Os11g0595100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os11g0595100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 214.65 | 0.688 | 5.93 | 1.54 | 3.12 | 0.94 | 1.53 | -3.9 | 0.0313 | 17.1 | 19.4 | 789 | -- | -- |
| 246.87 | 0.732 | 6.03 | 1.1 | 3.13 | 1.69 | 1.35 | -- | -0.0819 | 17.2 | 19.1 | 716 | -- | -- |
| 220.09 | 0.691 | 5.93 | 1.54 | 3.13 | 0.996 | -- | -3.8 | 0.0424 | 17.1 | 19.4 | 724 | -- | -- |
| 252.58 | 0.74 | 6.02 | 1.07 | 3.15 | 1.72 | -- | -- | -0.0747 | 17.2 | 19.1 | 714 | -- | -- |
| 718.92 | 1.25 | 5.86 | 1.65 | -- | 0.905 | -- | -3.88 | 0.0596 | -- | 20.5 | 1069 | -- | -- |
| 298.7 | 0.81 | 6.08 | 0.483 | 3.1 | -- | 1.52 | -- | -0.342 | 17 | -- | -- | -- | -- |
| 304.38 | 0.817 | 6.07 | 0.486 | 3.1 | -- | -- | -- | -0.334 | 16.9 | -- | -- | -- | -- |
| 734.32 | 1.26 | 5.97 | 1.18 | -- | 2.59 | -- | -- | -0.0921 | -- | 18.53 | 1162 | -- | -- |
| 278.69 | 0.778 | 6.06 | -- | 3.06 | 1.53 | -- | -- | -0.268 | 17.1 | 18.4 | 696 | -- | -- |
| 811.74 | 1.33 | 6.04 | 0.373 | -- | -- | -- | -- | -0.414 | -- | -- | -- | -- | -- |
| 310.61 | 0.824 | 6.08 | -- | 3.1 | -- | -- | -- | -0.388 | 16.9 | -- | -- | -- | -- |
| 762.91 | 1.29 | 6.02 | -- | -- | 1.95 | -- | -- | -0.341 | -- | 18.3 | 1130 | -- | -- |
| 815.4 | 1.33 | 6.05 | -- | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 210.75 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 15 |
| 10 | 211.91 | temperature | 20 | 720 | > th | dose independent | rect. | 12 | 19 |
| 12 | 212.08 | temperature | 20 | 720 | > th | dose independent | rect. | 14 | 17 |
| 21 | 212.67 | temperature | 20 | 720 | < th | dose independent | sin | 11 | NA |
| 68 | 216.14 | temperature | 20 | 720 | > th | dose independent | sin | 13 | NA |
| 140 | 219.88 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 15 |
| 165 | 220.69 | temperature | 20 | 1440 | > th | dose independent | rect. | 21 | 2 |
| 178 | 221.10 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 182 | 221.19 | temperature | 25 | 720 | < th | dose dependent | sin | 12 | NA |
| 183 | 221.20 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 191 | 221.59 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 23 |
| 192 | 221.61 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 23 |
| 200 | 221.83 | radiation | 10 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 202 | 221.88 | humidity | 90 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 206 | 221.99 | temperature | 20 | 720 | > th | dose independent | rect. | 5 | 23 |
| 207 | 222.06 | temperature | 20 | 1440 | < th | dose independent | rect. | 21 | 2 |
| 231 | 222.74 | temperature | 20 | 720 | < th | dose independent | rect. | 24 | 23 |
| 232 | 222.76 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 278 | 224.01 | radiation | 30 | 14400 | < th | dose dependent | rect. | 19 | 10 |
| 279 | 224.02 | temperature | 20 | 720 | < th | dose independent | rect. | 2 | 23 |
| 288 | 224.25 | radiation | 10 | 4320 | < th | dose dependent | rect. | 23 | 6 |
| 296 | 224.40 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 3 |
| 298 | 224.42 | temperature | 20 | 720 | < th | dose independent | rect. | 4 | 23 |
| 302 | 224.55 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 320 | 224.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 16 | 14 |
| 329 | 224.96 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 11 |
| 331 | 225.03 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 4 |
| 353 | 225.41 | humidity | 90 | 14400 | > th | dose independent | sin | 8 | NA |
| 363 | 225.57 | temperature | 10 | 720 | > th | dose dependent | sin | 13 | NA |
| 378 | 225.74 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 17 |
| 414 | 226.20 | humidity | 90 | 14400 | < th | dose independent | sin | 9 | NA |
| 425 | 226.29 | humidity | 90 | 14400 | > th | dose independent | rect. | 14 | 17 |
| 432 | 226.36 | humidity | 90 | 14400 | > th | dose independent | rect. | 17 | 14 |
| 438 | 226.44 | humidity | 90 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 460 | 226.59 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 3 |
| 480 | 226.76 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 18 |
| 516 | 227.08 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 17 |
| 571 | 227.54 | humidity | 90 | 14400 | > th | dose dependent | sin | 5 | NA |
| 592 | 227.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 14 | 17 |
| 596 | 227.69 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 600 | 227.70 | humidity | 80 | 14400 | > th | dose dependent | rect. | 22 | 10 |
| 671 | 228.15 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 723 | 228.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 10 |
| 759 | 228.61 | humidity | 90 | 14400 | > th | dose dependent | rect. | 12 | 20 |
| 880 | 229.19 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 7 |