Os07g0659900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os07g0659900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.24 | 0.371 | 11.5 | 0.223 | 2.26 | 1.13 | 0.297 | 1.54 | -0.0365 | 6.44 | 11.22 | 9 | -- | -- |
| 64.18 | 0.376 | 11.5 | 0.0187 | 2.25 | 1.1 | 0.194 | -- | -0.0922 | 6.45 | 15.23 | 16 | -- | -- |
| 62.41 | 0.371 | 11.5 | 0.225 | 2.26 | 1.13 | -- | 1.51 | -0.037 | 6.43 | 11.22 | 9 | -- | -- |
| 64.23 | 0.376 | 11.5 | 0.0211 | 2.25 | 1.11 | -- | -- | -0.0931 | 6.44 | 15.4 | 8 | -- | -- |
| 311.88 | 0.827 | 11.5 | 0.42 | -- | 0.0381 | -- | 0.915 | 0.138 | -- | 18.8 | 7 | -- | -- |
| 76.69 | 0.411 | 11.5 | 0.236 | 2.12 | -- | 0.265 | -- | 0.0683 | 6.98 | -- | -- | -- | -- |
| 76.87 | 0.411 | 11.5 | 0.241 | 2.12 | -- | -- | -- | 0.0674 | 6.96 | -- | -- | -- | -- |
| 257.9 | 0.748 | 11.5 | 0.614 | -- | -1.43 | -- | -- | 0.182 | -- | 24.7 | 493 | -- | -- |
| 64.25 | 0.375 | 11.5 | -- | 2.25 | 1.12 | -- | -- | -0.0966 | 6.43 | 15.4 | 8 | -- | -- |
| 312.9 | 0.827 | 11.5 | 0.284 | -- | -- | -- | -- | 0.107 | -- | -- | -- | -- | -- |
| 78.39 | 0.414 | 11.5 | -- | 2.12 | -- | -- | -- | 0.0406 | 6.95 | -- | -- | -- | -- |
| 264.54 | 0.758 | 11.5 | -- | -- | -1.31 | -- | -- | 0.153 | -- | 24.8 | 493 | -- | -- |
| 315.03 | 0.828 | 11.6 | -- | -- | -- | -- | -- | 0.0753 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 59.69 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 15 |
| 2 | 59.98 | temperature | 10 | 720 | > th | dose dependent | sin | 8 | NA |
| 4 | 60.11 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 6 | 60.22 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 8 | 60.26 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 9 |
| 19 | 60.53 | temperature | 20 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 24 | 60.67 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 28 | 60.79 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 33 | 60.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 14 |
| 34 | 60.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 41 | 61.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 54 | 61.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 61 | 61.24 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 97 | 61.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 98 | 61.63 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 23 |
| 99 | 61.64 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 1 |
| 105 | 61.69 | temperature | 10 | 10 | > th | dose dependent | sin | 5 | NA |
| 138 | 61.85 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 140 | 61.85 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 12 |
| 142 | 61.85 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 21 |
| 162 | 61.96 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 10 |
| 178 | 62.03 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 205 | 62.16 | temperature | 30 | 10 | < th | dose dependent | sin | 8 | NA |
| 227 | 62.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 232 | 62.28 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 247 | 62.33 | temperature | 20 | 270 | > th | dose independent | rect. | 3 | 18 |
| 257 | 62.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 333 | 62.59 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 409 | 62.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 410 | 62.89 | temperature | 20 | 270 | > th | dose independent | rect. | 4 | 15 |
| 423 | 62.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 458 | 63.05 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 484 | 63.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 17 |
| 519 | 63.22 | temperature | 10 | 10 | > th | dose dependent | sin | 7 | NA |
| 664 | 63.70 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 717 | 63.86 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 17 |
| 726 | 63.89 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 741 | 63.93 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 3 |
| 746 | 63.94 | temperature | 20 | 270 | > th | dose independent | rect. | 2 | 9 |
| 775 | 64.03 | temperature | 25 | 720 | < th | dose independent | rect. | 3 | 6 |
| 796 | 64.06 | temperature | 30 | 10 | < th | dose dependent | rect. | 18 | 16 |
| 836 | 64.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 4 | 1 |
| 919 | 64.37 | temperature | 30 | 270 | < th | dose independent | rect. | 9 | 7 |
| 921 | 64.37 | temperature | 20 | 10 | > th | dose dependent | rect. | 10 | 23 |
| 930 | 64.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 21 |
| 941 | 64.42 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 959 | 64.45 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 981 | 64.48 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |