Os04g0412800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os04g0412800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 213 | 0.686 | 6.55 | 0.331 | 3.76 | -1.7 | 1.63 | -8.02 | -0.704 | 5.67 | 1.131 | 1462 | -- | -- |
| 225.86 | 0.7 | 6.69 | -0.469 | 4 | -1.21 | 1.49 | -- | -0.969 | 5.64 | 25.44 | 3324 | -- | -- |
| 219.55 | 0.69 | 6.55 | 0.336 | 3.77 | -1.73 | -- | -8.05 | -0.707 | 5.67 | 1.109 | 1460 | -- | -- |
| 230.65 | 0.707 | 6.69 | -0.43 | 4 | -1.18 | -- | -- | -0.944 | 5.68 | 62.01 | 3381 | -- | -- |
| 954.17 | 1.44 | 6.6 | 0.515 | -- | -1.78 | -- | -8.37 | -0.631 | -- | 1.343 | 1448 | -- | -- |
| 248.57 | 0.739 | 6.66 | -0.469 | 3.79 | -- | 1.74 | -- | -0.806 | 5.73 | -- | -- | -- | -- |
| 255.98 | 0.749 | 6.66 | -0.459 | 3.8 | -- | -- | -- | -0.814 | 5.72 | -- | -- | -- | -- |
| 969.28 | 1.45 | 6.78 | -0.24 | -- | -0.942 | -- | -- | -0.99 | -- | 58.97 | 12918 | -- | -- |
| 235.6 | 0.715 | 6.68 | -- | 3.99 | -1.18 | -- | -- | -0.896 | 5.7 | 82.76 | 3399 | -- | -- |
| 1006.35 | 1.48 | 6.72 | -0.339 | -- | -- | -- | -- | -0.723 | -- | -- | -- | -- | -- |
| 261.53 | 0.756 | 6.65 | -- | 3.8 | -- | -- | -- | -0.763 | 5.73 | -- | -- | -- | -- |
| 966.61 | 1.45 | 6.8 | -- | -- | -0.998 | -- | -- | -1.08 | -- | 73.02 | 18692 | -- | -- |
| 1009.38 | 1.48 | 6.71 | -- | -- | -- | -- | -- | -0.686 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 198.49 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 2 | 4 |
| 20 | 200.45 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 30 | 201.22 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 5 |
| 31 | 201.22 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 5 |
| 47 | 201.74 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 52 | 201.97 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 9 | 5 |
| 58 | 202.23 | wind | 9.0 | 43200 | < th | dose dependent | rect. | 2 | 7 |
| 74 | 202.59 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 2 | 7 |
| 78 | 202.67 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 3 |
| 86 | 202.80 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 9 | 6 |
| 89 | 202.90 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 90 | 202.90 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 4 |
| 94 | 203.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 9 | 5 |
| 95 | 203.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 9 | 5 |
| 96 | 203.07 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 98 | 203.12 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 100 | 203.17 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 3 |
| 115 | 203.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 14 | 1 |
| 125 | 203.73 | wind | 5.0 | 14400 | < th | dose dependent | rect. | 14 | 1 |
| 132 | 203.87 | wind | 1.0 | 43200 | < th | dose independent | rect. | 5 | 1 |
| 147 | 204.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 154 | 204.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 155 | 204.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 11 | 4 |
| 159 | 204.31 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 8 | 1 |
| 170 | 204.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 182 | 204.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 188 | 204.81 | wind | 3.0 | 14400 | < th | dose independent | rect. | 14 | 1 |
| 193 | 204.83 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 4 |
| 196 | 204.86 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 197 | 204.86 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 216 | 205.13 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 222 | 205.18 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 18 | 2 |
| 244 | 205.46 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 11 | 4 |
| 250 | 205.50 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 256 | 205.56 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 11 | 4 |
| 274 | 205.73 | temperature | 10.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 349 | 206.15 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 360 | 206.21 | humidity | 70.0 | 14400 | < th | dose independent | rect. | 11 | 2 |
| 363 | 206.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 5 | 12 |
| 366 | 206.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 5 | 12 |
| 367 | 206.23 | wind | 3.0 | 43200 | > th | dose independent | rect. | 3 | 6 |
| 374 | 206.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 5 | 12 |
| 376 | 206.28 | wind | 3.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 381 | 206.28 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 24 | 16 |
| 397 | 206.32 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 417 | 206.35 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 12 | 4 |
| 425 | 206.40 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 555 | 206.59 | temperature | 30.0 | 14400 | < th | dose independent | sin | 0 | NA |
| 636 | 206.72 | temperature | 30.0 | 14400 | > th | dose independent | sin | 0 | NA |
| 707 | 206.80 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 7 |
| 723 | 206.80 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 12 |
| 753 | 206.83 | wind | 5.0 | 43200 | < th | dose independent | rect. | 5 | 5 |
| 763 | 206.85 | wind | 3.0 | 43200 | < th | dose independent | rect. | 3 | 6 |
| 788 | 206.87 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 7 | 17 |
| 809 | 206.88 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 970 | 206.98 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 21 | NA |
| 974 | 206.99 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |