Os02g0159800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0159800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 154.62 | 0.584 | 3.59 | -0.26 | 0.676 | -1.63 | 0.533 | 1.6 | -0.13 | 17.9 | 13.3 | 516 | -- | -- |
| 156.2 | 0.582 | 3.62 | -0.521 | 0.678 | -1.6 | 0.906 | -- | -0.207 | 18 | 14.39 | 518 | -- | -- |
| 155.2 | 0.58 | 3.58 | -0.204 | 0.672 | -1.62 | -- | 1.99 | -0.114 | 17.9 | 11.78 | 517 | -- | -- |
| 158.07 | 0.586 | 3.62 | -0.538 | 0.676 | -1.57 | -- | -- | -0.204 | 17.9 | 14.1 | 521 | -- | -- |
| 161.77 | 0.592 | 3.58 | -0.261 | -- | -1.3 | -- | 1.19 | -0.146 | -- | 7.234 | 1241 | -- | -- |
| 186.05 | 0.639 | 3.67 | -0.904 | 0.284 | -- | 0.51 | -- | -0.441 | 16.8 | -- | -- | -- | -- |
| 186.71 | 0.64 | 3.66 | -0.901 | 0.287 | -- | -- | -- | -0.439 | 16.5 | -- | -- | -- | -- |
| 162.97 | 0.595 | 3.61 | -0.517 | -- | -1.29 | -- | -- | -0.214 | -- | 12.75 | 1245 | -- | -- |
| 164.97 | 0.598 | 3.6 | -- | 0.706 | -1.72 | -- | -- | -0.102 | 18 | 14.82 | 555 | -- | -- |
| 191.11 | 0.646 | 3.66 | -0.912 | -- | -- | -- | -- | -0.446 | -- | -- | -- | -- | -- |
| 208.1 | 0.675 | 3.64 | -- | 0.304 | -- | -- | -- | -0.338 | 16.4 | -- | -- | -- | -- |
| 169.1 | 0.606 | 3.59 | -- | -- | -1.5 | -- | -- | -0.125 | -- | 11.28 | 1266 | -- | -- |
| 213.06 | 0.681 | 3.64 | -- | -- | -- | -- | -- | -0.345 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 150.34 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 6 |
| 2 | 150.57 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 11 |
| 8 | 150.75 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 3 |
| 21 | 151.04 | humidity | 90 | 14400 | > th | dose dependent | sin | 12 | NA |
| 32 | 151.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 23 | 1 |
| 39 | 151.31 | humidity | 90 | 14400 | > th | dose dependent | rect. | 10 | 20 |
| 50 | 151.40 | humidity | 90 | 14400 | > th | dose dependent | rect. | 21 | 16 |
| 163 | 152.45 | temperature | 10 | 270 | > th | dose dependent | rect. | 11 | 23 |
| 164 | 152.46 | humidity | 90 | 14400 | < th | dose independent | rect. | 22 | 1 |
| 184 | 152.60 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 199 | 152.87 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 3 |
| 211 | 153.04 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 20 |
| 244 | 153.51 | temperature | 15 | 720 | > th | dose dependent | rect. | 20 | 19 |
| 257 | 153.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 17 |
| 276 | 153.76 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 279 | 153.79 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 12 |
| 322 | 154.04 | humidity | 90 | 14400 | < th | dose independent | sin | 11 | NA |
| 366 | 154.21 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 16 |
| 367 | 154.22 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 13 |
| 402 | 154.37 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 418 | 154.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 426 | 154.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 434 | 154.46 | humidity | 90 | 14400 | > th | dose independent | rect. | 21 | 4 |
| 435 | 154.46 | humidity | 90 | 14400 | > th | dose independent | rect. | 20 | 9 |
| 460 | 154.52 | humidity | 90 | 14400 | > th | dose independent | sin | 10 | NA |
| 550 | 154.81 | humidity | 90 | 14400 | < th | dose independent | rect. | 10 | 21 |
| 566 | 154.85 | humidity | 90 | 14400 | > th | dose independent | rect. | 10 | 21 |
| 585 | 154.90 | temperature | 15 | 270 | > th | dose dependent | rect. | 1 | 21 |
| 649 | 155.07 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 15 |
| 843 | 155.50 | humidity | 90 | 14400 | > th | dose dependent | rect. | 3 | 5 |
| 859 | 155.54 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 873 | 155.56 | radiation | 1 | 4320 | > th | dose independent | rect. | 18 | 13 |
| 886 | 155.58 | radiation | 1 | 14400 | < th | dose dependent | rect. | 6 | 6 |
| 898 | 155.60 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 5 |
| 939 | 155.67 | radiation | 1 | 14400 | < th | dose dependent | rect. | 3 | 12 |
| 956 | 155.71 | humidity | 90 | 14400 | < th | dose independent | rect. | 5 | 23 |
| 958 | 155.71 | radiation | 1 | 14400 | < th | dose dependent | rect. | 21 | 18 |
| 1000 | 155.79 | radiation | 1 | 14400 | < th | dose dependent | rect. | 4 | 8 |