Os02g0102000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os02g0102000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 308.22 | 0.825 | 5.49 | 0.629 | 0.277 | 2.59 | 1.68 | -0.729 | -1.11 | 5.67 | 25 | 659 | -- | -- |
| 308.85 | 0.819 | 5.5 | 0.513 | 0.254 | 2.68 | 1.62 | -- | -1.13 | 5.43 | 25 | 650 | -- | -- |
| 310.77 | 0.821 | 5.52 | 0.471 | 0.47 | 2.7 | -- | 0.163 | -1.23 | 8.44 | 23.5 | 615 | -- | -- |
| 310.63 | 0.821 | 5.52 | 0.475 | 0.456 | 2.68 | -- | -- | -1.22 | 8.85 | 23.65 | 575 | -- | -- |
| 317.89 | 0.83 | 5.51 | 0.557 | -- | 2.69 | -- | -0.184 | -1.1 | -- | 25.56 | 601 | -- | -- |
| 407.5 | 0.946 | 5.62 | -0.219 | 0.725 | -- | 0.0114 | -- | -1.69 | 8.84 | -- | -- | -- | -- |
| 407.51 | 0.945 | 5.62 | -0.218 | 0.725 | -- | -- | -- | -1.69 | 8.85 | -- | -- | -- | -- |
| 317.95 | 0.83 | 5.51 | 0.526 | -- | 2.71 | -- | -- | -1.1 | -- | 25.46 | 602 | -- | -- |
| 315.89 | 0.828 | 5.54 | -- | 0.482 | 2.46 | -- | -- | -1.3 | 8.86 | 23.73 | 560 | -- | -- |
| 437.44 | 0.977 | 5.64 | -0.218 | -- | -- | -- | -- | -1.69 | -- | -- | -- | -- | -- |
| 408.76 | 0.946 | 5.62 | -- | 0.724 | -- | -- | -- | -1.67 | 8.87 | -- | -- | -- | -- |
| 324.4 | 0.839 | 5.53 | -- | -- | 2.5 | -- | -- | -1.2 | -- | 25.6 | 587 | -- | -- |
| 438.69 | 0.978 | 5.64 | -- | -- | -- | -- | -- | -1.66 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 307.69 | temperature | 25 | 720 | < th | dose dependent | rect. | 24 | 23 |
| 2 | 307.74 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 22 |
| 8 | 308.19 | temperature | 25 | 720 | < th | dose dependent | rect. | 14 | 22 |
| 18 | 308.39 | temperature | 25 | 720 | < th | dose dependent | rect. | 21 | 23 |
| 30 | 308.84 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 31 | 308.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 11 | 23 |
| 44 | 309.27 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 104 | 313.18 | temperature | 25 | 720 | < th | dose dependent | sin | 11 | NA |
| 138 | 315.80 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 170 | 318.18 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 21 |
| 173 | 318.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 215 | 319.26 | temperature | 20 | 720 | > th | dose independent | rect. | 11 | 20 |
| 265 | 319.96 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 12 |
| 311 | 320.56 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 340 | 320.96 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 456 | 322.06 | temperature | 10 | 720 | > th | dose dependent | sin | 11 | NA |
| 501 | 322.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 633 | 323.07 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 865 | 324.84 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 995 | 325.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 19 |