/165 (11%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRS--LLDARGRAF 121
V+LYTT+LRGVR TF C++VRA L VA ERD+SMD FR ELR LD RA
Sbjct: 129 VLLYTTTLRGVRATFEACNAVRAALHSHGVAFRERDISMDRGFREELRHRISLDHHDRAP 188
Query: 122 SLPQLLVGGRLVGGADEVKQLHESGQLRRLLDGAAGQDP-AYVCDGCGGVRFVPCTACGG 180
+P+L V G VGGA EV +L E G+L LL+G P CDGCGG+RF+PC C G
Sbjct: 189 LVPRLFVRGNHVGGAAEVARLEEEGKLAALLEGLPRARPGGGCCDGCGGMRFLPCFDCNG 248
Query: 181 GRKVFVEEEDRVQ----------------RCGDCNENGLVRCPNC 209
RK+ V RCG+CNENGLV CP C
Sbjct: 249 SRKLCFSLPTPVPAAAAARSNKTRAVVVVRCGECNENGLVLCPIC 293
>Os08g0171333
Length = 316
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 49/67 (73%), Gaps = 1/67 (1%)
Query: 64 VVLYTTSLRGVRRTFADCSSVRAILRGFRVAVDERDVSMDAAFRRELRSLL-DARGRAFS 122
VV+Y TSLRGVRRTF D +VRAILRG RV VDERDVSM AAFR ELR LL D
Sbjct: 233 VVVYFTSLRGVRRTFEDGRAVRAILRGHRVRVDERDVSMHAAFRAELRGLLGDGFAGPPP 292
Query: 123 LPQLLVG 129
LP++ VG
Sbjct: 293 LPRVFVG 299
>Os10g0343900 Thioredoxin fold domain containing protein
Length = 132
Score = 70.5 bits (171), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 64/101 (63%), Gaps = 4/101 (3%)
Query: 95 VDERD--VSMDAAFRRELRSLLDARGRAFSLPQLLVGGRLVGGADEVKQLHESGQLRRLL 152
VD R ++MD + +EL +LL R R +LPQ+ VGGR +GGA+EV++LHESG+LRR++
Sbjct: 21 VDSRRPLLAMDPRYLQELGALL-PRARGVTLPQVFVGGRHLGGAEEVRRLHESGELRRVV 79
Query: 153 DGAAGQDPAYVCDGCGGVRFVPCTACGGGRKVFVEEEDRVQ 193
AG C CGG R+V C +C G K + +E V+
Sbjct: 80 A-GAGATALAACSRCGGERYVLCGSCNGSHKRYSLKEATVR 119
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,811,476
Number of extensions: 360093
Number of successful extensions: 1494
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 1452
Number of HSP's successfully gapped: 16
Length of query: 211
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 115
Effective length of database: 12,023,257
Effective search space: 1382674555
Effective search space used: 1382674555
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 154 (63.9 bits)