Os05g0353600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os05g0353600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 111.56 | 0.496 | 7.39 | 2.57 | 1.36 | -1.88 | 1.31 | 2.78 | 0.293 | 7.09 | 17.84 | 1615 | -- | -- |
| 120.89 | 0.512 | 7.46 | 2.22 | 1.45 | -2.01 | 1.27 | -- | 0.265 | 6.93 | 14.2 | 7224 | -- | -- |
| 115.98 | 0.502 | 7.39 | 2.57 | 1.38 | -1.89 | -- | 2.71 | 0.289 | 6.98 | 17.68 | 1581 | -- | -- |
| 124.72 | 0.52 | 7.45 | 2.28 | 1.42 | -2.1 | -- | -- | 0.251 | 6.85 | 12.21 | 7236 | -- | -- |
| 194 | 0.649 | 7.41 | 2.72 | -- | -2.13 | -- | 2.68 | 0.371 | -- | 18.32 | 2032 | -- | -- |
| 195.32 | 0.655 | 7.57 | 1.18 | 1.39 | -- | 1.35 | -- | -0.299 | 7.14 | -- | -- | -- | -- |
| 200.09 | 0.662 | 7.57 | 1.21 | 1.4 | -- | -- | -- | -0.302 | 7.05 | -- | -- | -- | -- |
| 200.88 | 0.66 | 7.5 | 2.01 | -- | -2.1 | -- | -- | 0.171 | -- | 17.76 | 2040 | -- | -- |
| 200.26 | 0.659 | 7.55 | -- | 1.34 | -1.21 | -- | -- | -0.254 | 6.16 | 19.8 | 949 | -- | -- |
| 303.24 | 0.814 | 7.6 | 1.23 | -- | -- | -- | -- | -0.277 | -- | -- | -- | -- | -- |
| 238.38 | 0.722 | 7.6 | -- | 1.41 | -- | -- | -- | -0.437 | 7 | -- | -- | -- | -- |
| 231 | 0.708 | 7.56 | -- | -- | -2.1 | -- | -- | -0.11 | -- | 19.3 | 501 | -- | -- |
| 343.34 | 0.865 | 7.63 | -- | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 109.26 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 4 | 110.52 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 6 | 110.66 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 6 |
| 7 | 110.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 10 | 110.78 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 19 | 110.99 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 23 | 111.12 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 8 |
| 49 | 111.60 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 73 | 111.84 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 12 |
| 81 | 111.94 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 85 | 111.96 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 86 | 111.97 | temperature | 15 | 1440 | > th | dose dependent | sin | 12 | NA |
| 99 | 112.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 147 | 112.35 | temperature | 20 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 152 | 112.37 | temperature | 30 | 1440 | < th | dose dependent | sin | 12 | NA |
| 183 | 112.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 12 | 23 |
| 184 | 112.58 | wind | 9 | 43200 | > th | dose independent | rect. | 18 | 6 |
| 202 | 112.65 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 6 |
| 223 | 112.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 247 | 112.88 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 251 | 112.92 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 319 | 113.18 | temperature | 15 | 1440 | > th | dose dependent | rect. | 24 | 10 |
| 353 | 113.32 | wind | 9 | 43200 | < th | dose independent | rect. | 18 | 7 |
| 375 | 113.39 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 416 | 113.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 564 | 114.11 | temperature | 15 | 1440 | > th | dose dependent | no | NA | NA |
| 567 | 114.13 | temperature | 15 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 576 | 114.15 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 592 | 114.19 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 608 | 114.25 | temperature | 15 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 614 | 114.27 | temperature | 15 | 1440 | > th | dose dependent | rect. | 6 | 23 |
| 635 | 114.36 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 668 | 114.43 | temperature | 15 | 1440 | > th | dose dependent | rect. | 2 | 23 |
| 769 | 114.71 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 780 | 114.73 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 828 | 114.82 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 23 |
| 832 | 114.83 | temperature | 30 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 859 | 114.89 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 886 | 114.93 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 900 | 114.95 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 962 | 115.07 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 2 |