Os02g0748800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Glutaredoxin domain containing protein.
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Os02g0748800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Glutaredoxin domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.24 | 0.756 | 6.96 | -1.65 | 0.806 | 2.57 | 1.09 | -1.22 | -0.501 | 0.935 | 23.01 | 957 | 9.91 | -- |
| 259.64 | 0.75 | 6.93 | -1.37 | 0.847 | 2.46 | 0.894 | -- | -0.445 | 0.631 | 22.9 | 972 | 9.7 | -- |
| 263.31 | 0.756 | 6.94 | -1.52 | 0.793 | 2.55 | -- | -0.27 | -0.482 | 0.569 | 22.83 | 964 | 9.75 | -- |
| 263.17 | 0.756 | 6.93 | -1.43 | 0.825 | 2.51 | -- | -- | -0.453 | 0.554 | 22.9 | 964 | 9.63 | -- |
| 276.19 | 0.774 | 6.88 | -1.13 | -- | 3.24 | -- | 2.62 | -0.437 | -- | 18.17 | 788 | 9.99 | -- |
| 415.26 | 0.955 | 6.85 | -0.766 | 1.67 | -- | 1.54 | -- | -0.0934 | 1.48 | -- | -- | -- | -- |
| 424.84 | 0.965 | 6.86 | -0.817 | 1.67 | -- | -- | -- | -0.102 | 1.46 | -- | -- | -- | -- |
| 280.67 | 0.78 | 6.94 | -1.53 | -- | 3.3 | -- | -- | -0.549 | -- | 19.78 | 819 | 10 | -- |
| 313.39 | 0.824 | 6.89 | -- | 0.882 | 2.25 | -- | -- | -0.258 | 0.494 | 23 | 909 | 8.86 | -- |
| 596.87 | 1.14 | 6.83 | -0.751 | -- | -- | -- | -- | -0.0661 | -- | -- | -- | -- | -- |
| 442.44 | 0.984 | 6.84 | -- | 1.66 | -- | -- | -- | -0.0109 | 1.44 | -- | -- | -- | -- |
| 336.54 | 0.854 | 6.9 | -- | -- | 3.01 | -- | -- | -0.363 | -- | 20.8 | 750 | 9.17 | -- |
| 611.74 | 1.15 | 6.82 | -- | -- | -- | -- | -- | 0.0172 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 265.93 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 6 | 273.41 | temperature | 20 | 720 | > th | dose dependent | sin | 15 | NA |
| 13 | 275.80 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 10 |
| 15 | 276.19 | temperature | 20 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 55 | 280.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 9 |
| 135 | 285.45 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 10 |
| 141 | 285.58 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 6 |
| 172 | 285.70 | temperature | 30 | 720 | < th | dose dependent | sin | 16 | NA |
| 178 | 285.87 | temperature | 30 | 1440 | > th | dose independent | sin | 15 | NA |
| 209 | 286.31 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 211 | 286.35 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 17 |
| 213 | 286.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 5 |
| 220 | 286.44 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 239 | 286.61 | temperature | 30 | 1440 | < th | dose independent | sin | 16 | NA |
| 419 | 288.10 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 484 | 288.41 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 522 | 288.72 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 549 | 289.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 555 | 289.10 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 648 | 289.11 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 650 | 289.13 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 661 | 289.17 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 672 | 289.20 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 23 |
| 673 | 289.21 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 676 | 289.22 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 13 |
| 684 | 289.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 685 | 289.26 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 693 | 289.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 23 |
| 706 | 289.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 21 |
| 709 | 289.30 | temperature | 30 | 1440 | < th | dose independent | rect. | 6 | 19 |
| 832 | 290.08 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 909 | 290.52 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |