Os06g0707300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF295 family protein.
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Os06g0707300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF295 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 250.82 | 0.744 | 3.17 | 0.433 | 0.433 | 0.636 | 1.9 | 2.31 | -0.11 | 11.9 | 0.009991 | 65 | -- | -- |
| 254.91 | 0.744 | 3.15 | 0.62 | 0.41 | 0.605 | -0.644 | -- | -0.0733 | 12 | 0.02003 | 68 | -- | -- |
| 252.22 | 0.74 | 3.15 | 0.573 | 0.368 | 0.571 | -- | 0.854 | -0.0721 | 10.2 | 0.009996 | 60 | -- | -- |
| 255.71 | 0.745 | 3.15 | 0.561 | 0.45 | 0.632 | -- | -- | -0.0612 | 10.7 | 0.01 | 62 | -- | -- |
| 255.1 | 0.744 | 3.19 | 0.528 | -- | 0.351 | -- | 0.838 | -0.133 | -- | 0.009999 | 59 | -- | -- |
| 261.57 | 0.758 | 3.17 | 0.508 | 0.355 | -- | 0.622 | -- | -0.113 | 1.61 | -- | -- | -- | -- |
| 263.01 | 0.759 | 3.17 | 0.487 | 0.361 | -- | -- | -- | -0.117 | 2.07 | -- | -- | -- | -- |
| 259.15 | 0.75 | 3.17 | 0.515 | -- | 0.364 | -- | -- | -0.109 | -- | 0.00999 | 67 | -- | -- |
| 264.07 | 0.757 | 3.14 | -- | 0.436 | 0.628 | -- | -- | -0.079 | 10.7 | 0.3405 | 64 | -- | -- |
| 270.83 | 0.769 | 3.17 | 0.502 | -- | -- | -- | -- | -0.108 | -- | -- | -- | -- | -- |
| 269.25 | 0.768 | 3.19 | -- | 0.37 | -- | -- | -- | -0.171 | 2.11 | -- | -- | -- | -- |
| 266.45 | 0.76 | 3.18 | -- | -- | 0.359 | -- | -- | -0.153 | -- | 0.32 | 74 | -- | -- |
| 277.46 | 0.777 | 3.18 | -- | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 240.51 | humidity | 80 | 270 | < th | dose dependent | rect. | 6 | 1 |
| 3 | 241.16 | humidity | 80 | 270 | < th | dose independent | rect. | 5 | 2 |
| 20 | 244.65 | humidity | 70 | 1440 | > th | dose independent | rect. | 6 | 1 |
| 24 | 245.00 | humidity | 70 | 90 | < th | dose dependent | rect. | 17 | 17 |
| 33 | 245.38 | humidity | 60 | 10 | < th | dose independent | rect. | 10 | 1 |
| 35 | 245.38 | humidity | 60 | 10 | < th | dose dependent | rect. | 10 | 1 |
| 64 | 245.73 | humidity | 80 | 1440 | > th | dose independent | rect. | 4 | 3 |
| 101 | 245.85 | humidity | 70 | 10 | < th | dose dependent | rect. | 7 | 3 |
| 336 | 246.67 | radiation | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 350 | 246.68 | humidity | 70 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 363 | 246.75 | humidity | 70 | 1440 | > th | dose independent | rect. | 21 | 10 |
| 376 | 247.06 | humidity | 60 | 1440 | > th | dose independent | rect. | 24 | 9 |
| 381 | 247.17 | humidity | 60 | 90 | < th | dose independent | rect. | 17 | 17 |
| 382 | 247.20 | temperature | 20 | 90 | < th | dose dependent | rect. | 8 | 1 |
| 403 | 247.29 | humidity | 80 | 10 | > th | dose independent | rect. | 19 | 1 |
| 429 | 247.44 | humidity | 60 | 1440 | > th | dose independent | rect. | 6 | 3 |
| 438 | 247.60 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 2 |
| 452 | 247.65 | wind | 5 | 10 | > th | dose independent | rect. | 8 | 1 |
| 454 | 247.65 | temperature | 20 | 90 | < th | dose independent | rect. | 7 | 11 |
| 455 | 247.65 | wind | 5 | 10 | > th | dose dependent | rect. | 8 | 1 |
| 545 | 247.85 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 14 |
| 675 | 248.20 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 4 |
| 687 | 248.29 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 10 |
| 713 | 248.33 | wind | 1 | 10 | < th | dose dependent | rect. | 8 | 8 |
| 715 | 248.34 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 14 |
| 717 | 248.34 | radiation | 20 | 270 | > th | dose dependent | rect. | 6 | 1 |
| 793 | 248.48 | radiation | 20 | 270 | > th | dose independent | rect. | 6 | 1 |
| 813 | 248.49 | radiation | 30 | 10 | > th | dose dependent | rect. | 7 | 3 |
| 916 | 248.62 | wind | 1 | 10 | < th | dose dependent | rect. | 9 | 1 |
| 924 | 248.65 | wind | 1 | 10 | < th | dose independent | rect. | 8 | 10 |
| 964 | 248.69 | radiation | 40 | 10 | > th | dose dependent | rect. | 9 | 1 |
| 993 | 248.75 | temperature | 20 | 90 | > th | dose independent | rect. | 19 | 1 |