Os03g0648800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os03g0648800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 123.97 | 0.523 | 7.97 | 0.832 | 0.608 | -1.18 | 1.17 | -0.425 | -0.405 | 7.9 | 21.6 | 1410 | -- | -- |
| 124.16 | 0.519 | 7.95 | 0.864 | 0.616 | -1.06 | 1.2 | -- | -0.37 | 7.91 | 22 | 1455 | -- | -- |
| 127.95 | 0.527 | 7.97 | 0.869 | 0.604 | -1.19 | -- | -0.44 | -0.402 | 8.08 | 21.6 | 1437 | -- | -- |
| 128.29 | 0.528 | 7.95 | 0.894 | 0.623 | -1.06 | -- | -- | -0.374 | 8.1 | 22.04 | 1458 | -- | -- |
| 139.07 | 0.549 | 7.98 | 0.76 | -- | -1.06 | -- | -0.338 | -0.393 | -- | 22.1 | 792 | -- | -- |
| 163.98 | 0.6 | 8.03 | 0.468 | 0.609 | -- | 1.12 | -- | -0.716 | 8.11 | -- | -- | -- | -- |
| 167.66 | 0.606 | 8.03 | 0.502 | 0.605 | -- | -- | -- | -0.716 | 8.38 | -- | -- | -- | -- |
| 139.49 | 0.55 | 7.97 | 0.849 | -- | -1.04 | -- | -- | -0.383 | -- | 22 | 780 | -- | -- |
| 145.55 | 0.562 | 7.99 | -- | 0.555 | -0.78 | -- | -- | -0.549 | 7.34 | 22.4 | 976 | -- | -- |
| 188.04 | 0.641 | 8.05 | 0.505 | -- | -- | -- | -- | -0.709 | -- | -- | -- | -- | -- |
| 174.3 | 0.618 | 8.04 | -- | 0.608 | -- | -- | -- | -0.771 | 8.32 | -- | -- | -- | -- |
| 157.28 | 0.584 | 8 | -- | -- | -0.865 | -- | -- | -0.506 | -- | 22.26 | 761 | -- | -- |
| 194.77 | 0.651 | 8.06 | -- | -- | -- | -- | -- | -0.765 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 123.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 10 | 125.65 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 19 | 126.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 33 | 126.70 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 5 |
| 41 | 126.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 12 |
| 49 | 126.93 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 91 | 127.45 | temperature | 25 | 1440 | < th | dose dependent | sin | 14 | NA |
| 101 | 127.51 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 132 | 127.76 | wind | 9 | 14400 | > th | dose independent | rect. | 4 | 9 |
| 153 | 127.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 16 | 18 |
| 197 | 128.11 | wind | 9 | 14400 | > th | dose dependent | rect. | 5 | 8 |
| 272 | 128.42 | temperature | 15 | 270 | > th | dose dependent | sin | 8 | NA |
| 290 | 128.50 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 412 | 129.04 | wind | 9 | 14400 | < th | dose independent | rect. | 4 | 9 |
| 416 | 129.05 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 466 | 129.28 | wind | 9 | 14400 | < th | dose independent | rect. | 2 | 11 |
| 472 | 129.31 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 513 | 129.42 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 530 | 129.47 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 547 | 129.55 | wind | 9 | 14400 | < th | dose independent | rect. | 5 | 7 |
| 633 | 129.80 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 635 | 129.81 | wind | 9 | 14400 | > th | dose independent | rect. | 9 | 3 |
| 640 | 129.82 | temperature | 25 | 4320 | < th | dose independent | rect. | 19 | 8 |
| 646 | 129.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 823 | 130.35 | wind | 9 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 886 | 130.54 | wind | 9 | 14400 | < th | dose independent | rect. | 23 | 14 |