Os06g0226100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os06g0226100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 92.7 | 0.452 | 10.2 | 0.806 | 0.741 | 2.31 | 0.641 | 0.511 | -0.0625 | 7.65 | 25.1 | 1417 | -- | -- |
| 92.96 | 0.449 | 10.2 | 0.9 | 0.741 | 2.25 | 0.612 | -- | -0.0459 | 7.67 | 25.3 | 1437 | -- | -- |
| 93.85 | 0.451 | 10.2 | 0.833 | 0.74 | 2.31 | -- | 0.455 | -0.0608 | 7.72 | 25.1 | 1433 | -- | -- |
| 94.04 | 0.452 | 10.2 | 0.916 | 0.741 | 2.26 | -- | -- | -0.0395 | 7.77 | 25.3 | 1453 | -- | -- |
| 97.34 | 0.46 | 10.2 | 0.933 | -- | 2.42 | -- | -0.66 | -0.115 | -- | 33.54 | 611 | -- | -- |
| 161.68 | 0.596 | 10.3 | 0.212 | 0.711 | -- | 0.69 | -- | -0.521 | 8.05 | -- | -- | -- | -- |
| 163.09 | 0.598 | 10.3 | 0.232 | 0.71 | -- | -- | -- | -0.521 | 8.14 | -- | -- | -- | -- |
| 97.71 | 0.46 | 10.2 | 0.835 | -- | 2.44 | -- | -- | -0.14 | -- | 33.3 | 609 | -- | -- |
| 112.66 | 0.494 | 10.2 | -- | 0.749 | 1.79 | -- | -- | -0.223 | 7.5 | 25.49 | 1337 | -- | -- |
| 190.78 | 0.645 | 10.3 | 0.238 | -- | -- | -- | -- | -0.512 | -- | -- | -- | -- | -- |
| 164.51 | 0.6 | 10.3 | -- | 0.711 | -- | -- | -- | -0.547 | 8.11 | -- | -- | -- | -- |
| 113.92 | 0.497 | 10.3 | -- | -- | 2.16 | -- | -- | -0.278 | -- | 58.99 | 589 | -- | -- |
| 192.27 | 0.647 | 10.3 | -- | -- | -- | -- | -- | -0.539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 86.95 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 13 |
| 25 | 87.88 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 30 | 87.97 | temperature | 25 | 1440 | < th | dose dependent | sin | 12 | NA |
| 35 | 88.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 1 | 4 |
| 57 | 88.36 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 4 |
| 62 | 88.45 | temperature | 15 | 1440 | > th | dose dependent | rect. | 3 | 2 |
| 89 | 88.66 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 9 |
| 114 | 88.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 358 | 90.44 | temperature | 15 | 1440 | > th | dose dependent | sin | 11 | NA |
| 704 | 92.73 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 745 | 93.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 24 | 23 |
| 749 | 93.06 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 791 | 93.29 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 944 | 94.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 967 | 94.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 993 | 94.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |