BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os11g0594600 Os11g0594600|Os11g0594600
(416 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os11g0594600 Protein of unknown function DUF295 family protein 800 0.0
Os04g0329500 Protein of unknown function DUF295 family protein 273 2e-73
Os04g0317300 Protein of unknown function DUF295 family protein 264 1e-70
Os11g0595100 Protein of unknown function DUF295 family protein 259 2e-69
Os04g0316800 Protein of unknown function DUF295 family protein 244 7e-65
Os11g0594500 234 9e-62
Os11g0594900 165 7e-41
Os08g0293200 Conserved hypothetical protein 161 1e-39
Os06g0148600 Protein of unknown function DUF295 family protein 100 2e-21
Os02g0159800 Cyclin-like F-box domain containing protein 80 4e-15
>Os11g0594600 Protein of unknown function DUF295 family protein
Length = 416
Score = 800 bits (2066), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/416 (94%), Positives = 392/416 (94%)
Query: 1 MDSGKGTIGREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXX 60
MDSGKGTIGREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQ
Sbjct: 1 MDSGKGTIGREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQAWRAAARLHRPPPP 60
Query: 61 XXXXXXXXXXFSGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARY 120
FSGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARY
Sbjct: 61 LPLLVLSNLAFSGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARY 120
Query: 121 LGDGACFLVNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCK 180
LGDGACFLVNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCK
Sbjct: 121 LGDGACFLVNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCK 180
Query: 181 VILSSPPGSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYI 240
VILSSPPGSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYI
Sbjct: 181 VILSSPPGSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYI 240
Query: 241 LSKLTTNLFAFEITEDDCGMMVSRVERCVTELPQVKDSYGQRWNMVEWHGKLLLVVRYIG 300
LSKLTTNLFAFEITEDDCGMMVSRVERCVTELPQVKDSYGQRWNMVEWHGKLLLVVRYIG
Sbjct: 241 LSKLTTNLFAFEITEDDCGMMVSRVERCVTELPQVKDSYGQRWNMVEWHGKLLLVVRYIG 300
Query: 301 GSEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVY 360
GSEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVY
Sbjct: 301 GSEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVY 360
Query: 361 FIDGYLFPAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE 416
FIDGYLFPAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE
Sbjct: 361 FIDGYLFPAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE 416
>Os04g0329500 Protein of unknown function DUF295 family protein
Length = 467
Score = 273 bits (697), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 165/409 (40%), Positives = 220/409 (53%), Gaps = 19/409 (4%)
Query: 17 WADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXXXXXXXFSGFCV 76
WA + DI+G+V+ LP + DRAR+RSVC+ FS
Sbjct: 69 WAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPGFKFSSLSD 128
Query: 77 DGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKAR-----YLGDGACFLVNP 131
G + R +P+P EV AA DLRCVG +GWL V K R DG CFLVN
Sbjct: 129 KGDLMPVRCVPVPKEV---AADDLRCVGYFDGWLVGVTPNKDRSDEYNRDADGDCFLVNV 185
Query: 132 FSREVVNLPPPFVSTHLVDVYT-RSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSG 190
FSR+V+ LP + Y+ ++L IINGSG V ++ Y MS C V LS+ P S
Sbjct: 186 FSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDI-YTMSLCNVALSASPDSR 244
Query: 191 SAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLTTNLFA 250
Y VAA S H+ +KLALW+PGM SW IC G I D+ FY GK Y+L + LFA
Sbjct: 245 GKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFA 304
Query: 251 FEITEDDCGMMVSRVERCVTELPQVKDSYGQ---RWNMVEWHGKLLLVVRYIGGSEGWHN 307
FE+ ED+ G+MVSRV+RC++ LP G NMV W G+LLL++R+ +
Sbjct: 305 FEVGEDNGGLMVSRVKRCLSALPLHHPYQGGGAISCNMVVWRGELLLIIRHYSDNYRDRE 364
Query: 308 ICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVYFIDGYLF 367
+ KV VF +DV+TNP+ TEI+SL+GDCIF+ SF A + G+E D +YF+
Sbjct: 365 VLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFV----- 419
Query: 368 PAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE 416
+ P+D FVY+MRD + FA + +F P W P+E
Sbjct: 420 -PDDWKPYDTFVYSMRDGKMRSFAVKLLASDFDVDQLSRDFPVWLLPTE 467
>Os04g0317300 Protein of unknown function DUF295 family protein
Length = 445
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 158/377 (41%), Positives = 210/377 (55%), Gaps = 19/377 (5%)
Query: 17 WADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXXXXXXXFSGFCV 76
WA + DI+G+V+ LP + DRAR+RSVC+ FS
Sbjct: 69 WAGLQPDILGIVLHFLPCLADRARMRSVCRHWRASANGHVLPPPLPLLMLPGFKFSSLSD 128
Query: 77 DGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKAR-----YLGDGACFLVNP 131
G + R +P+P EV AA DLRCVGS GWL V K R DG CFLVN
Sbjct: 129 KGDLMPVRCVPVPKEV---AADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNV 185
Query: 132 FSREVVNLPPPFVSTHLVDVYT-RSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSG 190
FSR+V+ LP + Y+ ++L IINGSG V ++ Y MS C V LS+ P S
Sbjct: 186 FSRKVIRLPQLCHMRYNFPAYSSKTLRIINGSGEVYFRVNDI-YTMSLCNVALSASPDSR 244
Query: 191 SAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLTTNLFA 250
Y VAA S H+ +KLALW+PGM SW IC G I D+ FY GK Y+L + LFA
Sbjct: 245 GKYIVAASSDHKCASKLALWQPGMISWHICAGVDIDGPRDLTFYLGKLYVLQRYKIRLFA 304
Query: 251 FEITEDDCGMMVSRVERCVTELP---QVKDSYGQRWNMVEWHGKLLLVVRYIGGSEGWHN 307
FE+ ED+ G+MVSRV+RC++ LP ++ NMV W G+LLL++R+ +
Sbjct: 305 FEVGEDNGGLMVSRVKRCLSALPLHHPYQEGGAISCNMVVWRGELLLIIRHYSDNYRDRE 364
Query: 308 ICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVYFIDGYLF 367
+ KV VF +DV+TNP+ TEI+SL+GDCIF+ SF A + G+E D +YF+
Sbjct: 365 VLKVEVFALDVNTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFV----- 419
Query: 368 PAKNGPPFDRFVYNMRD 384
+ P+D FVY+MRD
Sbjct: 420 -PDDWKPYDTFVYSMRD 435
>Os11g0595100 Protein of unknown function DUF295 family protein
Length = 408
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 162/414 (39%), Positives = 217/414 (52%), Gaps = 22/414 (5%)
Query: 9 GREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXXXXX 68
G R W DIPAD++G+V+ +P DRAR+RSVC+
Sbjct: 7 GDALPRERWNDIPADMLGLVLRVIPCAADRARVRSVCRSWRAAAAIQRPPPPLPVLVFSR 66
Query: 69 XXFSGFC-VDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACF 127
F+ + AM+ T+ P +R VGS + WL + + DG CF
Sbjct: 67 FSFASLSRLSPAMAFTK----PRRFFFHKDVTIRWVGSFDEWLVGTKPSRECKDADGHCF 122
Query: 128 LVNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPP 187
L+N SR+ + LP P + H D + ++LPI+N SG VD IH +Y M F KV+LS+ P
Sbjct: 123 LLNLMSRKKIQLPRP-CALHFFDYFCKTLPIVNTSGWVDIIIHDREYSMCFRKVVLSASP 181
Query: 188 GSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLT-- 245
S S VAAIS LALW PGM SWC+C I +D+AFYQG+ Y+ T
Sbjct: 182 ASDSMCIVAAIS----SRTLALWHPGMRSWCVCRSFGIDGSADIAFYQGRIYMAMVSTYF 237
Query: 246 ---TNLFAFEITEDDCGMMVSRVERCVTE-LPQVKDSYGQRWNMVEWHGKLLLVVRYIGG 301
++ F++ E + +MVS VE+CVTE LP V+ + +VEW GKLLL+V Y
Sbjct: 238 PHILSILFFQLEEVNGRVMVSYVEQCVTETLPPVEGCVVNEFYIVEWRGKLLLIVMY--A 295
Query: 302 SEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVYF 361
W + K+ ++ +D STNP TEIN+LDGDC+FIS SS SF ACQYDG + D VYF
Sbjct: 296 EHVWLDTEKIGIYALDFSTNPHSLTEINNLDGDCLFISLRSSKSFPACQYDGAKGDFVYF 355
Query: 362 IDGYLFPAKN-GPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFP 414
+ GY A FD VYN+RD T + +DN L+ W FP
Sbjct: 356 VSGYWQHATGVHHSFDVLVYNVRDATTTRLSVSAPEDNSGPFTNNLL---WLFP 406
>Os04g0316800 Protein of unknown function DUF295 family protein
Length = 1316
Score = 244 bits (624), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 154/377 (40%), Positives = 203/377 (53%), Gaps = 29/377 (7%)
Query: 17 WADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXXXXXXXFSGFCV 76
WA + DI+G+V+ LP + DRAR+R+ FS
Sbjct: 60 WAGLQPDILGIVLHFLPCLADRARVRA---------NGHVLPPPLPLLVLPGFKFSSLSD 110
Query: 77 DGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKAR-----YLGDGACFLVNP 131
G R +P+P EV AA DLRCVGS GWL V K R DG CFLVN
Sbjct: 111 KGDFMPVRCVPVPKEV---AADDLRCVGSFHGWLVGVTPNKDRSDEYNRDADGDCFLVNV 167
Query: 132 FSREVVNLPPPFVSTHLVDVYT-RSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSG 190
FSR+V+ LP + Y+ ++L I+NGSG V ++ Y MS C V LS+ P S
Sbjct: 168 FSRKVIRLPQLCHMRYNFPAYSSKTLRIVNGSGEVHFGVNDI-YTMSLCNVALSASPES- 225
Query: 191 SAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLTTNLFA 250
S Y VAA S H+ ALW+PGM SW +C G I D++FYQGK Y+L + T LF
Sbjct: 226 SKYIVAASSDHKGAPVPALWQPGMISWQVCSGVEIDGPRDLSFYQGKLYMLMRHRTRLFT 285
Query: 251 FEITEDDCGMMVSRVERCVTELPQ---VKDSYGQRWNMVEWHGKLLLVVRYIGGSEGWHN 307
E+ EDD G MVSR+E +TELP+ ++ NMV W G+LLL++R+ G
Sbjct: 286 CELEEDDRGFMVSRIELSLTELPRNHPYQEGGAISCNMVVWRGELLLIIRHYNGDYRKRQ 345
Query: 308 ICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVYFIDGYLF 367
+ KV VF +DV TNP+ TEI+SL+GDCIF+ SF A + G+E D +YF+
Sbjct: 346 LHKVEVFALDVDTNPYGLTEIHSLNGDCIFVGLGGCKSFPAGLHHGVEGDHIYFV----- 400
Query: 368 PAKNGPPFDRFVYNMRD 384
+ P+D FVY+MRD
Sbjct: 401 -PDDWRPYDTFVYSMRD 416
>Os11g0594500
Length = 433
Score = 234 bits (597), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 166/444 (37%), Positives = 223/444 (50%), Gaps = 39/444 (8%)
Query: 1 MDSGKGTIGREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQXX----XXXXXXXX 56
M +G GT G + S D+P I+G V+ RL S DRA LRSV +
Sbjct: 1 MATGTGT-GAVSGPPSSLDLPLGIVGAVLRRLHSSADRAALRSVFRRSWRAGARDYPPLV 59
Query: 57 XXXXXXXXXXXXXXFSGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQK 116
+ DGA + R+PL ++ A +C+G E WL +
Sbjct: 60 LAPPLPLVLYPNFALASVFSDGAAAAGHRVPLLAALLDGAFPG-QCIGCFEDWLVCTWLR 118
Query: 117 KARYL-----GDGACFLVNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHA 171
+ L DG C LVNPFS E V+LP P +TH RS+P+ NG G V CTIHA
Sbjct: 119 LSIPLYPTVGADGGCVLVNPFSGEKVSLPSP-TATHSCGAIQRSVPVSNGDGEVVCTIHA 177
Query: 172 AQYVMSFCKVILSSPPGSGSAYT------------VAAISVHRNGAKLALWRPGMTSWCI 219
+Y M+ K +LS+PP +GS+ + VAA+S + KLA P SWCI
Sbjct: 178 DEYAMALYKAVLSAPPNAGSSSSSSSELDLGSSCIVAAVSQRKGEYKLAFCTPETPSWCI 237
Query: 220 CYGGCISKFSDVAFYQGKFYILSKLTTNLFAFEI-TEDDCGMMVSRVERCVTE-LPQVKD 277
C G CI D+ FY GK Y++ +LFAFE+ D +VS VERC+ E LP +D
Sbjct: 238 CEGNCIKSHIDIEFYLGKLYMVDTRNGDLFAFELEAHDHVFPVVSLVERCLIEKLPSAED 297
Query: 278 SYGQRWNMVEWHGKLLLVVRYIGGSEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIF 337
Q +N+V+ GKLLL+VRY E W V VF + ++NP+++ E SLDG+ IF
Sbjct: 298 GDRQTYNLVQSLGKLLLLVRYF--RESWDQFVGVRVFELSFNSNPWKWIEKKSLDGESIF 355
Query: 338 ISPCSSMSFLACQYDGIEDDLVYFIDGYLFPAKNGPPFDRF-----VYNMRDCTLAPFAA 392
IS + SF A QY+ IEDD +YF+D L P N D + VYNMRD T++PF
Sbjct: 356 ISSSCNKSFAASQYEEIEDDRIYFLDS-LCPKFNPKKSDSYSYCSQVYNMRDGTISPFLI 414
Query: 393 DISDDNFRAPDGRLMSPTWFFPSE 416
+ L P WF P++
Sbjct: 415 GTGPMS-----NYLGFPMWFCPTQ 433
>Os11g0594900
Length = 404
Score = 165 bits (417), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 184/417 (44%), Gaps = 78/417 (18%)
Query: 9 GREAQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXX-----XXXXXXXX 63
G R W D+P D++G+V+G +P RAR+RSVC
Sbjct: 57 GDALLRGPWNDLPGDLLGLVLGHIPCAAGRARVRSVCSSWRNAAAIQRPPRPLPMLVFSR 116
Query: 64 XXXXXXXFSGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGD 123
+ A +E RIPL + LR VGS + WL R
Sbjct: 117 FGFVSFSSFSSVMVIADAEFTRIPLHED------ESLRWVGSFDEWLVGTRPGSVCKDAH 170
Query: 124 GACFLVNPFSREVVNLPPP--FVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKV 181
CFLVN FSRE + LP P F +H + ++LPI+N +G VD +
Sbjct: 171 SHCFLVNAFSRETIQLPRPSAFRLSHHI---CKTLPIVNTTGSVD--------------I 213
Query: 182 ILSSPPGSGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYIL 241
I+ SG Y A ++ + P +IL
Sbjct: 214 IIQEHEYSGRIYM----------AMVSTYFP--------------------------HIL 237
Query: 242 SKLTTNLFAFEITEDDCGMMVSRVERCVTE-LPQVKDSYGQRWNMVEWHGKLLLVVRYIG 300
S + F++ E D +MVS VERCVT+ LP V+ +++VEW GKLLL+V Y
Sbjct: 238 S-----IMFFQLEEVDGRVMVSYVERCVTQTLPPVEGCAVNEFHIVEWRGKLLLIVMY-- 290
Query: 301 GSEGWHNICKVSVFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQYDGIEDDLVY 360
W ++ ++ +D STNP+ TEIN+LDGDC+FIS SS SF ACQYDG + D VY
Sbjct: 291 ADHVWVENRRIGIYALDFSTNPYSLTEINNLDGDCLFISSRSSKSFPACQYDGAKGDFVY 350
Query: 361 FIDGYLFPAKN-GPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPTWFFPSE 416
F+ + FD V+N+RD T A F + DN D + + W FP +
Sbjct: 351 FVSSFRQQTIGVHHSFDILVFNVRDATTAVFPVLVPGDN---SDPFMDNLLWLFPPK 404
>Os08g0293200 Conserved hypothetical protein
Length = 189
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/179 (50%), Positives = 111/179 (62%), Gaps = 2/179 (1%)
Query: 71 FSGFCVDGAMSETR-RIPLPV-EVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACFL 128
FS FC + R R+PLP E AA G + CVGS EGWL V+ K RY GD FL
Sbjct: 6 FSSFCAGETIMGVRGRVPLPEREREMAAGGSVCCVGSFEGWLVGVKANKGRYFGDRRRFL 65
Query: 129 VNPFSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPG 188
+N FSR+V+ LP P ++ D YTRSLPIINGSGV+ CTI+AA+ VM F KV+LSS P
Sbjct: 66 MNSFSRDVIRLPLPSGASRSADAYTRSLPIINGSGVLHCTINAAKCVMLFWKVVLSSSPD 125
Query: 189 SGSAYTVAAISVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKFYILSKLTTN 247
SGS VAA S+ ++ KLALWRPGM SW +C G I + D+ F K ++ N
Sbjct: 126 SGSKCVVAATSMVKDAVKLALWRPGMKSWSVCDGDTIIRSIDIVFCHAKGTSTCSVSAN 184
>Os06g0148600 Protein of unknown function DUF295 family protein
Length = 393
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 169/426 (39%), Gaps = 61/426 (14%)
Query: 12 AQRRSWADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXXXXXXXF 71
Q SWAD+ DI+G+V+ RLPS+ DR RLR+VC+ F
Sbjct: 5 TQSSSWADLQMDILGLVLRRLPSLADRVRLRAVCRPWRSNAQLLTLPPPFPWLNLLDGTF 64
Query: 72 SGFCVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACFLVNP 131
DG E R+PLP D C GS + WL + D C L+NP
Sbjct: 65 LSIS-DG---EIHRMPLP--------DDASCYGSIDNWLFLTD-------SDDGCSLMNP 105
Query: 132 FSREVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSGS 191
FS+ + LP L ++ G+ CT F K+ + P S
Sbjct: 106 FSKATLQLP------KLARIWHHE----RGNAYNACT-------RLFYKLAVPLPLDLSS 148
Query: 192 AYTVAAISVH--RNGAKLALWRPGMTSWCICYGGCI-SKFSDVAFYQGKFYILSKLTTNL 248
VA + R+ + R T + I + F D+AF GK Y LS L
Sbjct: 149 DSLVAVLMNDPLRHSVVCIVHRSISTDSFRFHDRPIKNNFYDIAFCGGKLYALS--CGKL 206
Query: 249 FAFEITEDDCGM-MVSRVERCVTELPQVKDSYGQRWN--------MVEWHGKLLLVVRYI 299
F E++E V VE V + P S N +V G+LL V+R +
Sbjct: 207 FTVEMSEVHIEKPKVPHVECIVEDFPTESHSQPCPENHICVTWPYLVASGGRLLNVIRLV 266
Query: 300 G---GSEGWHNICKVS------VFVMDVSTNPFRFTEINSLDGDCIFISPCSSMSFLACQ 350
G E +I K S V+ D++T + + SL +F+ S S A +
Sbjct: 267 GVPFPPEDDDDIFKDSLTFSFEVYEADLNTGSRMWRRVESLGDQALFVGRHYSKSLSAAE 326
Query: 351 YDGIEDDLVYFIDGYLFPAKNGPPFDRFVYNMRDCTLAPFAADISDDNFRAPDGRLMSPT 410
Y G ++D +YF+ F + P D +YNMR + P + + P G PT
Sbjct: 327 YVGAQEDCIYFMCDDYFRSDEDPLCDAGIYNMRSGVITPLLQENTAPRLH-PTGE-GHPT 384
Query: 411 WFFPSE 416
WFFP++
Sbjct: 385 WFFPAD 390
>Os02g0159800 Cyclin-like F-box domain containing protein
Length = 415
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 115/442 (26%), Positives = 167/442 (37%), Gaps = 91/442 (20%)
Query: 16 SWADIPADIIGVVVGRLPSVEDRARLRSVCQXXXXXXXXXXXXXXXXXXX-XXXXXFSGF 74
SW D+P DI G V+ RLPS DR + C+ F GF
Sbjct: 21 SWRDLPLDIAGEVLRRLPSYADRICFGATCRSWRTSAREHRAPPPLSPCLCFADGSFRGF 80
Query: 75 CVDGAMSETRRIPLPVEVVAAAAGDLRCVGSCEGWLAVVRQKKARYLGDGACFLVNPFSR 134
+ A R LP AAAG L GSC WL R DGA LV+PFS+
Sbjct: 81 FPEDA----RPFRLP-----AAAGWL---GSCGEWLLYRRHD------DGAYLLVDPFSK 122
Query: 135 EVVNLPPPFVSTHLVDVYTRSLPIINGSGVVDCTIHAAQYVMSFCKVILSSPPGSGSAYT 194
P P VS ++ R PI+ VD + + +C+ +G
Sbjct: 123 AAAMAPLPSVSR----LHVRHDPIV----AVD------ERDLRWCRPTWLPRENTGEPQA 168
Query: 195 VAAI----------------SVHRNGAKLALWRPGMTSWCICYGGCISKFSDVAFYQGKF 238
A++ R+G KLA+ RPG +W + G + D AFYQGK
Sbjct: 169 AASLLKLAVSPAADVVAAVVGEGRHG-KLAVCRPGAPAWSVSGGDGWRRIKDTAFYQGKL 227
Query: 239 YILSKLTTNLFAFEITEDDCGMMVSRVERCVTELP-------QVKDSYGQRWNMVEWHGK 291
Y + +L A + D VSR++R + P +V Y +V+ G+
Sbjct: 228 YAVDH-NEDLLAVTLAADGEPPAVSRIDRVINGKPPGAAALLRVTLHY-----LVDSGGE 281
Query: 292 LLLVVRYIGGS-----EGWHNICKV----SVFVMDVSTNPFRFTEI--NSLDGDCIFISP 340
LLLV R + S + W + ++ +VF D + +R + + G +F+
Sbjct: 282 LLLVRREVQRSSMVRTQPWQHTAELQDRFAVFRADFRRSRWRRVKTIGDESGGRALFVGR 341
Query: 341 -CSSMSFLACQYDGIEDDLVYFIDGYLFPAKNGPPFDRFVYNMRDCTLAPFAADISDDNF 399
CS +A D D + + DG D + + C+L N
Sbjct: 342 WCSRAVRVAG--DRWADQVFFLEDGT---------GDEWHTRAQRCSLRGSTFGCVRPNE 390
Query: 400 RAP-----DGRLMSPTWFFPSE 416
P DG+ + TW FP E
Sbjct: 391 LLPLMTTADGQDLDATWIFPRE 412
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.140 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,528,866
Number of extensions: 675734
Number of successful extensions: 1987
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1953
Number of HSP's successfully gapped: 11
Length of query: 416
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 313
Effective length of database: 11,657,759
Effective search space: 3648878567
Effective search space used: 3648878567
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)