BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0587500 Os07g0587500|J013002M12
(362 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0587500 Armadillo-like helical domain containing protein 550 e-157
Os03g0435300 Armadillo-like helical domain containing protein 359 1e-99
Os07g0584900 Armadillo-like helical domain containing protein 203 2e-52
Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 195 4e-50
Os01g0884400 U box domain containing protein 182 2e-46
Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2... 149 2e-36
Os02g0732200 U box domain containing protein 146 3e-35
Os03g0275900 Similar to Spotted leaf protein 11 (Spotted le... 131 8e-31
Os12g0570000 Similar to Spotted leaf protein 11 (Spotted le... 119 4e-27
Os06g0726900 Similar to Arm repeat containing protein 108 6e-24
Os08g0481200 Similar to Arm repeat containing protein 105 7e-23
Os02g0488701 U box domain containing protein 79 4e-15
Os02g0234300 U box domain containing protein 79 5e-15
Os05g0476700 Similar to Arm repeat protein 69 8e-12
>Os07g0587500 Armadillo-like helical domain containing protein
Length = 362
Score = 550 bits (1417), Expect = e-157, Method: Compositional matrix adjust.
Identities = 294/362 (81%), Positives = 294/362 (81%)
Query: 1 MESDASTSPRRRXXXXXXXXXXXXXXXXXXXCGSDDLSFTPAAAAGIHRLLLSCAAEASD 60
MESDASTSPRRR CGSDDLSFTPAAAAGIHRLLLSCAAEASD
Sbjct: 1 MESDASTSPRRRSTSCYSDSGDSSCSEPFSECGSDDLSFTPAAAAGIHRLLLSCAAEASD 60
Query: 61 GTISSLVAXXXXXXXXXXXXXXXXXXXXXXXKHNPDNRIRIAAAGAVRPLVALLSHADPL 120
GTISSLVA KHNPDNRIRIAAAGAVRPLVALLSHADPL
Sbjct: 61 GTISSLVAELESPSSSLDSLRRAAMELRLLAKHNPDNRIRIAAAGAVRPLVALLSHADPL 120
Query: 121 LQEHGVTALLNLSICDENKAIIVEAGAIRPLVHALKSXXXXXXXXXXXXXLLRLSQLDXX 180
LQEHGVTALLNLSICDENKAIIVEAGAIRPLVHALKS LLRLSQLD
Sbjct: 121 LQEHGVTALLNLSICDENKAIIVEAGAIRPLVHALKSAASPAARENAACALLRLSQLDGS 180
Query: 181 XXXXXXXXXXXPLLVSLLETGGARGKKDAATALYALCSGARENRLRAVEAGAVRPLLDLM 240
PLLVSLLETGGARGKKDAATALYALCSGARENRLRAVEAGAVRPLLDLM
Sbjct: 181 AAASIGRAGAIPLLVSLLETGGARGKKDAATALYALCSGARENRLRAVEAGAVRPLLDLM 240
Query: 241 ADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPVLVEMVEVGSPRQKEIATLSLLQIC 300
ADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPVLVEMVEVGSPRQKEIATLSLLQIC
Sbjct: 241 ADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPVLVEMVEVGSPRQKEIATLSLLQIC 300
Query: 301 EDSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSASLRARPTAVVA 360
EDSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSASLRARPTAVVA
Sbjct: 301 EDSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSASLRARPTAVVA 360
Query: 361 AE 362
AE
Sbjct: 361 AE 362
>Os03g0435300 Armadillo-like helical domain containing protein
Length = 358
Score = 359 bits (922), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 210/359 (58%), Positives = 242/359 (67%), Gaps = 16/359 (4%)
Query: 1 MESDASTSPRRRXXXXXXXXXXXXXXXXXXXCGSDDLSFTPAAAAGIHRLL-LSCAAEAS 59
MESDASTSPRR LS + GIHRL L CA +
Sbjct: 1 MESDASTSPRRSDSSDSSTCSDGDDL----------LSSSSPKGTGIHRLPPLPCA---T 47
Query: 60 DGTISSLVAXXXXXXXXXXXXXXXXXXXXXXXKHNPDNRIRIAAAGAVRPLVALLSHADP 119
DG I++LV KH+PDNR+RI AAGA+ PLVALLS DP
Sbjct: 48 DGAIAALVEELESPASSLDDLRRAAMELRLLAKHSPDNRLRIVAAGALPPLVALLSRPDP 107
Query: 120 LLQEHGVTALLNLSICDENKAIIVEAGAIRPLVHALKSXXXXXXXXXXXXXLLRLSQLDX 179
LLQEHGVTALLNLS+ ++N+ +V+AGA+ PLV AL+S LLRL+QLD
Sbjct: 108 LLQEHGVTALLNLSLREDNRGAVVDAGAVGPLVRALRSAASPAARENAACTLLRLAQLDG 167
Query: 180 XXXXXXXXXXXXPLLVSLLETGGARGKKDAATALYALCSGA-RENRLRAVEAGAVRPLLD 238
P+LVSLLE+GGARGKKDAATALYALCSGA EN RAVEAGAVR LL+
Sbjct: 168 SAAAAIGRAGAVPVLVSLLESGGARGKKDAATALYALCSGAPEENGPRAVEAGAVRALLE 227
Query: 239 LMADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPVLVEMVEVGSPRQKEIATLSLLQ 298
LM +PE GMV+KAAYVLH+LVG AEGR+AAV EGG+PVLVEMVE G+PR KE+ATL LL
Sbjct: 228 LMGEPERGMVEKAAYVLHALVGTAEGRAAAVAEGGVPVLVEMVEGGTPRHKEMATLCLLH 287
Query: 299 ICEDSAAYRTMVAREGAIPPLVALSQSSSARPKLKTKAEALIEMLRQPRSAS-LRARPT 356
+CED+AAYRTMVAREGAIPPLVALS SS ARPKL+ KAE L+ +LRQPRS S LRARP+
Sbjct: 288 VCEDNAAYRTMVAREGAIPPLVALSHSSDARPKLRAKAEVLVGLLRQPRSGSLLRARPS 346
>Os07g0584900 Armadillo-like helical domain containing protein
Length = 467
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 129/268 (48%), Positives = 160/268 (59%), Gaps = 7/268 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
KH D R I +GA+ LV LL DP+ QE VTALLNLS+ + N++ I AGAI+PL
Sbjct: 199 KHRSDIRELIGVSGAIPALVPLLRSTDPVAQESAVTALLNLSLEERNRSAITAAGAIKPL 258
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
V+AL++ LL LS ++ PL V+LL G RGKKDA T
Sbjct: 259 VYALRTGTASAKQNAACA-LLSLSGIEENRATIGACGAIPPL-VALLSAGSTRGKKDALT 316
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
LY LCS AR N+ RAV AGAV PL+ L+ + +G +KA VL SL GI EGR A VE
Sbjct: 317 TLYRLCS-ARRNKERAVSAGAVVPLIHLVGERGSGTSEKAMVVLASLAGIVEGRDAVVEA 375
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARPK 331
GGIP LVE +E G R++E A ++LLQ+C + R ++ REGAIPPLVALSQS SAR
Sbjct: 376 GGIPALVETIEDGPAREREFAVVALLQLCSECPRNRALLVREGAIPPLVALSQSGSAR-- 433
Query: 332 LKTKAEALIEMLRQPRS--ASLRARPTA 357
K KAE L+ LR+ R R P A
Sbjct: 434 AKHKAETLLGYLREQRQGGGGCRVEPVA 461
>Os08g0110500 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 824
Score = 195 bits (496), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 123/256 (48%), Positives = 156/256 (60%), Gaps = 6/256 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
KHN +NRI IA GA+ LV LL D QEH VTALLNLSI D NK I A A+ PL
Sbjct: 568 KHNMENRIIIANCGAINLLVGLLHSPDSKTQEHAVTALLNLSINDNNKIAIANADAVDPL 627
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
+H L++ L LS ++ PL V LL G RGKKDAAT
Sbjct: 628 IHVLETGNPEAKENSAAT-LFSLSVIEENKVRIGRSGAIKPL-VDLLGNGTPRGKKDAAT 685
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
AL+ L S EN+ R V+A AV+ L++LM DP GMVDKA VL +L I EGR+A +
Sbjct: 686 ALFNL-SILHENKARIVQADAVKYLVELM-DPAAGMVDKAVAVLANLATIPEGRTAIGQA 743
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARPK 331
GIP LVE+VE+GS R KE A +LLQ+C +S+ + ++V +EGA+PPLVALSQS + P+
Sbjct: 744 RGIPALVEVVELGSARGKENAAAALLQLCTNSSRFCSIVLQEGAVPPLVALSQSGT--PR 801
Query: 332 LKTKAEALIEMLRQPR 347
+ KA+AL+ R R
Sbjct: 802 AREKAQALLSYFRSQR 817
>Os01g0884400 U box domain containing protein
Length = 796
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 117/256 (45%), Positives = 153/256 (59%), Gaps = 6/256 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
+H+ +NRI IA GA+ LV+LL DP QE+ VT LLNLS+ D NK I A AI PL
Sbjct: 540 RHSLENRIAIANCGAIPFLVSLLHSTDPSTQENAVTILLNLSLDDNNKIAIASAEAIEPL 599
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
+ L+ L LS ++ PL V LL G +GKKDAAT
Sbjct: 600 IFVLQ-VGNPEAKANSAATLFSLSVIEENKIKIGRSGAIEPL-VDLLGEGTPQGKKDAAT 657
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
AL+ L S E++ R V+AGAV L++LM DP GMVDKA VL +L + +GR+A +
Sbjct: 658 ALFNL-SIFHEHKTRIVQAGAVNHLVELM-DPAAGMVDKAVAVLANLATVHDGRNAIAQA 715
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARPK 331
GGI VLVE+VE+GS R KE A +LLQ+C +S + T+V +EG +PPLVALSQS +AR
Sbjct: 716 GGIRVLVEVVELGSARSKENAAAALLQLCTNSNRFCTLVLQEGVVPPLVALSQSGTARA- 774
Query: 332 LKTKAEALIEMLRQPR 347
+ KA+ L+ R R
Sbjct: 775 -REKAQVLLSYFRNQR 789
>Os06g0102700 Similar to E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical
U-box domain protein 14)
Length = 611
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 104/264 (39%), Positives = 147/264 (55%), Gaps = 7/264 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K N +NRI IA AGA+ LV LLS +DP QEH VTALLNLSI + NKA IV++ AI +
Sbjct: 352 KRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKI 411
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
V LK+ L LS +D P L++LL G RGKKDAAT
Sbjct: 412 VEVLKT-GSMETRENAAATLFSLSVVDENKVTIGAAGAIPP-LINLLCDGSPRGKKDAAT 469
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
A++ LC + N++RAV+AG V L++ + DP GM+D+A +L L G EG+
Sbjct: 470 AIFNLCI-YQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAGNPEGKIVIARS 528
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPP-LVALSQSSSARP 330
IP LVE+++ GSPR +E A L +C + +T+ A+ + L LS++ + R
Sbjct: 529 EPIPPLVEVIKTGSPRNRENAAAILWLLCS-ADTEQTLAAKAAGVEDALKELSETGTDRA 587
Query: 331 KLKTKAEALIEMLRQPRSASLRAR 354
K KA +++E++ Q SL+
Sbjct: 588 --KRKASSILELMHQANEDSLKGN 609
>Os02g0732200 U box domain containing protein
Length = 637
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/253 (38%), Positives = 137/253 (54%), Gaps = 5/253 (1%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K + DNRI +A +GA+ LV LLS D QEH VTALLNLSI D+NK +IV AGAI P+
Sbjct: 383 KKSTDNRILLAESGAISALVKLLSSKDLKTQEHAVTALLNLSIYDQNKELIVVAGAIVPI 442
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
+ L+ + LS +D LV LL++G RG+KDAAT
Sbjct: 443 IQVLRK-GGMEARENAAAAIFSLSLIDDNKITIGSTPGAIEALVELLQSGSPRGRKDAAT 501
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMAD-PETGMVDKAAYVLHSLVGIAEGRSAAVE 270
AL+ LC + N++RAV AG + PL+ ++ D G +D+A +L LV E + A +
Sbjct: 502 ALFNLCI-YQANKVRAVRAGILAPLIQMLQDSSRNGAIDEALTILSVLVSHHECKIAIAK 560
Query: 271 EGGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARP 330
IP L++++ R KE A LL +C+ A + R GA PL LS++ + R
Sbjct: 561 AHAIPFLIDLLRSSQARNKENAAAILLALCKKDAENLACIGRLGAQIPLTELSKTGTDRA 620
Query: 331 KLKTKAEALIEML 343
K KA +L+E L
Sbjct: 621 --KRKATSLLEHL 631
>Os03g0275900 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 726
Score = 131 bits (329), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 131/244 (53%), Gaps = 5/244 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K +P+NR I AGA+ LV+LLS D QEH VTALLNLSI +ENKA I+ +GA+ +
Sbjct: 417 KRSPENRACIGDAGAIPILVSLLSITDVSTQEHVVTALLNLSIYEENKARIITSGAVPGV 476
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
VH LK L LS +D P LV LL G RGK+DAAT
Sbjct: 477 VHVLKR-GSMEARENSAATLFSLSLVD-ENKITIGASGAIPALVLLLSNGSQRGKRDAAT 534
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
AL+ LC + N+ +AV AG + LL L+ + E+GM+D+A +L L EG++A
Sbjct: 535 ALFNLCI-YQGNKGKAVRAGLIPVLLGLVTETESGMMDEALAILAILSSHPEGKTAISSA 593
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQIC--EDSAAYRTMVAREGAIPPLVALSQSSSAR 329
IP+LV ++ GS R KE A L+ +C E + +G + L L++S + R
Sbjct: 594 NAIPMLVGVIRNGSARNKENAAAVLVHLCNGEQQQQHLAEAQEQGIVTLLEELAKSGTDR 653
Query: 330 PKLK 333
K K
Sbjct: 654 GKRK 657
>Os12g0570000 Similar to Spotted leaf protein 11 (Spotted leaf11) (Cell
death-related protein SPL11)
Length = 637
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/244 (38%), Positives = 132/244 (54%), Gaps = 5/244 (2%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K N +NRI IA AGA+ L++LLS +D QEH VTALLNLSI ++NKA I+ +GA+ +
Sbjct: 339 KRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNKASIISSGAVPSI 398
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
VH LK+ L LS +D P LV LL G RGKKDAA
Sbjct: 399 VHVLKN-GSMEARENAAATLFSLSVID-EYKVTIGGMGAIPALVVLLGEGSQRGKKDAAA 456
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
AL+ LC + N+ RA+ AG V ++ L+ +P ++D+A +L L EG++A
Sbjct: 457 ALFNLCI-YQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAILSILSSHPEGKAAIGAA 515
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQIC--EDSAAYRTMVAREGAIPPLVALSQSSSAR 329
+PVLVEM+ G+PR +E A +L +C E + G + PL L+ + + R
Sbjct: 516 EPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARAQECGIMVPLRELALNGTDR 575
Query: 330 PKLK 333
K K
Sbjct: 576 GKRK 579
>Os06g0726900 Similar to Arm repeat containing protein
Length = 621
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/254 (31%), Positives = 127/254 (50%), Gaps = 5/254 (1%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K NP+NR+ + + L+ LL + D +QE+ VT+LLNLSI + NK +I GAI PL
Sbjct: 371 KENPENRLLVTDNAGIPALIGLLPYPDKKMQENTVTSLLNLSIDEANKLLIARGGAI-PL 429
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
+ + L LS +D P LV LL+ G RGKKDA+T
Sbjct: 430 IIDVLRNGSVEGQENSAAALFSLSMVDENKVAIGTLGGIPP-LVDLLQNGTVRGKKDAST 488
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
A++ L N+LRA+EAG + LL L+ D + MVD+A + L R E
Sbjct: 489 AIFNLMLN-NGNKLRAIEAGILPTLLKLLDDKKAAMVDEALSIFLLLASNPTCRGEVGTE 547
Query: 272 GGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSARPK 331
+ LV++++ G+P+ KE A LL++ + A L ++++ ++R
Sbjct: 548 HFVEKLVQIIKEGTPKNKECAVSVLLELGSSNNALMAHALGFDLHDHLADIAKNGTSRA- 606
Query: 332 LKTKAEALIEMLRQ 345
+ KA +LI++ R+
Sbjct: 607 -QRKANSLIQLARK 619
>Os08g0481200 Similar to Arm repeat containing protein
Length = 642
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 131/257 (50%), Gaps = 11/257 (4%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEAGAIRPL 151
K P+NR IA +G + L+ LL+ D +QE+ VT+LLNLSI + NK I + GA+ PL
Sbjct: 392 KECPENRTLIADSGGIPALIGLLACPDKKVQENTVTSLLNLSIDESNKRHITKGGAL-PL 450
Query: 152 VHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAAT 211
+ + L LS +D P LV LL+ G RGKKDAAT
Sbjct: 451 IIEILRNGSAEAQENSAATLFSLSMIDENKLTIGRLGGIAP-LVELLQNGSIRGKKDAAT 509
Query: 212 ALYALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEE 271
A++ L ++N++RA +AG V LL ++ D MVD+A L + ++ + E
Sbjct: 510 AIFNLVLN-QQNKVRATQAGIVPALLKIIDDKALNMVDEA---LSIFLLLSSNAACCGEI 565
Query: 272 GGIPV---LVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVALSQSSSA 328
G P LV +++ G+P+ KE A LL++ + R G L ++++ ++
Sbjct: 566 GTTPFIEKLVRLIKDGTPKNKECALSVLLELGSKNKPLLVHALRFGLHEDLSKIAKNGTS 625
Query: 329 RPKLKTKAEALIEMLRQ 345
R + KA +LI++ R+
Sbjct: 626 RA--QRKATSLIQLARK 640
>Os02g0488701 U box domain containing protein
Length = 423
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/214 (31%), Positives = 101/214 (47%), Gaps = 8/214 (3%)
Query: 123 EHGVTALLNLSICDENKAII-VEAGAIRPLVHALKSXXXXXXXXXXXXXLLRLSQLDXXX 181
E VT +LNLSI + NK II + AI L+ AL+S + LS LD
Sbjct: 196 EDTVTTILNLSIHESNKKIIGDDTKAITFLISALQSGTMEARSNAAAA-IFSLSALDSNK 254
Query: 182 XXXXXXXXXXPLLVSLLETGGARGKKDAATALYALCSGARENRLRAVEAGAVRPLLDLMA 241
PL V LLE G KKDAA+A+++LC EN+ RA ++G + +L ++
Sbjct: 255 AKIGESGAMRPL-VDLLEHGSMTAKKDAASAIFSLCK-LHENKSRATKSGVIDVVLKAIS 312
Query: 242 DPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGIPVLVEMVEVGS-PRQKEIATLSLLQIC 300
D + D++ +L L E E GG+P ++ +++ R KE A L IC
Sbjct: 313 DE--SLTDESLTILALLSSDHETVEEIGETGGVPCMLHIIKDDQCKRNKENAVAVLFSIC 370
Query: 301 -EDSAAYRTMVAREGAIPPLVALSQSSSARPKLK 333
D R +V E L L+Q+ ++R + K
Sbjct: 371 MYDRTKLREVVEDENLNGSLAWLAQNGTSRARRK 404
>Os02g0234300 U box domain containing protein
Length = 581
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/270 (30%), Positives = 126/270 (46%), Gaps = 23/270 (8%)
Query: 92 KHNPDNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEA-GAIRP 150
K NR IA GA+ L LL D + QE+ VTALLNLSI + NK I+E G +R
Sbjct: 281 KTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRL 340
Query: 151 LVHALKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAA 210
+V L++ L LS + L S+L G +RGKKDA
Sbjct: 341 IVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELASMLTKGTSRGKKDAV 400
Query: 211 TALYALCSGARENRLRAVEAGAVRPLL-----DLMADPETG---MVDKAAYVLHSLVGIA 262
AL+ L S E+ R +E+ AV L+ D +++ G ++ K ++H LVG +
Sbjct: 401 MALFNL-STHPESSARMLESCAVVALIQSLRNDTVSEEAAGALALLMKQPSIVH-LVGSS 458
Query: 263 EGRSAAVEEGGIPVLVEMVEVGSPRQKEIATLSLLQICEDSAAYRTMVAREGAIPPLVAL 322
E I LV ++ G+P+ KE A +L +IC + +V R IP L +
Sbjct: 459 ETV--------ITSLVGLMRRGTPKGKENAVSALYEICRRGGS--ALVQRVAKIPGLNTV 508
Query: 323 SQSSS--ARPKLKTKAEALIEMLRQPRSAS 350
Q+ + + K KA +++M ++ + S
Sbjct: 509 IQTITLNGTKRAKKKASLIVKMCQRSQMPS 538
>Os05g0476700 Similar to Arm repeat protein
Length = 677
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 95/206 (46%), Gaps = 7/206 (3%)
Query: 96 DNRIRIAAAGAVRPLVALLSHADPLLQEHGVTALLNLSICDENKAIIVEA-GAIRPLVHA 154
D R I AGAV LV LL D Q + VTALLNLSI D NK I+ A GA+ + HA
Sbjct: 409 DTRAFIGEAGAVPLLVPLLHSDDTATQLNAVTALLNLSILDANKKRIMHAEGAVEAICHA 468
Query: 155 LKSXXXXXXXXXXXXXLLRLSQLDXXXXXXXXXXXXXPLLVSLLETGGARGKKDAATALY 214
+ S +L L+ + +V L+ TG + KKDA AL
Sbjct: 469 MGSGATWRAKENAAATVLSLASVHSYRRRLGRNPRVVERVVHLVRTGPSSTKKDAIAALL 528
Query: 215 ALCSGARENRLRAVEAGAVRPLLDLMADPETGMVDKAAYVLHSLVGIAEGRSAAVEEGGI 274
L SG REN + VEAGA L +++ ET A VL SL + +G +
Sbjct: 529 CL-SGERENVGKLVEAGAAEAALSAISEEET-----AVAVLASLAKRGGAEAIVNIDGAV 582
Query: 275 PVLVEMVEVGSPRQKEIATLSLLQIC 300
LV + G+ +E A +L+ +C
Sbjct: 583 VRLVAELRRGTEWSRECAAAALVLLC 608
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.130 0.355
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,255,837
Number of extensions: 299493
Number of successful extensions: 1352
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1225
Number of HSP's successfully gapped: 20
Length of query: 362
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 260
Effective length of database: 11,709,973
Effective search space: 3044592980
Effective search space used: 3044592980
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)