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Os11g0594600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF295 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.82 (0.0318) R2 : 0.83
β1 : 2.23 (0.116) R2dD : 0.142 R2D : 0.121
β2 : 3.58 (0.0825) R2dC : 0.707 R2C : 0.69
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.336 (0.0679) R2dN8 : 0.0122 R2N8 : -0.0119
σ : 0.598
deviance : 163.14
__
_____
C
peak time of C : 19
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
153.58 0.582 6.81 2.46 3.59 0.15 -0.36 -2.79 0.389 19 80 1148 -- --
162.34 0.593 6.81 2.22 3.61 0.219 -0.2 -- 0.386 19 79.48 3550 -- --
153.34 0.577 6.82 2.43 3.59 0.185 -- -2.61 0.375 19 82.19 1132 -- --
161.94 0.593 6.8 2.21 3.61 0.265 -- -- 0.419 19 83.03 3574 -- --
479.92 1.02 6.64 2.82 -- -2.38 -- -2.14 0.555 -- 79 518 -- --
163.06 0.599 6.82 2.23 3.58 -- -0.174 -- 0.337 19 -- -- -- --
163.14 0.598 6.82 2.23 3.58 -- -- -- 0.336 19 -- -- -- --
452.55 0.991 6.75 2.18 -- -2.63 -- -- 0.19 -- 79 519 -- --
283.62 0.784 6.8 -- 3.64 0.947 -- -- 0.431 19.1 87.83 3610 -- --
838.02 1.35 6.74 2.16 -- -- -- -- 0.27 -- -- -- -- --
294.52 0.803 6.88 -- 3.56 -- -- -- 0.0876 19 -- -- -- --
560.29 1.1 6.8 -- -- -2.84 -- -- 0.0347 -- 77.18 572 -- --
961.04 1.45 6.8 -- -- -- -- -- 0.0303 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 142.81 temperature 30.0 90 < th dose dependent rect. 23 7
7 143.94 atmosphere 1010.0 270 < th dose independent rect. 14 9
9 145.26 atmosphere 995.0 30 > th dose dependent rect. 23 7
18 145.84 temperature 10.0 90 > th dose dependent rect. 19 14
19 145.93 temperature 15.0 1440 > th dose independent rect. 7 16
23 146.15 temperature 15.0 270 > th dose independent rect. 17 16
28 146.30 wind 7.0 270 < th dose independent rect. 9 19
31 146.44 atmosphere 1000.0 30 > th dose independent rect. 23 7
35 146.60 wind 7.0 270 < th dose independent rect. 9 8
41 146.80 temperature 15.0 270 > th dose independent rect. 14 9
42 146.82 temperature 20.0 270 > th dose independent rect. 4 5
43 146.83 wind 7.0 270 < th dose independent rect. 10 17
46 146.95 radiation 30.0 1440 < th dose independent rect. 24 7
49 146.97 temperature 10.0 270 > th dose dependent rect. 8 8
59 147.25 humidity 90.0 90 < th dose independent rect. 16 17
62 147.33 wind 9.0 270 < th dose dependent rect. 9 8
65 147.43 radiation 40.0 270 < th dose independent rect. 4 17
67 147.49 wind 5.0 30 < th dose independent rect. 23 7
79 147.83 temperature 10.0 90 > th dose dependent rect. 9 10
88 147.99 temperature 15.0 90 > th dose independent rect. 19 14
92 148.06 radiation 40.0 10 < th dose dependent rect. 23 7
95 148.09 radiation 40.0 90 < th dose independent rect. 6 17
100 148.13 radiation 1.0 90 < th dose independent rect. 22 8
101 148.14 wind 9.0 30 < th dose independent rect. 23 7
102 148.14 humidity 90.0 90 < th dose independent rect. 2 7
103 148.15 temperature 10.0 30 > th dose independent rect. 23 7
104 148.15 temperature 30.0 30 < th dose independent rect. 23 7
105 148.15 humidity 50.0 30 > th dose independent rect. 23 7
109 148.15 radiation 20.0 30 < th dose independent rect. 23 7
112 148.15 temperature 10.0 30 > th dose independent rect. 6 17
114 148.15 atmosphere 1015.0 30 < th dose independent rect. 6 17
115 148.16 temperature 10.0 1440 > th dose independent rect. 24 7
118 148.16 temperature 30.0 1440 < th dose independent rect. 24 7
122 148.16 humidity 50.0 1440 > th dose independent rect. 24 7
127 148.16 atmosphere 995.0 1440 > th dose independent rect. 24 7
149 148.19 wind 7.0 90 < th dose independent rect. 9 21
155 148.27 temperature 20.0 270 > th dose independent rect. 4 18
157 148.31 atmosphere 995.0 30 > th dose dependent rect. 6 17
162 148.34 humidity 50.0 90 > th dose dependent rect. 22 8
165 148.37 atmosphere 1010.0 270 < th dose independent rect. 17 15
183 148.45 humidity 90.0 90 < th dose independent rect. 19 14
187 148.49 atmosphere 1015.0 270 < th dose dependent rect. 15 8
233 148.58 atmosphere 995.0 30 > th dose independent rect. 6 17
237 148.62 atmosphere 1010.0 90 < th dose independent rect. 19 14
246 148.68 precipitation 0.1 30 < th dose independent rect. 23 7
247 148.68 precipitation 0.1 30 < th dose dependent rect. 23 7
273 148.79 wind 1.0 30 > th dose independent rect. 6 17
281 148.81 precipitation 0.1 30 < th dose independent rect. 6 17
283 148.81 precipitation 0.1 30 < th dose dependent rect. 6 17
288 148.86 humidity 90.0 30 < th dose independent rect. 6 3
289 148.86 atmosphere 1005.0 90 > th dose dependent rect. 24 9
292 148.89 humidity 80.0 270 > th dose independent rect. 4 5
296 148.91 atmosphere 1000.0 90 > th dose dependent rect. 6 3
304 148.96 radiation 20.0 10 < th dose dependent sin 9 NA
315 149.07 temperature 15.0 1440 > th dose independent rect. 7 7
319 149.09 wind 9.0 30 < th dose independent rect. 6 17
342 149.18 radiation 1.0 30 > th dose dependent rect. 6 3
345 149.19 temperature 20.0 90 > th dose dependent rect. 5 4
353 149.23 humidity 60.0 10 > th dose independent rect. 6 17
365 149.27 humidity 90.0 90 < th dose dependent rect. 19 14
366 149.30 radiation 40.0 270 < th dose independent rect. 3 8
405 149.46 wind 7.0 270 < th dose independent rect. 22 16
411 149.50 atmosphere 1015.0 270 < th dose independent rect. 4 17
412 149.50 humidity 90.0 10 < th dose dependent rect. 6 3
414 149.50 radiation 1.0 90 < th dose dependent rect. 22 17
430 149.55 radiation 1.0 90 < th dose dependent rect. 22 12
436 149.58 radiation 1.0 90 < th dose dependent rect. 22 14
446 149.62 temperature 20.0 10 > th dose independent rect. 5 19
460 149.70 wind 9.0 270 < th dose dependent rect. 9 19
464 149.72 humidity 90.0 270 < th dose independent rect. 9 7
499 149.83 temperature 20.0 10 > th dose independent rect. 5 7
511 149.86 temperature 30.0 90 < th dose independent rect. 6 16
529 149.93 radiation 1.0 30 > th dose dependent rect. 18 15
547 149.96 humidity 50.0 270 > th dose dependent rect. 20 8
560 150.01 wind 9.0 90 < th dose dependent rect. 22 8
562 150.02 temperature 20.0 10 > th dose dependent rect. 5 4
564 150.03 wind 1.0 90 > th dose independent rect. 23 7
591 150.06 precipitation 0.1 270 < th dose independent rect. 9 19
592 150.06 precipitation 0.1 270 < th dose dependent rect. 9 19
602 150.10 humidity 50.0 270 > th dose independent rect. 15 18
609 150.13 wind 9.0 10 < th dose dependent rect. 23 7
630 150.21 wind 7.0 10 < th dose independent rect. 12 17
652 150.26 radiation 1.0 90 < th dose independent rect. 22 17
668 150.32 temperature 15.0 270 > th dose independent rect. 8 9
670 150.32 radiation 1.0 90 < th dose independent rect. 22 12
675 150.34 radiation 1.0 90 < th dose independent rect. 22 15
678 150.35 temperature 15.0 270 > th dose independent rect. 9 7
690 150.36 wind 9.0 270 < th dose dependent rect. 10 17
721 150.47 radiation 30.0 270 < th dose independent rect. 4 5
723 150.48 wind 9.0 270 < th dose independent rect. 4 5
725 150.48 temperature 10.0 270 > th dose independent rect. 4 5
727 150.48 humidity 50.0 270 > th dose independent rect. 4 5
728 150.48 atmosphere 995.0 270 > th dose independent rect. 4 5
729 150.48 atmosphere 1015.0 270 < th dose independent rect. 4 5
731 150.48 temperature 10.0 270 > th dose independent rect. 9 19
743 150.51 radiation 1.0 270 > th dose independent rect. 8 9
749 150.54 radiation 40.0 270 < th dose dependent rect. 4 17
770 150.61 radiation 10.0 90 > th dose independent rect. 6 2
790 150.64 wind 5.0 30 < th dose independent rect. 6 3
792 150.64 temperature 30.0 270 < th dose independent rect. 4 16
818 150.67 temperature 30.0 270 < th dose independent rect. 4 5
834 150.70 humidity 50.0 30 > th dose dependent rect. 6 17
835 150.71 precipitation 0.1 270 < th dose independent rect. 4 5
838 150.71 precipitation 0.1 270 < th dose dependent rect. 4 5
863 150.80 temperature 10.0 1440 > th dose independent rect. 7 3
866 150.80 atmosphere 1005.0 90 > th dose independent rect. 6 3
867 150.80 atmosphere 995.0 1440 > th dose independent rect. 7 3
868 150.80 atmosphere 1015.0 1440 < th dose independent rect. 7 3
870 150.80 precipitation 0.1 270 < th dose independent rect. 9 7
874 150.80 temperature 10.0 1440 > th dose independent rect. 10 21
879 150.80 precipitation 0.1 270 < th dose dependent rect. 9 7
880 150.81 wind 1.0 30 > th dose independent rect. 6 3
901 150.86 wind 9.0 1440 < th dose independent rect. 24 7
908 150.86 humidity 90.0 90 < th dose dependent rect. 21 12
910 150.87 wind 9.0 270 < th dose dependent rect. 4 5
933 150.89 precipitation 0.1 270 < th dose independent rect. 10 17
935 150.89 precipitation 0.1 270 < th dose dependent rect. 10 17
947 150.91 temperature 25.0 10 > th dose dependent rect. 21 12
955 150.93 temperature 30.0 10 < th dose dependent rect. 23 12
958 150.94 humidity 80.0 270 > th dose independent rect. 4 15
961 150.95 atmosphere 1015.0 270 < th dose independent rect. 9 7
975 150.99 temperature 10.0 30 > th dose independent rect. 6 3
977 150.99 temperature 30.0 30 < th dose independent rect. 6 3
978 150.99 humidity 50.0 30 > th dose independent rect. 6 3
980 150.99 atmosphere 995.0 30 > th dose independent rect. 6 3
981 150.99 atmosphere 1015.0 30 < th dose independent rect. 6 3
984 150.99 temperature 10.0 30 > th dose independent rect. 9 21
985 150.99 radiation 1.0 270 < th dose dependent rect. 20 11
987 151.00 precipitation 0.1 270 < th dose independent rect. 8 9
991 151.00 precipitation 0.1 270 < th dose dependent rect. 8 9