BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os06g0148800 Os06g0148800|Os06g0148800
(387 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os06g0148800 Protein of unknown function DUF295 family protein 753 0.0
Os06g0148900 Protein of unknown function DUF295 family protein 325 3e-89
Os06g0148600 Protein of unknown function DUF295 family protein 177 1e-44
Os12g0585200 Protein of unknown function DUF295 family protein 148 7e-36
Os06g0148700 Cyclin-like F-box domain containing protein 129 4e-30
Os12g0594400 96 4e-20
Os11g0594600 Protein of unknown function DUF295 family protein 90 2e-18
Os08g0410266 Cyclin-like F-box domain containing protein 86 7e-17
Os02g0159800 Cyclin-like F-box domain containing protein 81 1e-15
Os07g0499900 Cyclin-like F-box domain containing protein 81 2e-15
Os11g0154100 77 2e-14
Os07g0140900 75 9e-14
Os12g0592500 Cyclin-like F-box domain containing protein 70 3e-12
Os06g0148500 Cyclin-like F-box domain containing protein 69 4e-12
>Os06g0148800 Protein of unknown function DUF295 family protein
Length = 387
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 375/387 (96%), Positives = 375/387 (96%)
Query: 1 MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXX 60
MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERK
Sbjct: 1 MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKLLPPPLPW 60
Query: 61 XXXXDGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD 120
DGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD
Sbjct: 61 LFLPDGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD 120
Query: 121 LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITSGQPHTVVKW 180
LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITSGQPHTVVKW
Sbjct: 121 LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITSGQPHTVVKW 180
Query: 181 SPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDVKCIHSTPRDVGDE 240
SPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDVKCIHSTPRDVGDE
Sbjct: 181 SPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDVKCIHSTPRDVGDE 240
Query: 241 DEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVD 300
DEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVD
Sbjct: 241 DEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVD 300
Query: 301 LSSEHGRWIKVDTLMGHSLFVSESCSESLTAGAEEDCIYFMNDGIMNRIPKDPLSDSGVY 360
LSSEHGRWIKVDTLMGHSLFVSESCSESLTAGAEEDCIYFMNDGIMNRIPKDPLSDSGVY
Sbjct: 301 LSSEHGRWIKVDTLMGHSLFVSESCSESLTAGAEEDCIYFMNDGIMNRIPKDPLSDSGVY 360
Query: 361 NMRDGMVAPLMPETAVTEHLAAHDESW 387
NMRDGMVAPLMPETAVTEHLAAHDESW
Sbjct: 361 NMRDGMVAPLMPETAVTEHLAAHDESW 387
>Os06g0148900 Protein of unknown function DUF295 family protein
Length = 368
Score = 325 bits (833), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 206/388 (53%), Positives = 237/388 (61%), Gaps = 63/388 (16%)
Query: 1 MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXX 60
MA PC+G WPDLPSELLGLVLLRLPSH DRVRLRAVCRPWRSSAR+E
Sbjct: 33 MATPEPCSGRPWPDLPSELLGLVLLRLPSHADRVRLRAVCRPWRSSARVELDLLPPPLPW 92
Query: 61 XXXXDGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD 120
GAF+TLPDGAAHR A+PGD HL TGSGLL+ H DGM SLMNPSS ATTPL
Sbjct: 93 LLLRGGAFITLPDGAAHRLPAVPGDATHLASTGSGLLIVHGDGMLSLMNPSSLATTPLAA 152
Query: 121 LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITSGQPHTVVKW 180
LAAV I +FQ G+ +Y S
Sbjct: 153 LAAVLPKYISSIVDIASFQ-GK----------------LYYLTS---------------- 179
Query: 181 SPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDVKCIHSTPRDVGDE 240
D+ Q +LY F ++N ++ ++CI ST +D+G
Sbjct: 180 ---------DVRKRQEELY--IFGVDNAKQ--------------IGIRCISSTLKDIG-- 212
Query: 241 DEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSI-KRTRRFDVFEAV 299
+E+WF P ST+RY RYLVA DRLLMV RWI NLPP+ P DS I KRTRRF+VFEA
Sbjct: 213 EESWFGPCSTERYATERYLVASNDRLLMVRRWI--NLPPIYPSDSGIVKRTRRFEVFEAA 270
Query: 300 DLSSEHGRWIKVDTLMGHSLFVSESCSESLTAGAEEDCIYFMNDGIMNRIPKDPLSDSGV 359
DLSS GRWIKVDTLMGH+LFVS+ CS+SL+AGAEEDCIYFM++ I N P+DP DSGV
Sbjct: 271 DLSSGCGRWIKVDTLMGHALFVSKGCSKSLSAGAEEDCIYFMHEDIKNGKPEDPFLDSGV 330
Query: 360 YNMRDGMVAPLMPETAVTEHLAAHDESW 387
YNMRDG VAPL+ ET V E LA H W
Sbjct: 331 YNMRDGTVAPLLTETLVAEPLAVHGGPW 358
>Os06g0148600 Protein of unknown function DUF295 family protein
Length = 393
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 147/392 (37%), Positives = 198/392 (50%), Gaps = 39/392 (9%)
Query: 1 MAAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXX 60
MAA + SW DL ++LGLVL RLPS DRVRLRAVCRPWRS+A+L
Sbjct: 2 MAATQ---SSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQL--LTLPPPFPW 56
Query: 61 XXXXDGAFLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPD 120
DG FL++ DG H R+ +P D + + L L +D SLMNP S AT LP
Sbjct: 57 LNLLDGTFLSISDGEIH-RMPLPDDASCYGSIDNWLFLTDSDDGCSLMNPFSKATLQLPK 115
Query: 121 LAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNS----SKVIIT--SGQP 174
LA ++H E Y + +L + P+ + S+ +A N S V I S
Sbjct: 116 LARIWHHERGNAY-NACTRLFYKLAVPLPLDLSSDSLVAVLMNDPLRHSVVCIVHRSIST 174
Query: 175 HTVVKWSPPDSSYILDIALFQGKLYCLT----FDIENCQEELYILEVRDEEPMVSDVKCI 230
+ P + DIA GKLY L+ F +E + EV E+P V V+CI
Sbjct: 175 DSFRFHDRPIKNNFYDIAFCGGKLYALSCGKLFTVE-------MSEVHIEKPKVPHVECI 227
Query: 231 HSTPRDVGDEDEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKR- 289
D E + P + T+ YLVA G RLL V R + + PP D I +
Sbjct: 228 ---VEDFPTESHSQPCPENHICVTW-PYLVASGGRLLNVIRLVGVPFPP--EDDDDIFKD 281
Query: 290 --TRRFDVFEAVDLSSEHGRWIKVDTLMGHSLFVSESCSESLTA----GAEEDCIYFMND 343
T F+V+EA DL++ W +V++L +LFV S+SL+A GA+EDCIYFM D
Sbjct: 282 SLTFSFEVYEA-DLNTGSRMWRRVESLGDQALFVGRHYSKSLSAAEYVGAQEDCIYFMCD 340
Query: 344 GIMNRIPKDPLSDSGVYNMRDGMVAPLMPETA 375
R +DPL D+G+YNMR G++ PL+ E
Sbjct: 341 DYF-RSDEDPLCDAGIYNMRSGVITPLLQENT 371
>Os12g0585200 Protein of unknown function DUF295 family protein
Length = 418
Score = 148 bits (373), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 151/429 (35%), Positives = 205/429 (47%), Gaps = 81/429 (18%)
Query: 2 AAQRPCNGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRS-SARLERKXXXXXXXX 60
AAQ P W DLP++LLGLVLLRLPS DRVRLRAVCR WR+ +AR
Sbjct: 3 AAQPPL---PWGDLPADLLGLVLLRLPSLPDRVRLRAVCRSWRAGAARGRHPRLPPPLPW 59
Query: 61 XXXXDGAFLTLPDGAAHRRLAIP--GDVAHLVPTGSGLLLAHNDGMFSLMNP-------S 111
DG + L IP G V HL L+ H DG SL+NP +
Sbjct: 60 LALRDGGLVDLDGEPIRCPTPIPRHGVVGHLAVDNLAFLI-HRDGGCSLLNPLSSSASAA 118
Query: 112 SSATTPLP--DLAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVV---SEHFIAFYFNSSK 166
++A TPLP +LAAV D A +GQ + I A V S+ ++ +SS
Sbjct: 119 TAAITPLPWLNLAAV----------DGA--IGQPGVFIGIGAYVNVYSKSVLSSPLDSSP 166
Query: 167 ----VIITSGQPHTVVK--------------WSPP----DSSYILDIALFQGKLYCLTFD 204
++TSG H V +P + + DIA G LY LT
Sbjct: 167 DPLVAVVTSGGRHVAVAPCKRRGVVTIVSGLMAPQIPGLNPTRFSDIAFLGGNLYTLTN- 225
Query: 205 IENCQEELYILEVR----DEEPMVSDVKCIHSTPRDVGDEDEAWFNPHSTDRYTFHRYLV 260
E L +L++ D+ P S +CI P ++ E + + + ++ RYLV
Sbjct: 226 ----AEGLLVLDLGSNGVDDPPNASHRRCIADDP----NQHEYYIDGSTKNKSLVLRYLV 277
Query: 261 ADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVDLSSEHGRWIKVDTLMGHSLF 320
RLLMV RW+N + +TR F+VF AV +S HG+W+KVD+L ++F
Sbjct: 278 GSNGRLLMVRRWMNCR---QQYYAGDMDKTRGFEVFAAV-ISDGHGQWVKVDSLGDQAIF 333
Query: 321 VSESCSESLTA-----GAEEDCIYFMNDGIMNRIPK------DPLSDSGVYNMRDGMVAP 369
+S CS+S+TA G ++DCIYFM+ N + DPL DSGVYNMRDG +
Sbjct: 334 LSSECSKSVTASQCADGIQQDCIYFMHRIYDNPTKECHGPCVDPLGDSGVYNMRDGTINL 393
Query: 370 LMPETAVTE 378
L P ++E
Sbjct: 394 LRPRAVMSE 402
>Os06g0148700 Cyclin-like F-box domain containing protein
Length = 291
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 146/324 (45%), Gaps = 43/324 (13%)
Query: 8 NGGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGA 67
SW DL ELLGLVL RLPS DRVRLRAVCRPWRS+ARL+ +G
Sbjct: 6 QSSSWADLQPELLGLVLTRLPSLADRVRLRAVCRPWRSNARLQPL--PPPLPWLTLLNGT 63
Query: 68 FLTLPDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPDLAAVFHG 127
FL++ DG H + +P D + + L L+H+DG FSLMN S AT LP L ++
Sbjct: 64 FLSISDGEIH-CMPLPDDASCHCSIDNWLFLSHDDGGFSLMNLFSKATLQLPKLDTIWCH 122
Query: 128 EIKCKYPDTAFQLGQRRITPI-IKAVVSEHFIAFYFNSS--KVIITSGQPHTVVKWSPPD 184
+ Y F L + P + + +A N S K + P +
Sbjct: 123 HL--WYAAPKFPLFYKLAVPSPLDFSPTSLVVALIMNRSHQKALCICQPPVATESFRVEG 180
Query: 185 SSY--ILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDVKCIHSTPRDVGDEDE 242
S+ + D GKLY L N +L+ILE+ DE
Sbjct: 181 STMEGMQDFTFLDGKLYVL-----NNFNKLFILEI-----------------------DE 212
Query: 243 AWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVDLS 302
+ + RY YLV G LLMV R++ + LP P RT F VFEA DL+
Sbjct: 213 SHIDYLIMRRY----YLVESGGGLLMVTRYVGIVLPLAEPNSFKHSRTLSFKVFEA-DLT 267
Query: 303 SEHGRWIKVDTLMGHSLFVSESCS 326
+ W +V +L G +LFV CS
Sbjct: 268 TGSRMWRRVTSLGGRALFVGTHCS 291
>Os12g0594400
Length = 368
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 101/334 (30%), Positives = 147/334 (44%), Gaps = 60/334 (17%)
Query: 88 HLVPTGSGLLLAHNDGMFSLMNPSSSATT-------PLPDLAAVFHGEI-KCKYPDTAFQ 139
H V G+ + L H+DG SLMNP S+A+ PLP+LAA + C+ P A
Sbjct: 34 HPVGGGNLVFLEHDDGGCSLMNPLSAASGDRDDPLLPLPELAAAVRRAVDSCETPTVATY 93
Query: 140 LGQRRITPIIKA---VVSEH--------FIAFYFNSSKVIITSGQPH--TVVKWSPPD-- 184
+ + +I + VV++ A N V I++ + H +S D
Sbjct: 94 TPKPSYSTVIMSSSPVVADSSSSPPDTLVAALILNRCAVAISTCKRHDGAAASFSFMDER 153
Query: 185 ---------SSYILDIALFQGKLYCLTFDIENCQEELYILEVRDEEPMVSDV---KCIHS 232
++ I IA GKLY +T +E L++L++ + CI
Sbjct: 154 SRIRSVWLRATAICAIAFLHGKLYAVT-----SKEGLHVLDLDNGGGGEGGAVLRPCIAD 208
Query: 233 TPRDVGDEDEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINLNLPPMLPRDSSIKRTRR 292
P E ++ + RY+V G RLLMV W +LPP P S+ + R
Sbjct: 209 DP-----EKKSVHVDVERRGHLVVRYVVESGGRLLMVRWW--KSLPP--PVWSADRPPSR 259
Query: 293 FDVFEAVDLSSEHGRWIKVDTLMGHSLFVSESCSESLTAGA-------EEDCIYFMNDGI 345
FDV EA D GRW VD+L G +LF+ ++ S S+ AG EDCIYFM
Sbjct: 260 FDVLEAAD---GLGRWKAVDSLRGRALFLGKADSRSVVAGGGGGGAGAREDCIYFMRRSF 316
Query: 346 MNRIPKDPLSDSGVYNMRDGMVA-PLMPETAVTE 378
++ SGVY+MR G ++ P +PE E
Sbjct: 317 WYPSKEEDFGQSGVYDMRSGEISPPQLPERGTAE 350
>Os11g0594600 Protein of unknown function DUF295 family protein
Length = 416
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 110/419 (26%), Positives = 170/419 (40%), Gaps = 93/419 (22%)
Query: 11 SWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGAFLT 70
SW D+P++++G+V+ RLPS DR RLR+VC+ WR++ARL R +
Sbjct: 16 SWADIPADIIGVVVGRLPSVEDRARLRSVCQAWRAAARLHRPPPPLPLLVLSNLAFSGFC 75
Query: 71 LPDGAAH--RRLAIPGDVA-------HLVPTGSGLLLA--------HNDGMFSLMNPSSS 113
+ DGA RR+ +P +V V + G L DG L+NP S
Sbjct: 76 V-DGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACFLVNPFSR 134
Query: 114 ATTPLPDLAAVFHGEIKCKYPDTAFQLGQRRITPIIKAV----VSEHFIAFYFNSSKVII 169
LP + T R PII + H + + KVI+
Sbjct: 135 EVVNLPP-----------PFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKVIL 183
Query: 170 TS----GQPHTVVK------------WSPPDSSYIL----------DIALFQGKLYCLTF 203
+S G +TV W P +S+ + D+A +QGK Y L+
Sbjct: 184 SSPPGSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSK 243
Query: 204 DIENCQEELYILEVRDEEP--MVSDV-KCIHSTPRDVGDEDEAWFNPHSTDRYTFHRYLV 260
N L+ E+ +++ MVS V +C+ P D Y +V
Sbjct: 244 LTTN----LFAFEITEDDCGMMVSRVERCVTELP-------------QVKDSYGQRWNMV 286
Query: 261 ADGDRLLMVARWINLNLPPMLPRDSSIKRTRRFDVFEAVDLSSEHGRWIKVDTLMGHSLF 320
+LL+V R+I + VF +D+S+ R+ ++++L G +F
Sbjct: 287 EWHGKLLLVVRYIG--------GSEGWHNICKVSVF-VMDVSTNPFRFTEINSLDGDCIF 337
Query: 321 VSESCSESLTA----GAEEDCIYFMNDGIMNRIPKDPLSDSGVYNMRDGMVAPLMPETA 375
+S S S A G E+D +YF+ DG + P D VYNMRD +AP + +
Sbjct: 338 ISPCSSMSFLACQYDGIEDDLVYFI-DGYLFPAKNGPPFDRFVYNMRDCTLAPFAADIS 395
>Os08g0410266 Cyclin-like F-box domain containing protein
Length = 638
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 172/414 (41%), Gaps = 67/414 (16%)
Query: 11 SWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGAFLT 70
SW D+P +L VL LP+ DR AVC WR +AR DGAF
Sbjct: 19 SWADIPRDLAVQVLRFLPAQVDRACFAAVCPQWRGAAR--NALLPAPLPLLALPDGAFYC 76
Query: 71 LPDGAAHR--RLAIPGDVAHLVPTGSGLLLAHNDGMFSLMNPSSSATTPLPDLAAV---- 124
LP G R R G G L+ H+DG F L++P + AT LP L+ V
Sbjct: 77 LPYGKPFRFPRAGCAG--YKTAACGRWLVFPHDDGCF-LVDPFAGATVTLPALSRVRLRP 133
Query: 125 --------------FHGEIKCKYPD-TAFQLGQRRITPIIKAVV-SEHFIAFYFNSSKVI 168
+ + YP T + PI K ++ S++ +A + SS +
Sbjct: 134 PNAVASYVNVGIAGRNAHVSMFYPHATWMHIKTSDKMPINKLLLCSQNLVAAFIGSS--L 191
Query: 169 ITSGQPHTVVKWSPPDSSYIL----------DIALFQGKLYCLTFDIENCQEELYILEVR 218
+G+ ++ P SS+ + D+A ++GKLY L D E L ++ +
Sbjct: 192 ANAGRNSQILVCQPGASSWSVRAYDKCKLFEDMAFYRGKLYALAHD-----ENLLVVNI- 245
Query: 219 DEEPMVSDVKCIHSTPRDVGDEDEAWFN------PHSTDRYTFHRYLVADGDRLLMVARW 272
++P D + S V D W + ++ YLV LLMV R
Sbjct: 246 SQDPNTGDPQI--SQIGQVIKGDPTWSSVLITDDDDTSTTDKKKLYLVESCGVLLMVRRK 303
Query: 273 INLNLPPMLPRDSSIKRTRRFDVFEAVDLSSEHGRWIKVDTL-MGHSLFVSESCSESLTA 331
+ + + + F+VF+A DL E+ RW+ V TL + +F+ CS++++A
Sbjct: 304 VCCR----VVGKTVVPGQNEFEVFKA-DL--ENSRWVNVTTLGVDQMVFLGRPCSKAVSA 356
Query: 332 ---GAEEDCIYFMNDGIMNRIP---KDPLSDSGVYNMRDGMVAPLMPETAVTEH 379
G D I+F++D + N ++ + VY+MR A + + TE
Sbjct: 357 SQYGMPNDQIFFLDDVMENNKEYSYEEETTSVNVYDMRSAEDAFIFELSVATEK 410
>Os02g0159800 Cyclin-like F-box domain containing protein
Length = 415
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 106/403 (26%), Positives = 168/403 (41%), Gaps = 58/403 (14%)
Query: 6 PCN--GGSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXX 63
PC+ SW DLP ++ G VL RLPS+ DR+ A CR WR+SAR E +
Sbjct: 14 PCSPPASSWRDLPLDIAGEVLRRLPSYADRICFGATCRSWRTSAR-EHRAPPPLSPCLCF 72
Query: 64 XDGAFLT-LPDGAAHRRLAIPGDVAHLVPTGSGLLL-AHNDGMFSLMNPSS--SATTPLP 119
DG+F P+ A R +P L G LL H+DG + L++P S +A PLP
Sbjct: 73 ADGSFRGFFPEDA--RPFRLPAAAGWLGSCGEWLLYRRHDDGAYLLVDPFSKAAAMAPLP 130
Query: 120 DLAA--------VFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITS 171
++ V E ++ + + P A + + ++ + ++
Sbjct: 131 SVSRLHVRHDPIVAVDERDLRWCRPTWLPRENTGEPQAAASLLKLAVSPAADVVAAVVGE 190
Query: 172 GQPHTVVKWSPPDSSY----------ILDIALFQGKLYCLTFDIENCQEELYI-LEVRDE 220
G+ + P ++ I D A +QGKLY +++ ++ L + L E
Sbjct: 191 GRHGKLAVCRPGAPAWSVSGGDGWRRIKDTAFYQGKLYA----VDHNEDLLAVTLAADGE 246
Query: 221 EPMVSDV-KCIHSTPRDVGDEDEAWFNPHSTDRYTFHRYLVADGDRLLMVARWINL-NLP 278
P VS + + I+ P + R T H YLV G LL+V R + ++
Sbjct: 247 PPAVSRIDRVINGKPPGAA----------ALLRVTLH-YLVDSGGELLLVRREVQRSSMV 295
Query: 279 PMLPRDSSIKRTRRFDVFEAVDLSSEHGRWIKVDTL----MGHSLFVSESCSESLTAGAE 334
P + + RF VF A RW +V T+ G +LFV CS ++ +
Sbjct: 296 RTQPWQHTAELQDRFAVFRA---DFRRSRWRRVKTIGDESGGRALFVGRWCSRAVRVAGD 352
Query: 335 E--DCIYFMNDGIMN----RIPKDPLSDSGVYNMRDGMVAPLM 371
D ++F+ DG + R + L S +R + PLM
Sbjct: 353 RWADQVFFLEDGTGDEWHTRAQRCSLRGSTFGCVRPNELLPLM 395
>Os07g0499900 Cyclin-like F-box domain containing protein
Length = 454
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 106/250 (42%), Gaps = 43/250 (17%)
Query: 12 WPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGAFLTL 71
W DLPS+LLGLV+ RLP DR R RAVCR W S+ R +G F+T+
Sbjct: 10 WSDLPSDLLGLVIARLPFPADRARFRAVCRAWHSALR-RHVAAPPQLPWIVLPEGTFVTV 68
Query: 72 PDGAAHRRLAIPGDVAHLVPTGSGLLLAHNDG-----------------MFSLMNPSSSA 114
DG H R+A P + + G L H F L NP + A
Sbjct: 69 SDGGVH-RMAFPESNTVCIGSTDGWLALHRTDNDDDDSVDGARTTKTRHTFLLHNPFTGA 127
Query: 115 TTPLPDLAAVFHGEIKCKYPDTAFQLGQRRITPIIKA--VVSEHFIAFYFNSSKVIITSG 172
T PL +L + + ++ R II++ H +A N +
Sbjct: 128 TVPLAELGDILDDDFFEEF---------RVCKVIIRSHPNGGGHLVAVMTNHWDCPLILC 178
Query: 173 QPHTVVKWSPPDSSY----ILDIALFQGKLYCLTFDIENCQEELYILEV---RDEEPMVS 225
QP + W+P + ++DIA F KLY +T E+L+ +++ +D +P V+
Sbjct: 179 QPGKGI-WTPDSCTMPFVRVVDIAFFADKLYLIT-----KAEDLFAVDLADDKDGKPTVT 232
Query: 226 DVKCIHSTPR 235
V+ I PR
Sbjct: 233 SVERIIRQPR 242
>Os11g0154100
Length = 458
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 167/420 (39%), Gaps = 96/420 (22%)
Query: 12 WPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGA-FLT 70
WPDL EL G+V RL S+ DR+R +AVCR WR +A R+ D A + +
Sbjct: 28 WPDLLPELAGMVFCRLLSYRDRLRFQAVCRSWRLAA--PRQHPLPPPLPWLSLDRATYQS 85
Query: 71 LPDGAAHRRLAIPGD--VAHLVPTGS--GLLLAHNDGMFS-----------LMNPSSSAT 115
LPDG HR + P D + V GS G LL H L NP S A
Sbjct: 86 LPDGEVHRLVPDPDDDELPGTVCRGSFDGWLLYHRPPEQPPPQPQRQPECFLRNPLSMAK 145
Query: 116 TPLPDLAAVFHGEIKCKYPDTAFQLGQRRITPII------KAVVSEHFIAFY-------- 161
LP+ A V C Y F + + II A ++++FI +
Sbjct: 146 IALPNHAPVGLCPGGC-YDAMCFPKPEEFMRKIIVRSPDHVAAMTDYFILLHLPPKPPQL 204
Query: 162 ----FNSSKVIITSGQPHTVVKWSPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEV 217
F ++ + I G T D+AL+ GKLY ++ EEL++ E
Sbjct: 205 PYWSFTAATISIDDGGLFT-------SHHCWRDMALYHGKLYSIS-----TGEELFVHEF 252
Query: 218 ----------------RDEEPMVSDVKCIHSTPRDVGDEDEAWF---NPHSTDRYTFHRY 258
P + + T + DE+ ++ N H + T
Sbjct: 253 SSSEAVSSPSSSTTTATQHRPRYCRGEVVIDTAPPLDDEEHGYYWVRNLHLVESCT---- 308
Query: 259 LVADGDRLLMVARWINLNLPPMLPRD----SSIKRTRRFDVFEAVDLSSEHGRWIKVDTL 314
GD+ L++ RW LP + + + + DVFEA E+ RW +V+ +
Sbjct: 309 ----GDKPLLMVRW-RWRLPAVYDYRHWCADELSKEIKLDVFEA---DMENRRWSEVEEI 360
Query: 315 MGHSLFVSESCSESL-TAGAEEDCIYFMN--------DGIMNRIPKDPLSDSGVYNMRDG 365
++F+ + S+++ T I+F+ DGI++ I GVYNM++G
Sbjct: 361 GDQAIFLGNTNSKAVPTLPDHGSSIFFLGSIVTDYCLDGIIDGIGD---CAYGVYNMKNG 417
>Os07g0140900
Length = 258
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 94/222 (42%), Gaps = 22/222 (9%)
Query: 12 WPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGAFLTL 71
WPDL EL G+V RL SHGDR+R RAVCR WR +A + + +L
Sbjct: 31 WPDLQPELAGMVFCRLLSHGDRLRFRAVCRRWRLAAWQQHPLPPALPWLNLDGRITYQSL 90
Query: 72 PDGAAHRRLAIPGDV---AHLVPTGS--GLLLAHNDGMFS--LMNPSSSATTPLP----- 119
PDG H R+ +P ++ +V GS G LL LMNP S A LP
Sbjct: 91 PDGEVH-RIPVPDELQAGGTVVCRGSFDGWLLYDRSEQLECFLMNPISKARIDLPYHWHC 149
Query: 120 --DLAAVFHGEIKCKYPDTAFQLGQRRITPIIKAVVSEHFIAFYFNSSKVIITSGQPHTV 177
D A+ + K G+ + I AV S +A S V H+
Sbjct: 150 DDDDDAILPDYGEEKEGQRTMCFGENAVRKI--AVCSPDLVAAVIAGSGVFFYRPGMHST 207
Query: 178 VKWSPPDSSYILDIALFQGKLYCLTFDIENCQEELYILEVRD 219
++ + DIA + GKLY ++ D EL++ E D
Sbjct: 208 WLFASGGPCFARDIAYYNGKLYSISSD-----GELFVHEFSD 244
>Os12g0592500 Cyclin-like F-box domain containing protein
Length = 200
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 10 GSWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLERKXXXXXXXXXXXXDGAFL 69
SW +LP++L+G VLLRLPS DRVRLRA CRPWR+ A+ + DG +
Sbjct: 18 SSWSELPADLIGQVLLRLPSLADRVRLRAACRPWRTDAK-RQAALPPPLPWFALRDGGLV 76
Query: 70 TLPDGAAHRRLA--IPGDVAHLVPTGSGLLLAHNDGM-FSLMNP-SSSATTPLPDLA-AV 124
GA RR A + V + + LAHN SL+NP S+S TPLP LA AV
Sbjct: 77 DH-HGAPVRRCAPILREGVTDYLAVDNLAFLAHNRAACCSLVNPLSASEETPLPQLANAV 135
Query: 125 FHGEIKCKYPDTAFQLGQRRITPIIKAVVSE 155
K+ + +G ++ P +K ++S
Sbjct: 136 LRAMNDSKF----YTVGNTKM-PYVKVILSS 161
>Os06g0148500 Cyclin-like F-box domain containing protein
Length = 81
Score = 69.3 bits (168), Expect = 4e-12, Method: Composition-based stats.
Identities = 30/40 (75%), Positives = 33/40 (82%)
Query: 11 SWPDLPSELLGLVLLRLPSHGDRVRLRAVCRPWRSSARLE 50
SW D ELLGLVL RLPSH DRVRLRAVCRPWRS+A ++
Sbjct: 9 SWADFQPELLGLVLRRLPSHADRVRLRAVCRPWRSNAEMQ 48
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.137 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,628,439
Number of extensions: 631021
Number of successful extensions: 1636
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1607
Number of HSP's successfully gapped: 16
Length of query: 387
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 284
Effective length of database: 11,657,759
Effective search space: 3310803556
Effective search space used: 3310803556
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 157 (65.1 bits)