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Os06g0148800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF295 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.95 (0.0138) R2 : 0.00121
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0216 (0.0291) R2dN8 : 0.00157 R2N8 : 0.00121
σ : 0.26
deviance : 31
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
22.31 0.222 9.92 0.489 0.0649 -0.313 -0.0262 0.444 0.167 7.71 40.69 1119 -- --
22.87 0.223 9.92 0.478 0.0526 -0.318 -0.0276 -- 0.16 7.64 40.78 1109 -- --
22.3 0.22 9.92 0.488 0.062 -0.316 -- 0.451 0.168 7.54 40.7 1113 -- --
22.83 0.223 9.92 0.459 0.0448 -0.32 -- -- 0.157 7.64 40.69 1103 -- --
22.44 0.221 9.91 0.481 -- -0.333 -- 0.455 0.166 -- 40.69 1092 -- --
26.15 0.24 9.94 0.357 0.162 -- -0.114 -- 0.0598 8.92 -- -- -- --
26.2 0.24 9.94 0.353 0.163 -- -- -- 0.0596 8.81 -- -- -- --
22.74 0.222 9.93 0.369 -- -0.394 -- -- 0.141 -- 45.74 1063 -- --
26.53 0.24 9.93 -- 0.0975 -0.405 -- -- 0.111 7.53 39.99 1163 -- --
27.71 0.246 9.95 0.353 -- -- -- -- 0.0608 -- -- -- -- --
29.48 0.254 9.95 -- 0.164 -- -- -- 0.0203 8.65 -- -- -- --
26.44 0.239 9.94 -- -- -0.459 -- -- 0.0963 -- 39.98 1066 -- --
31 0.26 9.95 -- -- -- -- -- 0.0216 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 22.30 atmosphere 1005 270 > th dose independent rect. 22 6
7 22.80 atmosphere 1005 10 > th dose independent rect. 24 6
8 22.83 atmosphere 1005 10 > th dose dependent rect. 24 6
10 22.90 humidity 70 1440 > th dose independent rect. 9 3
13 22.93 atmosphere 1000 270 > th dose dependent rect. 23 4
17 23.01 humidity 70 720 > th dose dependent rect. 21 1
18 23.01 radiation 40 1440 > th dose dependent rect. 9 3
38 23.03 humidity 70 1440 < th dose independent rect. 9 3
48 23.08 radiation 40 1440 < th dose independent rect. 11 1
49 23.08 radiation 30 1440 > th dose dependent rect. 11 1
50 23.08 temperature 25 720 > th dose dependent rect. 22 2
52 23.10 radiation 40 1440 < th dose independent rect. 9 3
58 23.14 radiation 40 1440 > th dose dependent sin 11 NA
61 23.15 humidity 90 14400 > th dose dependent rect. 3 6
62 23.16 radiation 40 1440 > th dose independent rect. 9 3
63 23.16 radiation 10 1440 > th dose dependent rect. 11 1
90 23.20 radiation 40 1440 > th dose independent rect. 15 21
110 23.21 humidity 90 14400 > th dose dependent rect. 20 13
115 23.22 radiation 10 1440 > th dose dependent rect. 9 1
147 23.25 radiation 40 1440 > th dose independent rect. 11 1
152 23.26 radiation 30 4320 < th dose independent rect. 7 1
153 23.26 humidity 90 14400 > th dose dependent sin 8 NA
179 23.29 radiation 40 1440 > th dose independent rect. 13 23
184 23.30 radiation 30 4320 < th dose independent rect. 22 10
185 23.30 radiation 40 1440 < th dose independent rect. 16 20
193 23.30 radiation 10 1440 > th dose dependent rect. 16 20
200 23.31 radiation 40 1440 < th dose independent rect. 22 14
284 23.35 radiation 30 4320 < th dose independent rect. 24 8
296 23.36 humidity 70 1440 > th dose independent rect. 19 17
297 23.36 radiation 40 1440 < th dose dependent rect. 9 1
320 23.38 atmosphere 1005 270 > th dose independent rect. 14 14
321 23.38 humidity 70 1440 < th dose independent rect. 19 17
323 23.38 wind 7 4320 > th dose dependent rect. 15 1
335 23.39 radiation 30 4320 < th dose independent rect. 2 6
336 23.39 radiation 40 1440 < th dose independent rect. 13 23
349 23.40 radiation 40 1440 > th dose independent sin 9 NA
351 23.40 humidity 80 1440 < th dose dependent rect. 9 2
363 23.41 atmosphere 1015 1440 < th dose independent rect. 3 3
364 23.41 atmosphere 1005 10 > th dose independent rect. 2 4
366 23.41 atmosphere 1005 10 > th dose dependent rect. 24 4
367 23.41 humidity 50 720 > th dose dependent rect. 19 5
410 23.43 humidity 70 1440 > th dose independent rect. 22 14
447 23.45 humidity 90 14400 > th dose dependent rect. 21 5
508 23.47 atmosphere 1005 10 > th dose independent rect. 18 12
611 23.51 atmosphere 1005 270 > th dose dependent rect. 24 1
612 23.51 radiation 20 4320 > th dose dependent rect. 6 2
615 23.51 radiation 40 1440 < th dose dependent rect. 9 3
654 23.52 radiation 40 1440 < th dose independent sin 7 NA
662 23.52 wind 5 10 < th dose dependent rect. 24 6
697 23.53 radiation 40 1440 < th dose dependent rect. 11 1
705 23.54 wind 7 4320 > th dose independent rect. 15 1
709 23.54 humidity 90 14400 > th dose dependent no NA NA
722 23.55 radiation 10 1440 > th dose dependent sin 7 NA
756 23.56 humidity 80 720 > th dose independent rect. 21 1
850 23.59 wind 9 4320 > th dose independent rect. 11 1
851 23.59 wind 7 4320 < th dose independent rect. 15 1
865 23.59 wind 3 10 < th dose dependent rect. 2 4
884 23.60 radiation 40 1440 > th dose dependent no NA NA