Os12g0585200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os12g0585200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 201.9 | 0.668 | 6.11 | 0.422 | 1.06 | -0.792 | 0.428 | -1.43 | -0.405 | 15.8 | 21.4 | 732 | -- | -- |
| 207.76 | 0.671 | 6.07 | 0.768 | 1.08 | -0.69 | 0.463 | -- | -0.335 | 15.7 | 21.33 | 630 | -- | -- |
| 202.38 | 0.663 | 6.1 | 0.431 | 1.06 | -0.796 | -- | -1.44 | -0.402 | 15.8 | 21.4 | 751 | -- | -- |
| 208.27 | 0.672 | 6.06 | 0.788 | 1.08 | -0.705 | -- | -- | -0.324 | 15.8 | 21.32 | 630 | -- | -- |
| 260.26 | 0.751 | 6.1 | 0.369 | -- | -0.836 | -- | -1.54 | -0.397 | -- | 21.6 | 912 | -- | -- |
| 225.8 | 0.704 | 6.1 | 0.53 | 1.05 | -- | 0.506 | -- | -0.522 | 15.2 | -- | -- | -- | -- |
| 226.54 | 0.705 | 6.1 | 0.54 | 1.05 | -- | -- | -- | -0.519 | 15.3 | -- | -- | -- | -- |
| 266.92 | 0.761 | 6.05 | 0.798 | -- | -0.77 | -- | -- | -0.311 | -- | 21.78 | 981 | -- | -- |
| 223.05 | 0.696 | 6.09 | -- | 1.08 | -0.469 | -- | -- | -0.441 | 15.6 | 22.18 | 551 | -- | -- |
| 289.04 | 0.794 | 6.1 | 0.496 | -- | -- | -- | -- | -0.546 | -- | -- | -- | -- | -- |
| 234.24 | 0.716 | 6.12 | -- | 1.04 | -- | -- | -- | -0.579 | 15.3 | -- | -- | -- | -- |
| 280.86 | 0.781 | 6.08 | -- | -- | -0.551 | -- | -- | -0.435 | -- | 22.24 | 910 | -- | -- |
| 295.53 | 0.802 | 6.12 | -- | -- | -- | -- | -- | -0.601 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 195.91 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 24 | 6 |
| 9 | 197.33 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 1 | 12 |
| 18 | 198.30 | temperature | 10.0 | 270 | > th | dose dependent | sin | 5 | NA |
| 40 | 199.81 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 8 |
| 42 | 199.89 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 5 | 6 |
| 43 | 199.94 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 6 | 3 |
| 48 | 200.16 | temperature | 25.0 | 270 | < th | dose dependent | rect. | 7 | 1 |
| 59 | 200.86 | temperature | 20.0 | 720 | > th | dose independent | rect. | 24 | 5 |
| 83 | 201.72 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 11 |
| 97 | 202.13 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 8 |
| 104 | 202.19 | temperature | 20.0 | 270 | > th | dose independent | rect. | 1 | 14 |
| 108 | 202.26 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 4 | 1 |
| 120 | 202.42 | temperature | 10.0 | 720 | > th | dose dependent | sin | 9 | NA |
| 139 | 202.72 | temperature | 20.0 | 720 | > th | dose independent | rect. | 21 | 15 |
| 147 | 202.81 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 10 |
| 151 | 202.85 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 17 |
| 154 | 202.86 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 167 | 203.08 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 171 | 203.12 | temperature | 20.0 | 720 | > th | dose independent | sin | 9 | NA |
| 176 | 203.16 | temperature | 20.0 | 720 | > th | dose independent | rect. | 23 | 13 |
| 193 | 203.43 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 8 | 12 |
| 205 | 203.60 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 21 | 15 |
| 223 | 203.75 | temperature | 15.0 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 230 | 203.84 | humidity | 70.0 | 14400 | > th | dose dependent | rect. | 3 | 4 |
| 240 | 203.88 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 19 | 12 |
| 243 | 203.91 | radiation | 1.0 | 720 | > th | dose independent | rect. | 14 | 3 |
| 283 | 204.17 | temperature | 25.0 | 270 | < th | dose independent | rect. | 6 | 4 |
| 285 | 204.19 | temperature | 25.0 | 270 | < th | dose independent | rect. | 7 | 2 |
| 310 | 204.35 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 3 | 5 |
| 315 | 204.36 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 7 |
| 334 | 204.46 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 2 | 9 |
| 350 | 204.54 | temperature | 20.0 | 270 | > th | dose independent | sin | 5 | NA |
| 353 | 204.56 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 385 | 204.76 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 19 | 9 |
| 399 | 204.85 | radiation | 1.0 | 720 | > th | dose independent | rect. | 14 | 15 |
| 400 | 204.85 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 19 |
| 457 | 205.14 | temperature | 25.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 537 | 205.52 | temperature | 30.0 | 270 | < th | dose dependent | sin | 5 | NA |
| 542 | 205.55 | temperature | 15.0 | 1440 | > th | dose independent | rect. | 10 | 10 |
| 566 | 205.65 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 580 | 205.73 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 17 | 21 |
| 605 | 205.91 | humidity | 70.0 | 30 | > th | dose dependent | rect. | 19 | 14 |
| 632 | 206.05 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 24 | 7 |
| 637 | 206.07 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 9 | 2 |
| 691 | 206.38 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 3 | 15 |
| 726 | 206.58 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 19 |
| 768 | 206.76 | radiation | 1.0 | 720 | < th | dose independent | rect. | 11 | 11 |
| 781 | 206.81 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 17 | 14 |
| 786 | 206.82 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 20 | 7 |
| 788 | 206.83 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 16 |
| 792 | 206.86 | temperature | 20.0 | 720 | > th | dose independent | rect. | 2 | 20 |
| 845 | 207.03 | atmosphere | 1000.0 | 1440 | < th | dose dependent | rect. | 10 | 1 |
| 857 | 207.07 | radiation | 1.0 | 270 | < th | dose independent | rect. | 11 | 19 |
| 871 | 207.11 | radiation | 10.0 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 884 | 207.17 | wind | 5.0 | 90 | < th | dose independent | rect. | 14 | 13 |
| 911 | 207.29 | radiation | 1.0 | 720 | < th | dose independent | sin | 18 | NA |
| 934 | 207.37 | radiation | 1.0 | 720 | > th | dose independent | sin | 16 | NA |
| 945 | 207.41 | temperature | 20.0 | 720 | < th | dose independent | rect. | 20 | 11 |
| 993 | 207.56 | wind | 7.0 | 270 | < th | dose independent | rect. | 14 | 11 |