BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0148600 Os06g0148600|AK063946
(393 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0148600 Protein of unknown function DUF295 family protein 776 0.0
Os06g0148700 Cyclin-like F-box domain containing protein 255 3e-68
Os06g0148300 Conserved hypothetical protein 166 2e-41
Os06g0148800 Protein of unknown function DUF295 family protein 152 6e-37
Os06g0148900 Protein of unknown function DUF295 family protein 113 3e-25
Os02g0159800 Cyclin-like F-box domain containing protein 105 7e-23
Os12g0585200 Protein of unknown function DUF295 family protein 103 2e-22
Os08g0410266 Cyclin-like F-box domain containing protein 102 4e-22
Os07g0499900 Cyclin-like F-box domain containing protein 100 1e-21
Os07g0140900 99 4e-21
Os12g0594400 96 4e-20
Os12g0592500 Cyclin-like F-box domain containing protein 91 1e-18
Os02g0129200 87 3e-17
Os06g0148500 Cyclin-like F-box domain containing protein 82 7e-16
Os11g0154100 80 2e-15
Os11g0594900 77 3e-14
Os11g0594600 Protein of unknown function DUF295 family protein 74 3e-13
Os04g0329500 Protein of unknown function DUF295 family protein 73 4e-13
Os04g0317300 Protein of unknown function DUF295 family protein 73 4e-13
Os11g0154200 71 2e-12
Os04g0316800 Protein of unknown function DUF295 family protein 68 1e-11
Os06g0707300 Protein of unknown function DUF295 family protein 66 4e-11
Os08g0336000 66 4e-11
>Os06g0148600 Protein of unknown function DUF295 family protein
Length = 393
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/393 (95%), Positives = 375/393 (95%)
Query: 1 MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLL 60
MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLL
Sbjct: 1 MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLL 60
Query: 61 DGTFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPKLARIW 120
DGTFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPKLARIW
Sbjct: 61 DGTFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPKLARIW 120
Query: 121 HHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVCIVHRSISTDSFRFH 180
HHERGNAYNACTRLFYK MNDPLRHSVVCIVHRSISTDSFRFH
Sbjct: 121 HHERGNAYNACTRLFYKLAVPLPLDLSSDSLVAVLMNDPLRHSVVCIVHRSISTDSFRFH 180
Query: 181 DRPIKNNFYDIAFCGGKLYALSCGKLFTVEMSEVHIEKPKVPHVECIVEDFPTESHSQPC 240
DRPIKNNFYDIAFCGGKLYALSCGKLFTVEMSEVHIEKPKVPHVECIVEDFPTESHSQPC
Sbjct: 181 DRPIKNNFYDIAFCGGKLYALSCGKLFTVEMSEVHIEKPKVPHVECIVEDFPTESHSQPC 240
Query: 241 PENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRM 300
PENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRM
Sbjct: 241 PENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRM 300
Query: 301 WRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRS 360
WRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRS
Sbjct: 301 WRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRS 360
Query: 361 GVITPLLQENTAPRLHPTGEGHPTWFFPADGAM 393
GVITPLLQENTAPRLHPTGEGHPTWFFPADGAM
Sbjct: 361 GVITPLLQENTAPRLHPTGEGHPTWFFPADGAM 393
>Os06g0148700 Cyclin-like F-box domain containing protein
Length = 291
Score = 255 bits (652), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 167/320 (52%), Positives = 194/320 (60%), Gaps = 30/320 (9%)
Query: 1 MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLL 60
MMAA QSSSWADLQ ++LGLVL RLPSLADRVRLRAVCRPWRSNA+L LPPP PWL LL
Sbjct: 1 MMAAVQSSSWADLQPELLGLVLTRLPSLADRVRLRAVCRPWRSNARLQPLPPPLPWLTLL 60
Query: 61 DGTFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPKLARIW 120
+GTFLSISDGEIH MPLPDDASC+ SIDNWLFL+ D G SLMN FSKATLQLPKL IW
Sbjct: 61 NGTFLSISDGEIHCMPLPDDASCHCSIDNWLFLSHDDGGFSLMNLFSKATLQLPKLDTIW 120
Query: 121 HHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVCIVHRSISTDSFRFH 180
H A LFYK + + +CI ++T+SFR
Sbjct: 121 CHHLWYAAPKFP-LFYKLAVPSPLDFSPTSLVVALIMNRSHQKALCICQPPVATESFRVE 179
Query: 181 DRPIKNNFYDIAFCGGKLYALS-CGKLFTVEMSEVHIEKPKVPHVECIVEDFPTESHSQP 239
++ D F GKLY L+ KLF +E+ E HI+
Sbjct: 180 GSTMEG-MQDFTFLDGKLYVLNNFNKLFILEIDESHID---------------------- 216
Query: 240 CPENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSR 299
++ + YLV SGG LL V R VG+ P + + FK S T SF+V+EADL TGSR
Sbjct: 217 ----YLIMRRYYLVESGGGLLMVTRYVGIVLPLAEPNS-FKHSRTLSFKVFEADLTTGSR 271
Query: 300 MWRRVESLGDQALFVGRHYS 319
MWRRV SLG +ALFVG H S
Sbjct: 272 MWRRVTSLGGRALFVGTHCS 291
>Os06g0148300 Conserved hypothetical protein
Length = 168
Score = 166 bits (421), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/154 (56%), Positives = 98/154 (63%), Gaps = 8/154 (5%)
Query: 52 PPFPWLNLLDGTFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATL 111
PP PWL LL GTFLSISDG+IHRMPLP+DASC+GSIDNWLFL DS+ GCSLMN FSK TL
Sbjct: 12 PPLPWLTLLHGTFLSISDGKIHRMPLPNDASCHGSIDNWLFLRDSNGGCSLMNLFSKVTL 71
Query: 112 QLPKLARIWHHERGNAY--------NACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHS 163
LPKLA IWH + AY N T L YK +NDPL S
Sbjct: 72 HLPKLASIWHDKMERAYRGSGILLCNEYTLLSYKFAVPLPLDSSPVPLVAVLINDPLHVS 131
Query: 164 VVCIVHRSISTDSFRFHDRPIKNNFYDIAFCGGK 197
CI ++ I+TDSF HD ++N YDIAFCGG
Sbjct: 132 AACICYQPIATDSFISHDFSLENKTYDIAFCGGS 165
>Os06g0148800 Protein of unknown function DUF295 family protein
Length = 387
Score = 152 bits (383), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 152/392 (38%), Positives = 199/392 (50%), Gaps = 39/392 (9%)
Query: 2 MAATQ---SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQL--LTLPPPFPW 56
MAA + SW DL ++LGLVL RLPS DRVRLRAVCRPWRS+A+L LPPP PW
Sbjct: 1 MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKLLPPPLPW 60
Query: 57 LNLLDGTFLSISDGEIH-RMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPK 115
L L DG FL++ DG H R+ +P D + + L L +D SLMNP S AT LP
Sbjct: 61 LFLPDGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD 120
Query: 116 LARIWHHERGNAY-NACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVCIVHRSIST 174
LA ++H E Y + +L + N S V I S
Sbjct: 121 LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNS----SKVIIT--SGQP 174
Query: 175 DSFRFHDRPIKNNFYDIAFCGGKLYALSCGKLFTVE-------MSEVHIEKPKVPHVECI 227
+ P + DIA GKLY L+ F +E + EV E+P V V+CI
Sbjct: 175 HTVVKWSPPDSSYILDIALFQGKLYCLT----FDIENCQEELYILEVRDEEPMVSDVKCI 230
Query: 228 ---VEDFPTESHSQPCPENHICVTW-PYLVASGGRLLNVIRLVGVPFPP--EDDDDIFKD 281
D E + P + T+ YLVA G RLL V R + + PP D I +
Sbjct: 231 HSTPRDVGDEDEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKR- 289
Query: 282 SLTFSFEVYEA-DLNTGSRMWRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCD 340
T F+V+EA DL++ W +V++L +LFV S+SL+A GA+EDCIYFM D
Sbjct: 290 --TRRFDVFEAVDLSSEHGRWIKVDTLMGHSLFVSESCSESLTA----GAEEDCIYFMND 343
Query: 341 DYF-RSDEDPLCDAGIYNMRSGVITPLLQENT 371
R +DPL D+G+YNMR G++ PL+ E
Sbjct: 344 GIMNRIPKDPLSDSGVYNMRDGMVAPLMPETA 375
>Os06g0148900 Protein of unknown function DUF295 family protein
Length = 368
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 111/213 (52%), Gaps = 15/213 (7%)
Query: 186 NNFYDIAFCGGKLYALSCG-KLFTVEMSEVHIEKPKVPHVECI---VEDFPTESHSQPCP 241
++ DIA GKLY L+ + E+ ++ K + CI ++D ES PC
Sbjct: 162 SSIVDIASFQGKLYYLTSDVRKRQEELYIFGVDNAKQIGIRCISSTLKDIGEESWFGPCS 221
Query: 242 ENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEA-DLNTGSRM 300
T YLVAS RLL V R + +P D I K T FEV+EA DL++G
Sbjct: 222 TERY-ATERYLVASNDRLLMVRRWINLPPIYPSDSGIVKR--TRRFEVFEAADLSSGCGR 278
Query: 301 WRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCDDYFRSD-EDPLCDAGIYNMR 359
W +V++L ALFV + SKSLSA GA+EDCIYFM +D EDP D+G+YNMR
Sbjct: 279 WIKVDTLMGHALFVSKGCSKSLSA----GAEEDCIYFMHEDIKNGKPEDPFLDSGVYNMR 334
Query: 360 SGVITPLLQEN--TAPRLHPTGEGHPTWFFPAD 390
G + PLL E P G PTW FP++
Sbjct: 335 DGTVAPLLTETLVAEPLAVHGGPWCPTWLFPSE 367
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 3/101 (2%)
Query: 10 WADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQL--LTLPPPFPWLNLLDGTFLSI 67
W DL ++LGLVL RLPS ADRVRLRAVCRPWRS+A++ LPPP PWL L G F+++
Sbjct: 44 WPDLPSELLGLVLLRLPSHADRVRLRAVCRPWRSSARVELDLLPPPLPWLLLRGGAFITL 103
Query: 68 SDGEIHRMP-LPDDASCYGSIDNWLFLTDSDDGCSLMNPFS 107
DG HR+P +P DA+ S + L + D SLMNP S
Sbjct: 104 PDGAAHRLPAVPGDATHLASTGSGLLIVHGDGMLSLMNPSS 144
>Os02g0159800 Cyclin-like F-box domain containing protein
Length = 415
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 120/419 (28%), Positives = 164/419 (39%), Gaps = 54/419 (12%)
Query: 7 SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPF-PWLNLLDGTFL 65
+SSW DL +DI G VLRRLPS ADR+ A CR WR++A+ PPP P L DG+F
Sbjct: 19 ASSWRDLPLDIAGEVLRRLPSYADRICFGATCRSWRTSAREHRAPPPLSPCLCFADGSFR 78
Query: 66 SISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCSLM-NPFSKATLQ--LPKLARIWHH 122
+ LP A GS WL DDG L+ +PFSKA LP ++R+ H
Sbjct: 79 GFFPEDARPFRLPAAAGWLGSCGEWLLYRRHDDGAYLLVDPFSKAAAMAPLPSVSRL--H 136
Query: 123 ERGNAYNA--------CTRLFYKXXXXXXXXXXXXXXXXXXMNDPL---------RHSVV 165
R + A C + RH +
Sbjct: 137 VRHDPIVAVDERDLRWCRPTWLPRENTGEPQAAASLLKLAVSPAADVVAAVVGEGRHGKL 196
Query: 166 CIVHRSISTDSFRFHD--RPIKNNFYDIAFCGGKLYALSCGKLFTVEMSEVHIEKPKVPH 223
+ S D R IK+ AF GKLYA+ + E P V
Sbjct: 197 AVCRPGAPAWSVSGGDGWRRIKDT----AFYQGKLYAVDHNEDLLAVTLAADGEPPAVSR 252
Query: 224 VECIVEDFPTESHSQPCPENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSL 283
++ ++ P P + VT YLV SGG LL V R V L
Sbjct: 253 IDRVINGKP------PGAAALLRVTLHYLVDSGGELLLVRREVQRSSMVRTQPWQHTAEL 306
Query: 284 TFSFEVYEADLNTGSRMWRRVESLGDQ----ALFVGRHYSKSLSAAEYVGAQEDCIYFMC 339
F V+ AD WRRV+++GD+ ALFVGR S+++ A A D ++F+
Sbjct: 307 QDRFAVFRADFRRSR--WRRVKTIGDESGGRALFVGRWCSRAVRVAGDRWA--DQVFFLE 362
Query: 340 DD-----YFRSDEDPLCDAGIYNMRSGVITPLLQENTAPRLHPTGEGHPTWFFPADGAM 393
D + R+ L + +R + PL+ L TW FP + +
Sbjct: 363 DGTGDEWHTRAQRCSLRGSTFGCVRPNELLPLMTTADGQDL------DATWIFPREAKL 415
>Os12g0585200 Protein of unknown function DUF295 family protein
Length = 418
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/215 (34%), Positives = 106/215 (49%), Gaps = 19/215 (8%)
Query: 188 FYDIAFCGGKLYALSCGK-LFTVEMSEVHIEKP-KVPHVECIVEDFPTESHSQPCPENHI 245
F DIAF GG LY L+ + L +++ ++ P H CI +D + +
Sbjct: 210 FSDIAFLGGNLYTLTNAEGLLVLDLGSNGVDDPPNASHRRCIADDPNQHEYYIDGSTKNK 269
Query: 246 CVTWPYLVASGGRLLNVIRLVGV--PFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRR 303
+ YLV S GRLL V R + + D D T FEV+ A ++ G W +
Sbjct: 270 SLVLRYLVGSNGRLLMVRRWMNCRQQYYAGDMDK------TRGFEVFAAVISDGHGQWVK 323
Query: 304 VESLGDQALFVGRHYSKSLSAAEYV-GAQEDCIYFMCDDYFRSDE-------DPLCDAGI 355
V+SLGDQA+F+ SKS++A++ G Q+DCIYFM Y + DPL D+G+
Sbjct: 324 VDSLGDQAIFLSSECSKSVTASQCADGIQQDCIYFMHRIYDNPTKECHGPCVDPLGDSGV 383
Query: 356 YNMRSGVITPLLQENTAPRLHPTGEGHPTWFFPAD 390
YNMR G I L L + + TWFFP+D
Sbjct: 384 YNMRDGTINLLRPRAVMSELRWKRQ-YLTWFFPSD 417
>Os08g0410266 Cyclin-like F-box domain containing protein
Length = 638
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 119/401 (29%), Positives = 176/401 (43%), Gaps = 65/401 (16%)
Query: 6 QSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTFL 65
Q SWAD+ D+ VLR LP+ DR AVC WR A+ LP P P L L DG F
Sbjct: 16 QPPSWADIPRDLAVQVLRFLPAQVDRACFAAVCPQWRGAARNALLPAPLPLLALPDGAFY 75
Query: 66 SISDGEIHRMPLPDDASCYG----SIDNWLFLTDSDDGCSLMNPFSKATLQLPKLARI-- 119
+ G+ R P A C G + WL DDGC L++PF+ AT+ LP L+R+
Sbjct: 76 CLPYGKPFRFP---RAGCAGYKTAACGRWLVFPH-DDGCFLVDPFAGATVTLPALSRVRL 131
Query: 120 --------WHHERGNAYNACTRLFYKXXXXXXXXXX---------------XXXXXXXXM 156
+ + NA +FY +
Sbjct: 132 RPPNAVASYVNVGIAGRNAHVSMFYPHATWMHIKTSDKMPINKLLLCSQNLVAAFIGSSL 191
Query: 157 NDPLRHSVVCIVHRSISTDSFRFHDRPIKNNFYDIAFCGGKLYALSCGK-LFTVEMSE-V 214
+ R+S + + S+ S R +D+ F D+AF GKLYAL+ + L V +S+
Sbjct: 192 ANAGRNSQILVCQPGASSWSVRAYDK--CKLFEDMAFYRGKLYALAHDENLLVVNISQDP 249
Query: 215 HIEKPKVPHVECIVEDFPTESH---SQPCPENHICVTWPYLVASGGRLLNV-----IRLV 266
+ P++ + +++ PT S + + YLV S G LL V R+V
Sbjct: 250 NTGDPQISQIGQVIKGDPTWSSVLITDDDDTSTTDKKKLYLVESCGVLLMVRRKVCCRVV 309
Query: 267 GVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRRVESLG-DQALFVGRHYSKSLSAA 325
G P ++ FEV++ADL W V +LG DQ +F+GR SK++SA+
Sbjct: 310 GKTVVPGQNE----------FEVFKADLENSR--WVNVTTLGVDQMVFLGRPCSKAVSAS 357
Query: 326 EYVGAQEDCIYFMCDDYFRSD-----EDPLCDAGIYNMRSG 361
+Y G D I+F+ DD ++ E+ +Y+MRS
Sbjct: 358 QY-GMPNDQIFFL-DDVMENNKEYSYEEETTSVNVYDMRSA 396
>Os07g0499900 Cyclin-like F-box domain containing protein
Length = 454
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 30/248 (12%)
Query: 1 MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQL-LTLPPPFPWLNL 59
M + + W+DL D+LGLV+ RLP ADR R RAVCR W S + + PP PW+ L
Sbjct: 1 MAGTSTMAPWSDLPSDLLGLVIARLPFPADRARFRAVCRAWHSALRRHVAAPPQLPWIVL 60
Query: 60 LDGTFLSISDGEIHRMPLPD-DASCYGSIDNWLFL----------------TDSDDGCSL 102
+GTF+++SDG +HRM P+ + C GS D WL L T + L
Sbjct: 61 PEGTFVTVSDGGVHRMAFPESNTVCIGSTDGWLALHRTDNDDDDSVDGARTTKTRHTFLL 120
Query: 103 MNPFSKATLQLPKLARIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRH 162
NPF+ AT+ L +L I + + C + + PL
Sbjct: 121 HNPFTGATVPLAELGDILDDDFFEEFRVCKVIIRS---HPNGGGHLVAVMTNHWDCPL-- 175
Query: 163 SVVCIVHRSIST-DSFRFHDRPIKNNFYDIAFCGGKLYALSCGK-LFTVEMSEVHIEKPK 220
++C + I T DS P DIAF KLY ++ + LF V++++ KP
Sbjct: 176 -ILCQPGKGIWTPDSCTM---PFV-RVVDIAFFADKLYLITKAEDLFAVDLADDKDGKPT 230
Query: 221 VPHVECIV 228
V VE I+
Sbjct: 231 VTSVERII 238
>Os07g0140900
Length = 258
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 108/231 (46%), Gaps = 40/231 (17%)
Query: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNA-QLLTLPPPFPWLNLLDG--TF 64
S W DLQ ++ G+V RL S DR+R RAVCR WR A Q LPP PWLN LDG T+
Sbjct: 29 SPWPDLQPELAGMVFCRLLSHGDRLRFRAVCRRWRLAAWQQHPLPPALPWLN-LDGRITY 87
Query: 65 LSISDGEIHRMPLPDD------ASCYGSIDNWLFLTDSDD-GCSLMNPFSKATLQLPKLA 117
S+ DGE+HR+P+PD+ C GS D WL S+ C LMNP SKA + LP
Sbjct: 88 QSLPDGEVHRIPVPDELQAGGTVVCRGSFDGWLLYDRSEQLECFLMNPISKARIDLPYH- 146
Query: 118 RIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVC---IVHRSIST 174
WH C N +R VC +V I+
Sbjct: 147 --WH---------CDDDDDAILPDYGEEKEGQRTMCFGEN-AVRKIAVCSPDLVAAVIAG 194
Query: 175 DSFRFHDRPIKNNFY-----------DIAFCGGKLYALSC-GKLFTVEMSE 213
F+ RP ++ + DIA+ GKLY++S G+LF E S+
Sbjct: 195 SGVFFY-RPGMHSTWLFASGGPCFARDIAYYNGKLYSISSDGELFVHEFSD 244
>Os12g0594400
Length = 368
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 113/378 (29%), Positives = 158/378 (41%), Gaps = 54/378 (14%)
Query: 54 FPWLNLLDGTFLSISDGEIHRMPLP---DDASCYGSID--NWLFLTDSDDGCSLMNPFSK 108
PWL L DG + + DG R P P D + + N +FL D GCSLMNP S
Sbjct: 1 MPWLALRDGGLIDL-DGNPVRCPRPILRDGVVSFHPVGGGNLVFLEHDDGGCSLMNPLSA 59
Query: 109 AT-------LQLPKLARIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLR 161
A+ L LP+LA + + + P
Sbjct: 60 ASGDRDDPLLPLPELAAAVRRAVDSCETPTVATYTPKPSYSTVIMSSSPVVADSSSSPPD 119
Query: 162 HSVVCIVHR----SIST--------DSFRFHDRPIK--------NNFYDIAFCGGKLYAL 201
V ++ +IST SF F D + IAF GKLYA+
Sbjct: 120 TLVAALILNRCAVAISTCKRHDGAAASFSFMDERSRIRSVWLRATAICAIAFLHGKLYAV 179
Query: 202 SCGK-LFTVEMSEVHIEKPKVPHVECIVEDFPTES-HSQPCPENHICVTWPYLVASGGRL 259
+ + L +++ + CI +D +S H H+ V Y+V SGGRL
Sbjct: 180 TSKEGLHVLDLDNGGGGEGGAVLRPCIADDPEKKSVHVDVERRGHLVVR--YVVESGGRL 237
Query: 260 LNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRRVESLGDQALFVGRHYS 319
L V +P P D F+V EA G W+ V+SL +ALF+G+ S
Sbjct: 238 LMVRWWKSLPPPVWS-----ADRPPSRFDVLEAADGLGR--WKAVDSLRGRALFLGKADS 290
Query: 320 KSL---SAAEYVGAQEDCIYFMCDDY-FRSDEDPLCDAGIYNMRSGVITP--LLQENTAP 373
+S+ GA+EDCIYFM + + S E+ +G+Y+MRSG I+P L + TA
Sbjct: 291 RSVVAGGGGGGAGAREDCIYFMRRSFWYPSKEEDFGQSGVYDMRSGEISPPQLPERGTAE 350
Query: 374 -RLHPTGEGHPTWFFPAD 390
RLH +P WF+PAD
Sbjct: 351 LRLHCE---YPRWFYPAD 365
>Os12g0592500 Cyclin-like F-box domain containing protein
Length = 200
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 5/116 (4%)
Query: 7 SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQ-LLTLPPPFPWLNLLDGTFL 65
+SSW++L D++G VL RLPSLADRVRLRA CRPWR++A+ LPPP PW L DG +
Sbjct: 17 TSSWSELPADLIGQVLLRLPSLADRVRLRAACRPWRTDAKRQAALPPPLPWFALRDGGLV 76
Query: 66 SISDGEIHRMP--LPDDASCYGSIDNWLFLTDSDDG-CSLMNPFSKA-TLQLPKLA 117
+ R L + + Y ++DN FL + CSL+NP S + LP+LA
Sbjct: 77 DHHGAPVRRCAPILREGVTDYLAVDNLAFLAHNRAACCSLVNPLSASEETPLPQLA 132
>Os02g0129200
Length = 407
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 134/358 (37%), Gaps = 52/358 (14%)
Query: 7 SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLL---TLPPPFPWL-NLLDG 62
S SW+DL ++I G +L R+PS ADR R + CR WR A L LPPP PWL + G
Sbjct: 24 SRSWSDLPVEIAGEILGRVPSFADRARFSSACRQWRLAAAELHGGALPPPLPWLVSCYKG 83
Query: 63 TFLSISDGEIHRMPLPDDASCYGSIDNWLFLTDSDDGCS----------LMNPFSKATLQ 112
F S+ G+ H + L D +C WL L P SKA ++
Sbjct: 84 AFDSLPYGDRHYLAL-DSPACLACDGGWLLFDRRAAAAVAGGGGGGGYLLKKPISKAAME 142
Query: 113 LPKLARIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVCIVHRSI 172
LP + A T R +C R
Sbjct: 143 LPGSL--------SGPPAATAEMKICKLVVMSRDLVAAIVSTSGGGGGRAVALC---RPG 191
Query: 173 STDSFRFHDRPIK-----NNFYDIAFCGGKLYAL-SCGKLFTVEMSEVHIEKPKVPHVEC 226
++ S+ H P + DIA GGKLYAL G L + ++ I P V
Sbjct: 192 TSPSWSAHHPPGGADHQLGDLRDIAVHGGKLYALHGHGNLCSYDL----IAGDGEPKVSS 247
Query: 227 IVEDFPTES-HSQPCPENHICVTWPYLVASGGRLLNVIRLVGVPFPPEDDDDIFKDSLTF 285
V ++ PE H A+GG LL V L + L
Sbjct: 248 CVHHIAGDALPPNKLPEEHDAGHHLVPSATGGELLLVRHL-------------YSRFLGR 294
Query: 286 SFEVYEADLNTGSRMWRRVESLGDQALFVGRHYSKSLSAAEY--VGAQEDCIYFMCDD 341
F V+ AD+ SL DQ +FVG S++L+A+ Y VGA F +D
Sbjct: 295 HFTVFVADVGGARWSEAAASSLRDQLIFVGTGCSRALTASHYGGVGAMRGNRVFYTND 352
>Os06g0148500 Cyclin-like F-box domain containing protein
Length = 81
Score = 82.0 bits (201), Expect = 7e-16, Method: Composition-based stats.
Identities = 36/47 (76%), Positives = 42/47 (89%)
Query: 1 MMAATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQL 47
M++ QSSSWAD Q ++LGLVLRRLPS ADRVRLRAVCRPWRSNA++
Sbjct: 1 MVSKQQSSSWADFQPELLGLVLRRLPSHADRVRLRAVCRPWRSNAEM 47
>Os11g0154100
Length = 458
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 174/447 (38%), Gaps = 77/447 (17%)
Query: 7 SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLD-GTFL 65
SS W DL ++ G+V RL S DR+R +AVCR WR A PP LD T+
Sbjct: 25 SSPWPDLLPELAGMVFCRLLSYRDRLRFQAVCRSWRLAAPRQHPLPPPLPWLSLDRATYQ 84
Query: 66 SISDGEIHRM-PLPDD-----ASCYGSIDNWLFL----------TDSDDGCSLMNPFSKA 109
S+ DGE+HR+ P PDD C GS D WL C L NP S A
Sbjct: 85 SLPDGEVHRLVPDPDDDELPGTVCRGSFDGWLLYHRPPEQPPPQPQRQPECFLRNPLSMA 144
Query: 110 TLQLPKLARIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMND----------P 159
+ LP A + G Y+A F K M D P
Sbjct: 145 KIALPNHAPVGLCP-GGCYDAMC--FPKPEEFMRKIIVRSPDHVAAMTDYFILLHLPPKP 201
Query: 160 LRHSVVCIVHRSISTDS---FRFHDRPIKNNFYDIAFCGGKLYALSCG-KLFTVEMSEVH 215
+ +IS D F H + + D+A GKLY++S G +LF E S
Sbjct: 202 PQLPYWSFTAATISIDDGGLFTSH-----HCWRDMALYHGKLYSISTGEELFVHEFSSSE 256
Query: 216 I-------------EKPKVPHVECIVEDFPTESHSQPCPENHICVTWPYLVAS--GGRLL 260
+P+ E +++ P + + V +LV S G + L
Sbjct: 257 AVSSPSSSTTTATQHRPRYCRGEVVIDTAPPLDDEE---HGYYWVRNLHLVESCTGDKPL 313
Query: 261 NVIRLVGVPFPPEDDDDIFKDSLT--FSFEVYEADLNTGSRMWRRVESLGDQALFVGRHY 318
++R D D L+ +V+EAD+ +R W VE +GDQA+F+G
Sbjct: 314 LMVRWRWRLPAVYDYRHWCADELSKEIKLDVFEADME--NRRWSEVEEIGDQAIFLGNTN 371
Query: 319 SKSLSAAEYVGAQEDCIYFMCDDYFRS---DEDPLCDAGIYNMRSGVI---TPLLQENTA 372
SK++ G+ + + DY D C G+YNM++G P+ +
Sbjct: 372 SKAVPTLPDHGSSIFFLGSIVTDYCLDGIIDGIGDCAYGVYNMKNGTFRFDNPVSIKRDR 431
Query: 373 PRLHPTGEGHP----------TWFFPA 389
L +G+P WFFP+
Sbjct: 432 VPLGLDDDGYPPKRWRPRWIADWFFPS 458
>Os11g0594900
Length = 404
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 20/133 (15%)
Query: 10 WADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWL---------NLL 60
W DL D+LGLVL +P A R R+R+VC WR+ A + P P P L
Sbjct: 65 WNDLPGDLLGLVLGHIPCAAGRARVRSVCSSWRNAAAIQRPPRPLPMLVFSRFGFVSFSS 124
Query: 61 DGTFLSISDGEIHRMPLPDDASC--YGSIDNWLFLT-------DSDDGCSLMNPFSKATL 111
+ + I+D E R+PL +D S GS D WL T D+ C L+N FS+ T+
Sbjct: 125 FSSVMVIADAEFTRIPLHEDESLRWVGSFDEWLVGTRPGSVCKDAHSHCFLVNAFSRETI 184
Query: 112 QLPKLA--RIWHH 122
QLP+ + R+ HH
Sbjct: 185 QLPRPSAFRLSHH 197
>Os11g0594600 Protein of unknown function DUF295 family protein
Length = 416
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 69/129 (53%), Gaps = 19/129 (14%)
Query: 5 TQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTF 64
Q SWAD+ DI+G+V+ RLPS+ DR RLR+VC+ WR+ A+L PPP P L L + F
Sbjct: 12 AQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQAWRAAARLHRPPPPLPLLVLSNLAF 71
Query: 65 LSIS-DG---EIHRMPLP--------DDASCYGSIDNWLFLTD-------SDDGCSLMNP 105
DG E R+PLP D C GS + WL + D C L+NP
Sbjct: 72 SGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACFLVNP 131
Query: 106 FSKATLQLP 114
FS+ + LP
Sbjct: 132 FSREVVNLP 140
>Os04g0329500 Protein of unknown function DUF295 family protein
Length = 467
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 21/133 (15%)
Query: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTFLSI 67
S WA LQ DILG+VL LP LADR R+R+VCR WR++A LPPP P L L F S+
Sbjct: 67 SLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPGFKFSSL 126
Query: 68 SDGE----IHRMPLP-----DDASCYGSIDNWL------------FLTDSDDGCSLMNPF 106
SD + +P+P DD C G D WL + D+D C L+N F
Sbjct: 127 SDKGDLMPVRCVPVPKEVAADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNVF 186
Query: 107 SKATLQLPKLARI 119
S+ ++LP+L +
Sbjct: 187 SRKVIRLPQLCHM 199
>Os04g0317300 Protein of unknown function DUF295 family protein
Length = 445
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 21/133 (15%)
Query: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTFLSI 67
S WA LQ DILG+VL LP LADR R+R+VCR WR++A LPPP P L L F S+
Sbjct: 67 SLWAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPGFKFSSL 126
Query: 68 SDGE----IHRMPLP-----DDASCYGSIDNWL------------FLTDSDDGCSLMNPF 106
SD + +P+P DD C GS WL + D+D C L+N F
Sbjct: 127 SDKGDLMPVRCVPVPKEVAADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNVF 186
Query: 107 SKATLQLPKLARI 119
S+ ++LP+L +
Sbjct: 187 SRKVIRLPQLCHM 199
>Os11g0154200
Length = 453
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 113/369 (30%), Positives = 148/369 (40%), Gaps = 97/369 (26%)
Query: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQ------------LLTLPPPFP 55
S W+DL ++ GLV RL S DR R RAVC WR A+ L LPP P
Sbjct: 53 SPWSDLPPELAGLVFCRLLSHGDRRRFRAVCSDWRLAAREQVAVTTGPSSSSLQLPPSLP 112
Query: 56 WLNLLDGTFLSISDGEIHRMP-LPDDASCYGSIDNWLFLTDSD----DGCSLMNPFSKAT 110
WL L T+ S+ DGE+HR P C GS D WL + L NPFS A
Sbjct: 113 WLALDRRTYQSLPDGEVHRFADGPGIMVCRGSFDGWLLYHRNGYRDIRSSFLWNPFSGAV 172
Query: 111 LQLPKLARIWHHERGNAYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVC---I 167
L LP + C +N R VVC +
Sbjct: 173 LDLPSRC----DDAAGGEPMC-----------------------FVNAIKRKIVVCSPDL 205
Query: 168 VHRSISTDSFRFHDRPIKNNFY----------DIAFCGGKLY------ALSCGKLFTVEM 211
V ++ S FH P K++ + DIAF GKLY AL + FT
Sbjct: 206 VAAAVEYTSLIFH-LPNKHSSWARTNPNICCHDIAFHHGKLYSINNNDALFVHEFFTTTA 264
Query: 212 SEVHIEKPKVPHVECIVEDFPTESHSQPCPEN------HICVTWPYLVAS-GGRLLNVIR 264
++ +V D+ + ++P E+ H+ T YLVAS G+LL
Sbjct: 265 ADRGGGSARV----TASSDWAAVTDARPPREHLGNHGYHLRFT-SYLVASLAGKLL---- 315
Query: 265 LVGVPFPPEDDDDIFKDS---LTFSF-------EVYEADLNTGSRMWRRVESLG-DQALF 313
LV P D++F L FS V+EAD+ +R W V +G DQALF
Sbjct: 316 LVRWSLP----DELFSGEGGRLAFSLLSNLITVRVFEADME--ARRWTEVTDIGDDQALF 369
Query: 314 VGRHYSKSL 322
V S++L
Sbjct: 370 VSATCSRAL 378
>Os04g0316800 Protein of unknown function DUF295 family protein
Length = 1316
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 112/403 (27%), Positives = 156/403 (38%), Gaps = 90/403 (22%)
Query: 8 SSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLD-GTFLS 66
S WA LQ DILG+VL LP LADR R+RA L + P F + +L D G F+
Sbjct: 58 SLWAGLQPDILGIVLHFLPCLADRARVRANGHV-LPPPLPLLVLPGFKFSSLSDKGDFMP 116
Query: 67 ISDGEIHRMPLPDDASCYGSIDNWL------------FLTDSDDGCSLMNPFSKATLQLP 114
+ + + DD C GS WL + D+D C L+N FS+ ++LP
Sbjct: 117 VRCVPVPKEVAADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNVFSRKVIRLP 176
Query: 115 KLARIWHHERGN--AYNACTRLFYKXXXXXXXXXXXXXXXXXXMNDPLRHSVVCIVHRSI 172
+L H R N AY++ T +ND S +C V S
Sbjct: 177 QLC----HMRYNFPAYSSKT----------LRIVNGSGEVHFGVNDIYTMS-LCNVALSA 221
Query: 173 STDSFRF-------------------------------HDRPIKNNFYDIAFCGGKLYAL 201
S +S ++ D P +FY GKLY L
Sbjct: 222 SPESSKYIVAASSDHKGAPVPALWQPGMISWQVCSGVEIDGPRDLSFYQ-----GKLYML 276
Query: 202 --SCGKLFTVEMSEVHIEKPKVPHVECIVEDFPTESHSQPCPENHICVTWPYLVASGGRL 259
+LFT E+ E V +E + + P + P E +V G L
Sbjct: 277 MRHRTRLFTCELEE-DDRGFMVSRIELSLTELP---RNHPYQEGGAISC--NMVVWRGEL 330
Query: 260 LNVIRLVGVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRRVESLGDQALFVGRHYS 319
L +IR + D K L EV+ D++T + SL +FVG
Sbjct: 331 LLIIR--------HYNGDYRKRQL-HKVEVFALDVDTNPYGLTEIHSLNGDCIFVGLGGC 381
Query: 320 KSLSAAEYVGAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRSGV 362
KS A + G + D IYF+ DD+ P D +Y+MR GV
Sbjct: 382 KSFPAGLHHGVEGDHIYFVPDDW-----RPY-DTFVYSMRDGV 418
>Os06g0707300 Protein of unknown function DUF295 family protein
Length = 472
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 66/148 (44%), Gaps = 34/148 (22%)
Query: 3 AATQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRS------NAQLLTLPPPFPW 56
AA + WADL D+L VL RLP + DR+R VC W+S A+ PP W
Sbjct: 9 AAVRRPGWADLPRDLLESVLGRLP-VPDRLRFPGVCTAWQSADAASATARFRAAQPP--W 65
Query: 57 LNL---------------------LDGTFLSISDGEIHRMPLP----DDASCYGSIDNWL 91
L L L+ FLS+SDG + +P P + C GS D WL
Sbjct: 66 LMLPFNPTARRQSPSGGGGGDGRFLEARFLSLSDGRAYAIPQPAPPVSERLCVGSSDGWL 125
Query: 92 FLTDSDDGCSLMNPFSKATLQLPKLARI 119
D+ L+NP + A +QLP + +
Sbjct: 126 VTADAASELHLLNPLTGAQVQLPSVTTL 153
>Os08g0336000
Length = 418
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 57/113 (50%), Gaps = 15/113 (13%)
Query: 18 LGLVLRRLPSLADRVRLRAVCRPWRSNAQ-LLTLPPPFPWLNLLDGTFLSISDGEIHRMP 76
L +VL L SLADR R VCR W + + PP PWL G + +SD +HR+P
Sbjct: 14 LEIVLSHLQSLADRASFRGVCRQWAAVWRDQWPRTPPMPWLA-APGHCVDLSDASVHRVP 72
Query: 77 LP-----DDASCYGSIDNWLFLTDSDDGCS--------LMNPFSKATLQLPKL 116
LP D C GS+ NW+ LT L+NPFS A++QLP L
Sbjct: 73 LPSGVDVDGIVCCGSLGNWIALTPKRRRWRPRHQVRPLLLNPFSGASVQLPIL 125
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.323 0.139 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,342,873
Number of extensions: 689860
Number of successful extensions: 1928
Number of sequences better than 1.0e-10: 24
Number of HSP's gapped: 1882
Number of HSP's successfully gapped: 28
Length of query: 393
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 290
Effective length of database: 11,657,759
Effective search space: 3380750110
Effective search space used: 3380750110
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)