BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0671900 Os06g0671900|L33263
(433 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0671900 Similar to Beta-tubulin 849 0.0
Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin) 835 0.0
Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin) 826 0.0
Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin) 815 0.0
Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin) 812 0.0
Os05g0413200 Beta-tubulin 806 0.0
Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta su... 797 0.0
AK109162 755 0.0
AK110204 691 0.0
AK110638 547 e-156
Os07g0574800 Tubulin alpha-1 chain 349 2e-96
AK106047 347 7e-96
Os11g0247300 Alfa-tubulin 346 2e-95
Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubu... 343 1e-94
Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubu... 342 5e-94
AK067478 334 8e-92
AK105538 327 1e-89
Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubu... 265 5e-71
Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin) 264 8e-71
Os06g0169600 76 6e-14
>Os06g0671900 Similar to Beta-tubulin
Length = 433
Score = 849 bits (2194), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/417 (96%), Positives = 403/417 (96%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
Query: 361 LKMASTFIGNSTSIQEMRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 417
LKMASTFIGNSTSIQEMRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA
Sbjct: 361 LKMASTFIGNSTSIQEMRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 417
>Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin)
Length = 447
Score = 835 bits (2156), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 400/430 (93%), Positives = 402/430 (93%), Gaps = 13/430 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
LKMASTFIGNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLVA
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 408 EYQQYQDATA 417
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430
>Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin)
Length = 444
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/429 (91%), Positives = 400/429 (93%), Gaps = 13/429 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEVICDEHG+D TG+Y+GDSDLQLERINVYYNEASGGRYV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
LKMA+TF+GNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLVA
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 408 EYQQYQDAT 416
EYQQYQDAT
Sbjct: 421 EYQQYQDAT 429
>Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin)
Length = 447
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/430 (90%), Positives = 398/430 (92%), Gaps = 13/430 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+CDEHGID TG+Y+G+SDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
L MASTFIGNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 408 EYQQYQDATA 417
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430
>Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin)
Length = 447
Score = 812 bits (2097), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/430 (90%), Positives = 396/430 (92%), Gaps = 13/430 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y G SDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
L MASTFIGNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 408 EYQQYQDATA 417
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430
>Os05g0413200 Beta-tubulin
Length = 444
Score = 806 bits (2083), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/427 (89%), Positives = 394/427 (92%), Gaps = 13/427 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
L MASTF+GNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 408 EYQQYQD 414
EYQQYQD
Sbjct: 421 EYQQYQD 427
>Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)
Length = 446
Score = 797 bits (2058), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/429 (88%), Positives = 390/429 (90%), Gaps = 13/429 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEVIC EHG+D TG Y+G S QLERINVY+NEASGGR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+RSGP G IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL P+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
CAADPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP+G
Sbjct: 301 CAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
L MASTF+GNSTSIQEM RKAFLHWYT EGMDEMEFTEAESNMNDLVA
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 420
Query: 408 EYQQYQDAT 416
EYQQYQDAT
Sbjct: 421 EYQQYQDAT 429
>AK109162
Length = 444
Score = 755 bits (1950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/430 (82%), Positives = 383/430 (89%), Gaps = 13/430 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREI+HIQ GQCGNQIGAKFWEVI DEHGID TG Y GDSDLQLERINVY+NEA+GG+YV
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGKYV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVL+DLEPGTMDSVRSGP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
A DPRHGRYLT +A+FRG+MS KEVDEQMLNVQNKNSSYFVEWIPNNVK++VCDIPP G
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
LKM++TFIGNST+IQE+ RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 408 EYQQYQDATA 417
EYQQYQDATA
Sbjct: 421 EYQQYQDATA 430
>AK110204
Length = 447
Score = 691 bits (1784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 316/429 (73%), Positives = 369/429 (86%), Gaps = 13/429 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREI+H+Q GQCGNQ+GA FW+ I EHG+D +G Y+G SDLQLER+NVY+NEASG +YV
Sbjct: 1 MREIVHLQTGQCGNQVGAAFWQTISGEHGLDSSGVYNGTSDLQLERMNVYFNEASGNKYV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVL+DLEPGTMD+VR+GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D VLDVV
Sbjct: 61 PRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
R+EAE CDCLQGFQ+ H ISKIRE +PDRMM TFSV PSPKVSDTVV
Sbjct: 121 RREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREGFPDRMMATFSVLPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNATLS+HQLVEN+D +DNEALYDIC RTLKL+ P++GDLNHL+SA MSGVT CL
Sbjct: 181 EPYNATLSIHQLVENSDATFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVN++PFPRLHFFM+GFAPLTSRG+ +RA++VPELTQQ++D KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMIGFAPLTSRGAHSFRAVSVPELTQQIFDPKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
AAD R+GRYLT SA++RGK+S KEV++Q+ NVQNKN++YFVEWIPNNV +++CDIPP G
Sbjct: 301 AAADFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVMTALCDIPPRG 360
Query: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
LKM+STF+GNSTSIQE+ RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 408 EYQQYQDAT 416
EYQQYQ+A+
Sbjct: 421 EYQQYQEAS 429
>AK110638
Length = 465
Score = 547 bits (1410), Expect = e-156, Method: Compositional matrix adjust.
Identities = 258/431 (59%), Positives = 326/431 (75%), Gaps = 17/431 (3%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSG-DSDLQLERINVYYNEASG--G 57
MRE++ GQ GNQI + FW+ I +EHG+D G+Y G + D QL ++ V++ E SG G
Sbjct: 1 MRELITFACGQAGNQISSAFWQCILNEHGLDGDGRYIGSNEDEQLAKVGVFF-EPSGQEG 59
Query: 58 RYVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVL 117
+YVPR++ +DLEPGTMD++RSGP G++FRPDN++ G+SGAGNN++KG+YTEGAEL+D VL
Sbjct: 60 KYVPRSIQVDLEPGTMDTIRSGPLGKLFRPDNYINGESGAGNNFSKGYYTEGAELLDQVL 119
Query: 118 DVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSD 177
DV RKEAE D LQGFQ+ H ++K+REE+PDRM+ T+SV PSPKVSD
Sbjct: 120 DVARKEAEKTDMLQGFQLVHSLGGGTGSGLGTNLLTKLREEFPDRMLATWSVLPSPKVSD 179
Query: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVT 237
TVVEPYNATLS HQLVEN+D LDNEALYDIC RTL+ PT+ DLN +IS MSG +
Sbjct: 180 TVVEPYNATLSFHQLVENSDMTFCLDNEALYDICQRTLRTKNPTYSDLNSIISFAMSGCS 239
Query: 238 CCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAK 297
LRFPGQLNSDLRK+ VNL+PFPRLHFF GFAPL + GS+ Y++L EL Q +D K
Sbjct: 240 TTLRFPGQLNSDLRKMGVNLVPFPRLHFFTTGFAPLVAPGSKAYQSLKTSELIAQGYDPK 299
Query: 298 NMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
N+M A DPRHG+YLT +A+FRG ++ ++V+ +M N++ KN + FVEWIPNNV +S+CDI
Sbjct: 300 NIMAAIDPRHGKYLTVAAIFRGNVNARDVENEMYNLREKNPAGFVEWIPNNVLTSLCDIA 359
Query: 358 PIGLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMND 404
P LKM++TFI N+TSIQE+ RKAFLHWYTGEGMDEMEFTEAESN+ D
Sbjct: 360 PPQLKMSATFIANTTSIQELFKRTHDQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNLMD 419
Query: 405 LVAEYQQYQDA 415
L+AEYQQY+ A
Sbjct: 420 LIAEYQQYESA 430
>Os07g0574800 Tubulin alpha-1 chain
Length = 450
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 258/434 (59%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
MREI+ I GQ G Q+G WE+ C EHGI+ G D+ + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRA+ +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
VRK A+NC LQGF V + + ++ +Y + L F+++PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + L+VPE+T +++ +
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 359 --------IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
++ A I N+T++ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>AK106047
Length = 451
Score = 347 bits (891), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 166/434 (38%), Positives = 251/434 (57%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLE--RINVYYNEASGGR 58
MRE+L I GQ G Q+G WE+ C EHGI G D + +E N +++E G+
Sbjct: 1 MREVLSIHIGQAGVQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGK 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF + H + ++ +Y + L ++V+PSP+VS
Sbjct: 121 RIRKLADNCTGLQGFCIYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D +LDNEA+YD+C R L + PT+ +LN L+ +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAAMLDNEAMYDLCRRNLDIERPTYTNLNRLVGQVVSSLTA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN D+ + NL+P+PR+HF + FAP+ S + L+V E+T ++ +
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFVLTSFAPVISAEKAYHEQLSVAEITNAAFEPAS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
M+ DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MLTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 359 I--------GLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
++ A I NST+I E+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>Os11g0247300 Alfa-tubulin
Length = 451
Score = 346 bits (888), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 168/434 (38%), Positives = 255/434 (58%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ GD + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V + + ++ +Y + L F+V+PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 359 --------IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
++ A I NSTS+ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 343 bits (881), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 167/434 (38%), Positives = 254/434 (58%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQL--ERINVYYNEASGGR 58
MRE + I GQ G Q+G WE+ C EHGI G+ D + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V + + ++ +Y + L F+V+PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN L+S +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 359 --------IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
++ A I NSTS+ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 449
Score = 342 bits (876), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 257/434 (59%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLER--INVYYNEASGGR 58
MREI+ I GQ G Q+G WE+ C EHGI G D+ + R N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRA+ +DLEP +D V++GPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V + + ++ +Y + L F+++PSP++S
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
Query: 359 IG--------LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
++ A I N+T++ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>AK067478
Length = 453
Score = 334 bits (856), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 162/434 (37%), Positives = 248/434 (57%), Gaps = 23/434 (5%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDL--QLERINVYYNEASGGR 58
MRE + I GQ G Q+G WE+ C EH I G D+ L + N +++E GR
Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHNITPDGTMPSDTTLGSSDDSFNTFFSETGAGR 60
Query: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPRAV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD
Sbjct: 61 HVPRAVYVDLEPTVVDEVRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+R+ ++ C LQGF + H + ++ +Y + L F+++P+P+VS
Sbjct: 121 RIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN DL + NL+P+PR+HF +V +AP+ S + LTV E+T ++ N
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVSEITNSCFEPSN 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
M DPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K + PP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 359 I--------GLKMASTFIGNSTSIQE-------------MRKAFLHWYTGEGMDEMEFTE 397
++ A + N+T+I E ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 398 AESNMNDLVAEYQQ 411
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>AK105538
Length = 449
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 161/432 (37%), Positives = 246/432 (56%), Gaps = 21/432 (4%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MRE++ I GQ G Q+G W++ C EHGI G D E +++E G+YV
Sbjct: 1 MREVISIHVGQAGVQMGQSCWQLYCLEHGIQPDGTMPSDKQPGDESFTTFFSETGTGQYV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PR+V++DLEP +D +R+G Y Q+F P + G+ A NN+A+GHYT G E +D+V+D +
Sbjct: 61 PRSVMVDLEPTVVDEIRTGTYRQLFHPAGLISGKEDAANNYARGHYTVGKENVDTVVDRL 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
K AEN LQGF + + ++ +Y +M L F+V+P+P+V+ VV
Sbjct: 121 GKIAENSSGLQGFLFFNSIGGGTGSGFTSLLMERLSVDYGKKMKLQFAVYPAPEVATAVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
EPYNA L+ H +E++D ++DNEA+Y +C + L + P++ +LN L+S +S +T L
Sbjct: 181 EPYNAVLTSHTTMEHSDCAFMVDNEAIYALCQKKLDVPRPSYLNLNRLVSQAVSSITASL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RF G LN DL + NL+P+PR+HF +V +AP+ S + LTV ELT ++A N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLVTYAPIISAEKAHHENLTVGELTNSCFEATNQM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPI- 359
DPR G+Y+ +FRG + K+V+ + ++NK S FV+W P K + PP
Sbjct: 301 VKCDPRMGKYMACCLLFRGDVVPKDVNNAIAVIKNKRSIQFVDWCPTGFKVGINYQPPTV 360
Query: 360 -------GLKMASTFIGNSTSIQE-------------MRKAFLHWYTGEGMDEMEFTEAE 399
+ A + N+T+I E ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPNGDLAKVNRAVCMLSNTTAIAEAWARVNHKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 400 SNMNDLVAEYQQ 411
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)
Length = 469
Score = 265 bits (677), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 146/438 (33%), Positives = 239/438 (54%), Gaps = 30/438 (6%)
Query: 2 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVP 61
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
RA+L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
Query: 120 VRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDT 178
+ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
VV+PYN+ L++ +L NAD +VLDN AL I L LA PTF N L+S MS T
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
Query: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
Query: 353 VCDIPP---IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTG----EGMDE 392
+ P +++ + N TSI+ + ++AFL Y E D
Sbjct: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
Query: 393 MEFTEAESNMNDLVAEYQ 410
EF E+ + LV EY+
Sbjct: 422 SEFDESREIIESLVDEYK 439
>Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin)
Length = 133
Score = 264 bits (675), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 122/132 (92%), Positives = 127/132 (96%)
Query: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
MREILHIQGGQCGNQIGAKFWEV+C EHGID TG+Y GDSDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRSGPYG IFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 121 RKEAENCDCLQG 132
RKEAENCDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>Os06g0169600
Length = 107
Score = 75.9 bits (185), Expect = 6e-14, Method: Composition-based stats.
Identities = 49/97 (50%), Positives = 53/97 (54%), Gaps = 24/97 (24%)
Query: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT---LSVHQL-VENADECMVLDNEAL 207
ISKIREEYPDRMMLTFS SP + Y LS+ L +ENA ECMV+
Sbjct: 28 ISKIREEYPDRMMLTFSEKFSPH--QRFLIHYGGAAHYLSISLLRLENAIECMVI----- 80
Query: 208 YDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPG 244
GDLNHLISATMSGVTCC FP
Sbjct: 81 -------------MIGDLNHLISATMSGVTCCQLFPA 104
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,906,224
Number of extensions: 554088
Number of successful extensions: 1071
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 1044
Number of HSP's successfully gapped: 20
Length of query: 433
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 329
Effective length of database: 11,605,545
Effective search space: 3818224305
Effective search space used: 3818224305
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)