Os01g0235900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os01g0235900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = rect.)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 85.91 | 0.435 | 13.1 | -0.16 | 2.35 | -2.12 | 0.888 | -1.32 | -0.136 | 7.17 | 0.2695 | 87 | 13.3 | 4.32 |
| 86.19 | 0.432 | 13.1 | -0.101 | 2.38 | -1.96 | 1.22 | -- | -0.141 | 7.1 | -0.5528 | 101 | 13.4 | 4.08 |
| 86.99 | 0.434 | 13.1 | -0.127 | 2.35 | -2.06 | -- | -1.86 | -0.124 | 7.14 | -0.4487 | 89 | 13.5 | 4.12 |
| 89.3 | 0.44 | 13.1 | -0.07 | 2.33 | -1.95 | -- | -- | -0.127 | 7.14 | -2.044 | 101 | 13.5 | 3.94 |
| 137.28 | 0.546 | 13.1 | -0.277 | -- | -3.32 | -- | -1.43 | -0.0615 | -- | -13.8 | 457 | 9.4 | 10.2 |
| 138.07 | 0.551 | 13.1 | -0.075 | 2.99 | -- | 0.875 | -- | -0.219 | 6.65 | -- | -- | -- | -- |
| 140 | 0.554 | 13.1 | -0.0616 | 2.99 | -- | -- | -- | -0.222 | 6.64 | -- | -- | -- | -- |
| 136.89 | 0.545 | 13.2 | -0.16 | -- | -3.21 | -- | -- | -0.162 | -- | -18.75 | 433 | 9.5 | 10.9 |
| 89.38 | 0.44 | 13.1 | -- | 2.35 | -1.87 | -- | -- | -0.14 | 7.15 | -2.545 | 101 | 13.4 | 3.99 |
| 607.31 | 1.15 | 13.2 | 0.00924 | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
| 140.1 | 0.554 | 13.1 | -- | 2.99 | -- | -- | -- | -0.215 | 6.64 | -- | -- | -- | -- |
| 135.83 | 0.543 | 13.2 | -- | -- | -2.97 | -- | -- | -0.175 | -- | -29.17 | 403 | 9.77 | 11 |
| 607.31 | 1.15 | 13.2 | -- | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 90.19 | wind | 1.0 | 90 | > th | dose dependent | rect. | 13 | 5 |
| 2 | 90.98 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 15 | 22 |
| 3 | 90.98 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 15 | 22 |
| 4 | 91.11 | atmosphere | 995.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 5 | 91.27 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 6 | 91.47 | wind | 1.0 | 90 | > th | dose dependent | rect. | 14 | 3 |
| 8 | 91.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 13 | 2 |
| 9 | 91.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 11 | 91.56 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 13 | 2 |
| 13 | 91.56 | temperature | 10.0 | 270 | > th | dose independent | rect. | 15 | 22 |
| 14 | 91.67 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 14 | 4 |
| 17 | 92.00 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 13 | 2 |
| 18 | 92.00 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 22 | 92.74 | humidity | 90.0 | 270 | < th | dose independent | rect. | 13 | 2 |
| 23 | 92.80 | wind | 9.0 | 270 | < th | dose independent | rect. | 15 | 22 |
| 25 | 92.96 | humidity | 50.0 | 270 | > th | dose independent | rect. | 13 | 3 |
| 29 | 93.03 | wind | 3.0 | 90 | > th | dose independent | rect. | 14 | 3 |
| 30 | 93.08 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 17 | 21 |
| 31 | 93.08 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 17 | 21 |
| 32 | 93.22 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 5 |
| 33 | 93.24 | humidity | 60.0 | 10 | > th | dose independent | rect. | 14 | 4 |
| 34 | 93.35 | wind | 5.0 | 90 | > th | dose independent | rect. | 13 | 5 |
| 37 | 93.78 | temperature | 30.0 | 30 | < th | dose independent | rect. | 14 | 4 |
| 53 | 94.52 | radiation | 40.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 58 | 94.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 14 | 4 |
| 60 | 94.64 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 62 | 94.64 | temperature | 10.0 | 10 | > th | dose independent | rect. | 18 | 20 |
| 71 | 94.72 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 18 | 20 |
| 79 | 94.83 | wind | 9.0 | 10 | < th | dose independent | rect. | 14 | 4 |
| 82 | 94.90 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 14 | 4 |
| 87 | 95.04 | wind | 9.0 | 30 | < th | dose independent | rect. | 18 | 20 |
| 88 | 95.07 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 14 | 4 |
| 89 | 95.07 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 101 | 95.35 | radiation | 1.0 | 270 | > th | dose independent | rect. | 13 | 2 |
| 161 | 96.81 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 14 | 3 |
| 162 | 97.00 | temperature | 30.0 | 270 | < th | dose independent | rect. | 14 | 1 |
| 276 | 99.07 | humidity | 50.0 | 90 | > th | dose independent | rect. | 18 | 19 |
| 322 | 100.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 326 | 100.01 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 19 | 20 |
| 348 | 100.49 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 355 | 100.57 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 15 | 2 |
| 382 | 100.94 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 14 | 4 |
| 483 | 102.32 | wind | 1.0 | 90 | > th | dose independent | rect. | 17 | 21 |
| 536 | 102.79 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 13 | 4 |
| 558 | 103.12 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 14 | 4 |
| 563 | 103.18 | radiation | 1.0 | 270 | > th | dose dependent | rect. | 13 | 2 |
| 600 | 103.61 | atmosphere | 1015.0 | 30 | < th | dose independent | rect. | 18 | 20 |
| 613 | 103.86 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 18 | 20 |
| 638 | 104.13 | wind | 9.0 | 270 | < th | dose dependent | rect. | 13 | 2 |
| 684 | 104.43 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 14 |
| 685 | 104.43 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 687 | 104.46 | atmosphere | 1015.0 | 1440 | < th | dose independent | rect. | 15 | 4 |
| 714 | 104.62 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 19 | 19 |
| 804 | 105.45 | radiation | 1.0 | 270 | > th | dose independent | rect. | 17 | 19 |
| 831 | 105.78 | humidity | 50.0 | 270 | > th | dose independent | rect. | 12 | 19 |
| 873 | 106.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 874 | 106.39 | temperature | 30.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 875 | 106.39 | humidity | 50.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 877 | 106.39 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 21 | 10 |
| 878 | 106.39 | radiation | 40.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 879 | 106.39 | temperature | 10.0 | 270 | > th | dose independent | rect. | 7 | 14 |
| 905 | 106.58 | wind | 9.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 959 | 106.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 21 | 10 |
| 960 | 106.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 21 | 10 |
| 995 | 107.09 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 10 |
| 996 | 107.09 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 10 |