Os06g0148600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os06g0148600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.27 | 0.346 | 7.85 | 1.79 | 0.303 | 1.12 | 0.0645 | 2.07 | 0.351 | 13 | 21.5 | 1623 | -- | -- |
| 63.79 | 0.372 | 7.89 | 1.43 | 0.302 | 1 | -0.0478 | -- | 0.314 | 12.4 | 22.19 | 2104 | -- | -- |
| 54.15 | 0.343 | 7.85 | 1.81 | 0.298 | 1.09 | -- | 2.07 | 0.354 | 12.8 | 21.6 | 1679 | -- | -- |
| 61.27 | 0.365 | 7.93 | 1.29 | 0.338 | 0.891 | -- | -- | 0.2 | 12.8 | 22.11 | 2218 | -- | -- |
| 59.73 | 0.36 | 7.86 | 1.81 | -- | 1.04 | -- | 1.96 | 0.349 | -- | 21.7 | 1717 | -- | -- |
| 91.59 | 0.449 | 7.86 | 1.66 | 0.305 | -- | 0.147 | -- | 0.51 | 13 | -- | -- | -- | -- |
| 91.68 | 0.448 | 7.86 | 1.67 | 0.305 | -- | -- | -- | 0.511 | 13 | -- | -- | -- | -- |
| 68.22 | 0.385 | 7.93 | 1.29 | -- | 0.918 | -- | -- | 0.204 | -- | 22.1 | 1808 | -- | -- |
| 80.87 | 0.419 | 7.96 | -- | 0.328 | 1.59 | -- | -- | 0.018 | 12.7 | 20.8 | 7974 | -- | -- |
| 97.46 | 0.461 | 7.86 | 1.66 | -- | -- | -- | -- | 0.505 | -- | -- | -- | -- | -- |
| 165.03 | 0.601 | 7.9 | -- | 0.278 | -- | -- | -- | 0.325 | 12.8 | -- | -- | -- | -- |
| 81.41 | 0.42 | 7.99 | -- | -- | 1.44 | -- | -- | -0.0688 | -- | 19.35 | 47520 | -- | -- |
| 169.86 | 0.608 | 7.9 | -- | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 55.97 | temperature | 25 | 270 | < th | dose dependent | rect. | 23 | 22 |
| 3 | 56.45 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 8 |
| 6 | 56.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 7 | 56.55 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 4 |
| 31 | 56.89 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 51 | 57.11 | temperature | 30 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 60 | 57.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 9 | 20 |
| 67 | 57.26 | temperature | 30 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 75 | 57.31 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 81 | 57.35 | temperature | 30 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 86 | 57.36 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 91 | 57.39 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 113 | 57.54 | temperature | 25 | 1440 | < th | dose dependent | rect. | 16 | 20 |
| 147 | 57.72 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 23 |
| 173 | 57.82 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 181 | 57.85 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 203 | 57.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 215 | 57.97 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 236 | 58.08 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 295 | 58.42 | temperature | 30 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 303 | 58.51 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 352 | 58.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 7 |
| 354 | 58.81 | temperature | 25 | 270 | < th | dose dependent | rect. | 17 | 23 |
| 361 | 58.85 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 427 | 59.17 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 8 |
| 435 | 59.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 5 |
| 440 | 59.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 2 |
| 586 | 59.55 | temperature | 30 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 628 | 59.71 | temperature | 30 | 90 | < th | dose dependent | sin | 7 | NA |
| 633 | 59.73 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 689 | 59.88 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 750 | 60.07 | temperature | 10 | 90 | > th | dose dependent | sin | 7 | NA |
| 768 | 60.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 814 | 60.25 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 848 | 60.37 | temperature | 30 | 10 | < th | dose dependent | sin | 6 | NA |
| 855 | 60.39 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 22 |
| 870 | 60.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 886 | 60.47 | temperature | 10 | 1440 | > th | dose dependent | sin | 11 | NA |
| 957 | 60.66 | temperature | 20 | 4320 | < th | dose independent | rect. | 19 | 5 |
| 984 | 60.72 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 3 |
| 1000 | 60.75 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |