BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0493500 Os05g0493500|Os05g0493500
(449 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0493500 Similar to B-type cyclin (Fragment) 760 0.0
Os01g0805600 Similar to Cyclin IaZm (Fragment) 463 e-130
Os01g0281200 Similar to Type B-like cyclin (Fragment) 355 5e-98
Os06g0726800 G2/mitotic-specific cyclin 2 (B-like cyclin) (... 280 2e-75
Os04g0563700 Cyclin 277 1e-74
Os01g0233500 Cyclin 202 4e-52
Os12g0502300 Similar to Cyclin A-like protein (Fragment) 179 3e-45
Os03g0607600 Similar to Cyclin 164 1e-40
Os12g0581800 Cyclin-like domain containing protein 157 2e-38
Os12g0298950 Similar to Cyclin 155 5e-38
Os01g0233100 Cyclin-like domain containing protein 155 7e-38
Os03g0208800 125 8e-29
Os05g0237100 Similar to Type A-like cyclin 124 1e-28
Os03g0208700 123 3e-28
Os05g0501350 Hypothetical protein 102 5e-22
Os02g0607000 82 8e-16
Os02g0604800 78 2e-14
Os02g0605000 Cyclin-like domain containing protein 73 6e-13
Os03g0225200 Cyclin-like domain containing protein 72 8e-13
Os02g0604600 70 3e-12
Os02g0607100 70 3e-12
Os02g0607400 70 3e-12
>Os05g0493500 Similar to B-type cyclin (Fragment)
Length = 449
Score = 760 bits (1963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/405 (91%), Positives = 372/405 (91%)
Query: 45 LGDIGNVLNAHVVDGKIQLPEGINRPITRSFGAQLLKKAQENAVAANKIVVQNXXXXXXX 104
LGDIGNVLNAHVVDGKIQLPEGINRPITRSFGAQLLKKAQENAVAANKIVVQN
Sbjct: 45 LGDIGNVLNAHVVDGKIQLPEGINRPITRSFGAQLLKKAQENAVAANKIVVQNPARKEPA 104
Query: 105 XXXXXXXXXXXXNAAKASTGAGVNENKKPXXXXXXXXXXXXXXLKYSRKKVVNTLTSVLT 164
NAAKASTGAGVNENKKP LKYSRKKVVNTLTSVLT
Sbjct: 105 PKPAKKVVPRPENAAKASTGAGVNENKKPSESEGAGSSSGGSALKYSRKKVVNTLTSVLT 164
Query: 165 ARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRPTDYMSSQVE 224
ARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRPTDYMSSQVE
Sbjct: 165 ARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRPTDYMSSQVE 224
Query: 225 VNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIAS 284
VNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIAS
Sbjct: 225 VNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIAS 284
Query: 285 KYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGD 344
KYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGD
Sbjct: 285 KYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGD 344
Query: 345 KELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQ 404
KELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQ
Sbjct: 345 KELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQ 404
Query: 405 LRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCLA 449
LRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCLA
Sbjct: 405 LRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCLA 449
>Os01g0805600 Similar to Cyclin IaZm (Fragment)
Length = 328
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 217/305 (71%), Positives = 261/305 (85%), Gaps = 5/305 (1%)
Query: 149 KYSRKKVVNTLTSVLTARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRT 208
K SRKKV+NTLTSVLTARSK ACGIT+KP+EV+EDIDKLDGDN+LAVV+YIEDIY FY+
Sbjct: 22 KCSRKKVINTLTSVLTARSKVACGITDKPREVIEDIDKLDGDNELAVVDYIEDIYKFYKV 81
Query: 209 AQLERRPTDYMSSQVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVL 268
A+ E RP DY+ +QVE+N KMRAILADWII+VH+KFELMPETLYL+MYVIDRYLS+Q V
Sbjct: 82 AENECRPCDYIDTQVEINSKMRAILADWIIEVHHKFELMPETLYLSMYVIDRYLSMQQVQ 141
Query: 269 RRELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVP 328
RRELQLVGV+AMLIA KYEE+WAPEV D I + D+AY+R+ ILAMEK ILN+LQWN+TVP
Sbjct: 142 RRELQLVGVSAMLIACKYEEIWAPEVNDFILISDSAYTREQILAMEKGILNKLQWNLTVP 201
Query: 329 TPYVFLLRFIKAAG-----GDKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCT 383
T YVF++R++KA DKE+E+M FFF+E+AL +YG+ + PS VAASAVYAA+ T
Sbjct: 202 TAYVFIMRYLKAGASADNKSDKEMEHMAFFFAELALMQYGLVASLPSKVAASAVYAARLT 261
Query: 384 LKRSPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRP 443
LK+SPLWT TLKHHTGFTESQL + AK+LV +H+ APESKL+ Y+KY+SEQLG V+LR
Sbjct: 262 LKKSPLWTDTLKHHTGFTESQLLDSAKLLVTSHSTAPESKLRVVYKKYSSEQLGGVALRS 321
Query: 444 PAVCL 448
PAV L
Sbjct: 322 PAVEL 326
>Os01g0281200 Similar to Type B-like cyclin (Fragment)
Length = 423
Score = 355 bits (910), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 174/296 (58%), Positives = 229/296 (77%), Gaps = 1/296 (0%)
Query: 151 SRKKVVNTLTSVLTARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQ 210
SR+ + TLTS+LT S+ + G+ KE++ DID D N+LAVV+Y+EDIY FYR +
Sbjct: 116 SRRAPIQTLTSILTKCSRASDGVISPKKELIYDIDASDSHNELAVVDYVEDIYRFYRNTE 175
Query: 211 LERRP-TDYMSSQVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLR 269
RP YM SQ E+N +MRAIL DW+I+VHY+ LMPETLYLT+Y+ID+YLSL+ V R
Sbjct: 176 NTYRPLCTYMVSQTEINERMRAILTDWLIEVHYRLMLMPETLYLTVYIIDQYLSLENVPR 235
Query: 270 RELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPT 329
+ELQLVGV+AMLIA KYEE WAP V+D + + DN++SRQ +L+ EK+ILN+LQWN+TVPT
Sbjct: 236 KELQLVGVSAMLIACKYEETWAPLVKDFLVISDNSFSRQQVLSTEKSILNKLQWNLTVPT 295
Query: 330 PYVFLLRFIKAAGGDKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPL 389
Y+F+LR++KAA GD+ELE+M FF++E+AL +Y M PS++AA+AVYAA+CTL SPL
Sbjct: 296 MYMFILRYLKAALGDEELEHMTFFYAELALVQYSMLFFAPSVIAAAAVYAARCTLGLSPL 355
Query: 390 WTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPA 445
W+ L++HTG E QL ECA+ LV+ HAAAPES+ K Y+KYAS +LG VSL PA
Sbjct: 356 WSDLLEYHTGLAEPQLLECARRLVSLHAAAPESRQKVVYKKYASPKLGAVSLHSPA 411
>Os06g0726800 G2/mitotic-specific cyclin 2 (B-like cyclin) (CycOs2)
Length = 419
Score = 280 bits (716), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/275 (49%), Positives = 191/275 (69%), Gaps = 1/275 (0%)
Query: 175 EKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQ-LERRPTDYMSSQVEVNPKMRAIL 233
E +E DID D +N LAVVEY+++IY+FYR ++ L +YM SQ ++N KMR IL
Sbjct: 139 EDIEEAAPDIDSCDANNSLAVVEYVDEIYSFYRRSEGLSCVSPNYMLSQNDINEKMRGIL 198
Query: 234 ADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPE 293
DW+I+VHYK EL+ ETL+LT+ +IDR+L+ + V+R++LQLVGV AML+A KYEE+ P
Sbjct: 199 IDWLIEVHYKLELLDETLFLTVNIIDRFLARENVVRKKLQLVGVTAMLLACKYEEVSVPV 258
Query: 294 VQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKELENMVFF 353
V+DLI +CD AY+R IL ME+ I+N LQ++++VPTPY F+ RF+KAA DK+LE M FF
Sbjct: 259 VEDLILICDRAYTRTDILEMERMIVNTLQFDMSVPTPYCFMRRFLKAAQSDKKLELMSFF 318
Query: 354 FSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQLRECAKVLV 413
E++L EY M PS++AA+A+Y AQCT+ W + HT ++E QL EC+K++V
Sbjct: 319 IIELSLVEYEMLKFQPSMLAAAAIYTAQCTINGFKSWNKCCELHTKYSEEQLMECSKMMV 378
Query: 414 NAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCL 448
H A KL +RKY++ + G + PAV L
Sbjct: 379 ELHQKAGHGKLTGVHRKYSTFRYGCAAKSEPAVFL 413
>Os04g0563700 Cyclin
Length = 420
Score = 277 bits (708), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/279 (49%), Positives = 192/279 (68%), Gaps = 2/279 (0%)
Query: 171 CGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYR-TAQLERRPTDYMSSQVEVNPKM 229
C T++ E + DID D N LA EY+E++Y FYR ++ DYMSSQ ++N KM
Sbjct: 128 CNDTDE-DESMMDIDSADSGNPLAATEYVEELYKFYRENEEMSCVQPDYMSSQGDINEKM 186
Query: 230 RAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEM 289
RAIL DW+I+VH+KFELM ETL+LT+ ++DR+L Q V R++LQLVGV AML+A KYEE+
Sbjct: 187 RAILIDWLIEVHHKFELMDETLFLTVNIVDRFLEKQVVPRKKLQLVGVTAMLLACKYEEV 246
Query: 290 WAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKELEN 349
P V+DL+ + D AY++ IL MEK ILN LQ+N++VPTPYVF+ RF+KAA DK+L+
Sbjct: 247 AVPVVEDLVLISDRAYTKGQILEMEKLILNTLQFNMSVPTPYVFMRRFLKAAQSDKQLQL 306
Query: 350 MVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKHHTGFTESQLRECA 409
+ FF E++L EY M PSL+AA+AVY AQC L R WT T + H+ +T QL EC+
Sbjct: 307 LSFFILELSLVEYQMLKYRPSLLAAAAVYTAQCALTRCQQWTKTCELHSRYTGEQLLECS 366
Query: 410 KVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRPPAVCL 448
+++V+ H A KL +RKY++ + G + PA+ L
Sbjct: 367 RMMVDFHQKAGAGKLTGVHRKYSTFKFGCAAKTEPALFL 405
>Os01g0233500 Cyclin
Length = 508
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 113/270 (41%), Positives = 164/270 (60%), Gaps = 11/270 (4%)
Query: 183 DIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRP-TDYMSS-QVEVNPKMRAILADWIIDV 240
D+D D QL DIY R A+ +RP TD+M + Q +VNP MRAIL DW+++V
Sbjct: 226 DVDNNYEDPQLCAT-LASDIYMHLREAETRKRPSTDFMETIQKDVNPSMRAILIDWLVEV 284
Query: 241 HYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHV 300
++ L+P+TLYLT+ IDRYLS + R+ LQL+GVA MLIA+KYEE+ AP+V++ ++
Sbjct: 285 AEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYEEICAPQVEEFCYI 344
Query: 301 CDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKE-----LENMVFFFS 355
DN Y R +L ME ++LN L++ +T PT FL RF++ A E LE + + +
Sbjct: 345 TDNTYFRDEVLEMEASVLNYLKFEVTAPTAKCFLRRFVRVAQVSDEDPALHLEFLANYVA 404
Query: 356 EMALKEYGMASLCPSLVAASAVYAAQCTLK--RSPLWTSTLKHHTGFTESQLRECAKVLV 413
E++L EY + S PSLVAASA++ A+ L+ + P W STL H+T + S+L +C K L
Sbjct: 405 ELSLLEYNLLSYPPSLVAASAIFLAKFILQPTKHP-WNSTLAHYTQYKSSELSDCVKALH 463
Query: 414 NAHAAAPESKLKTAYRKYASEQLGRVSLRP 443
+ P S L KY + V+ +P
Sbjct: 464 RLFSVGPGSNLPAIREKYTQHKYKFVAKKP 493
>Os12g0502300 Similar to Cyclin A-like protein (Fragment)
Length = 490
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/259 (36%), Positives = 162/259 (62%), Gaps = 12/259 (4%)
Query: 183 DIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRP-TDYMSS-QVEVNPKMRAILADWIIDV 240
DID +G+ Q+ Y +IY ++L RRP ++YM + Q ++ MR IL DW+++V
Sbjct: 213 DIDNDNGNPQM-CASYASEIYTNLMASELIRRPRSNYMEALQRDITKGMRGILIDWLVEV 271
Query: 241 HYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHV 300
+++L+P+TLYLT+ +IDR+LS + R++LQL+G+ +MLIASKYEE+ AP V++ +
Sbjct: 272 SEEYKLVPDTLYLTINLIDRFLSQHYIERQKLQLLGITSMLIASKYEEICAPRVEEFCFI 331
Query: 301 CDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKELENMVF-----FFS 355
DN Y++ +L ME +LN + ++++VPT FL RF++AA + + ++ + +
Sbjct: 332 TDNTYTKAEVLKMEGLVLNDMGFHLSVPTTKTFLRRFLRAAQASRNVPSITLGYLANYLA 391
Query: 356 EMALKEYGMASLCPSLVAASAVYAAQCTLKRSPL-WTSTLKHHTGFTESQLRECA---KV 411
E+ L +Y PS+VAASAV+ A+ TL +S + W TL+H+T + S ++ C +
Sbjct: 392 ELTLIDYSFLKFLPSVVAASAVFLARWTLDQSDIPWNHTLEHYTSYKSSDIQICVCALRE 451
Query: 412 LVNAHAAAPESKLKTAYRK 430
L + + P + ++ YR+
Sbjct: 452 LQHNTSNCPLNAIREKYRQ 470
>Os03g0607600 Similar to Cyclin
Length = 395
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 102/258 (39%), Positives = 158/258 (61%), Gaps = 11/258 (4%)
Query: 198 YIEDIYNFYRT--AQLERRPT-DYMSS-QVEVNPKMRAILADWIIDVHYKFELMPETLYL 253
Y DI ++ R+ Q +RRP DY+ + QV+V MR IL DW+++V +++L+ +TLYL
Sbjct: 103 YASDINSYLRSMEVQAKRRPAADYIETVQVDVTANMRGILVDWLVEVAEEYKLVSDTLYL 162
Query: 254 TMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAM 313
T+ IDR+LS + + R++LQL+GV+AMLIASKYEE+ P V+D ++ DN Y +Q ++ M
Sbjct: 163 TVSYIDRFLSAKSINRQKLQLLGVSAMLIASKYEEISPPNVEDFCYITDNTYMKQEVVKM 222
Query: 314 EKNILNRLQWNITVPTPYVFLLRFIKAAGGDKE-----LENMVFFFSEMALKEYGMASLC 368
E++ILN L++ + PT FL FI+++ D + LE M + +E++L EYG L
Sbjct: 223 ERDILNVLKFEMGNPTTKTFLRMFIRSSQEDDKYPSLPLEFMCSYLAELSLLEYGCVRLL 282
Query: 369 PSLVAASAVYAAQCTLKR-SPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTA 427
PS+VAAS V+ A+ TL + W+ L+ TG+ S+L++C + + S L
Sbjct: 283 PSVVAASVVFVARLTLDSDTNPWSKKLQEVTGYRASELKDCITCIHDLQLNRKGSSLMAI 342
Query: 428 YRKYASEQLGRVS-LRPP 444
KY + VS L PP
Sbjct: 343 RDKYKQHRFKGVSTLLPP 360
>Os12g0581800 Cyclin-like domain containing protein
Length = 385
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 98/260 (37%), Positives = 153/260 (58%), Gaps = 13/260 (5%)
Query: 197 EYIEDIYNFYRTAQLERR---PTDYMSS-QVEVNPKMRAILADWIIDVHYKFELMPETLY 252
+Y DIY + R+ ++E R DY+ + QV+V MRAIL DW+++V +++L+ +TLY
Sbjct: 114 QYASDIYTYLRSMEVEARRQSAADYIEAVQVDVTANMRAILVDWLVEVADEYKLVADTLY 173
Query: 253 LTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILA 312
L + +DRYLS P+ R LQL+GV AMLIA+KYEE+ P V+D ++ DN Y+RQ ++
Sbjct: 174 LAVSYLDRYLSAHPLRRNRLQLLGVGAMLIAAKYEEISPPHVEDFCYITDNTYTRQEVVK 233
Query: 313 MEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKE-----LENMVFFFSEMALKEYGMASL 367
ME +IL L++ + PT FL RF ++ DK+ LE M + +E++L +YG
Sbjct: 234 MESDILKLLEFEMGNPTIKTFLRRFTRSCQEDKKRSSLLLEFMGSYLAELSLLDYGCLRF 293
Query: 368 CPSLVAASAVYAAQCTLK--RSPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLK 425
PS+VAAS V+ A+ + +P W+ ++ TG+ S+L++C + + S L
Sbjct: 294 LPSVVAASVVFVAKLNIDPYTNP-WSKKMQKLTGYKVSELKDCILAIHDLQLRKKCSNLT 352
Query: 426 TAYRKYASEQLGRVS-LRPP 444
KY + VS L PP
Sbjct: 353 AIRDKYKQHKFKCVSTLLPP 372
>Os12g0298950 Similar to Cyclin
Length = 391
Score = 155 bits (392), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 97/265 (36%), Positives = 141/265 (53%), Gaps = 38/265 (14%)
Query: 183 DIDKLDGDNQLAVVEYIEDIYNFYRTAQLERRP-TDYMSS-QVEVNPKMRAILADWIIDV 240
D+D D QL DIY R A+ + P TD+M + Q +VNP MRAIL DW+++V
Sbjct: 146 DVDNNYEDPQLCAT-LASDIYMHLREAETRKHPSTDFMETLQKDVNPSMRAILIDWLVEV 204
Query: 241 HYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQDLIHV 300
++ L+P+TLYLT+ IDRYLS + R+ LQL+GVA MLIA+KY+E+ AP+V++ ++
Sbjct: 205 AEEYRLVPDTLYLTVNYIDRYLSGNEINRQRLQLLGVACMLIAAKYKEICAPQVEEFCYI 264
Query: 301 CDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDKELENMVFFFSEMALK 360
DN Y R A+ LE + + +E++L
Sbjct: 265 TDNTYFRDEDPAL--------------------------------HLEFLANYVAELSLL 292
Query: 361 EYGMASLCPSLVAASAVYAAQCTLK--RSPLWTSTLKHHTGFTESQLRECAKVLVNAHAA 418
EY + S PSLVAASA++ A+ L+ + P W STL H+T + S+L +C K L
Sbjct: 293 EYNLLSYPPSLVAASAIFLAKFILQPAKHP-WNSTLAHYTQYKSSELSDCVKALHRLFCV 351
Query: 419 APESKLKTAYRKYASEQLGRVSLRP 443
P S L KY + V+ +P
Sbjct: 352 GPGSNLPAIREKYTQHKYKFVAKKP 376
>Os01g0233100 Cyclin-like domain containing protein
Length = 634
Score = 155 bits (391), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 137/238 (57%), Gaps = 25/238 (10%)
Query: 213 RRP-TDYMSS-QVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRR 270
+RP TD+M + Q +VNP MRAIL DW+++V ++ L+P+TLYLT+ IDRYLS + R+
Sbjct: 360 KRPSTDFMETIQKDVNPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNEINRQ 419
Query: 271 ELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTP 330
LQL+GVA MLIA+KYEE+ AP+V++ ++ DN Y R E N N L
Sbjct: 420 RLQLLGVACMLIAAKYEEICAPQVEEFCYITDNTYFRDECWN-ESNSNNSL--------- 469
Query: 331 YVFLLRFIKAAGGDKE----------LENMVFFFSEMALKEYGMASLCPSLVAASAVYAA 380
+ RF++ A E LE + + +E++L EY + S PSLVAASA++ A
Sbjct: 470 IAYNRRFVRVAQVSDELFIVQDPALHLEFLANYVAELSLLEYNLLSYPPSLVAASAIFLA 529
Query: 381 QCTLK--RSPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTAYRKYASEQL 436
+ L+ + P W STL H+T + S+L +C K L + P S L KY ++
Sbjct: 530 KFILQPTKHP-WNSTLAHYTQYKSSELSDCVKALHRLFSVGPGSNLPAIREKYTQHKI 586
>Os03g0208800
Length = 406
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 16/274 (5%)
Query: 181 VEDIDK----LDGDNQLAVVEYIEDIYNFYRTAQLERRPTDYMSSQVEVNP-KMRAILAD 235
VEDID+ L+G ++ ++ + TA+ RRP +++ MR L +
Sbjct: 120 VEDIDRYLRSLEGREMAKCLDAVQ-----FCTAEESRRPIVNYDQEIQGGHINMRGKLVN 174
Query: 236 WIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAAMLIASKYEEMWAPEVQ 295
W+ ++ Y F L LYL + +DR+LS V R LQL+G +A+ +ASKYE+ P +
Sbjct: 175 WMEELVYGFNLWDNILYLAVSYVDRFLSRNVVNRERLQLLGTSALFVASKYEDRCHPSAR 234
Query: 296 DLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGDK-----ELENM 350
+ + Y+ Q ++AME NIL+ L + + PT FL RF+ + G LE M
Sbjct: 235 FFSSITADTYTTQQVVAMEANILSFLNFQMGSPTVITFLRRFLFSCRGSNRPINIRLELM 294
Query: 351 VFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLK-RSPLWTSTLKHHTGFTESQLRECA 409
+ +E++L + PS+VAA+ ++ + TL + W +++ TG+ S + +C
Sbjct: 295 CIYLAELSLLDDYNIRFLPSIVAAACLFVGKFTLNPNTRPWNLSVQRITGYKVSDIEDCI 354
Query: 410 KVLVNAHAAAPESKLKTAYRKYASEQLGRVSLRP 443
+ + + A S L+ KY + RVS P
Sbjct: 355 RSIHDLQAGRKWSNLRAIRSKYEDDAFERVSTIP 388
>Os05g0237100 Similar to Type A-like cyclin
Length = 204
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 111/187 (59%), Gaps = 10/187 (5%)
Query: 269 RRELQLVGVAAMLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVP 328
RR++QL+GVA +LIASKYEE+ P+V++L ++ DN Y++ +L ME ++L L++ +T P
Sbjct: 5 RRKMQLLGVACLLIASKYEEICPPQVEELCYISDNTYTKDEVLKMEASVLKYLKFEMTAP 64
Query: 329 TPYVFLLRFIKAAGGDKE-----LENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCT 383
T FL RF++AA E LE + + +E++L EY + PSL+AAS+++ A+
Sbjct: 65 TTKCFLRRFLRAAQVCHEAPVLHLEFLANYIAELSLLEYSLICYVPSLIAASSIFLAKFI 124
Query: 384 LK--RSPLWTSTLKHHTGFTESQLRECAKVLVNAHAAAPESKLKTAYRKYASEQLGRVSL 441
LK +P W STL +T + S L CAK L P L+ KY+ + V+
Sbjct: 125 LKPTENP-WNSTLSFYTQYKPSDLCNCAKGLHRLFLVGPGGNLRAVREKYSQHKYKFVAK 183
Query: 442 R--PPAV 446
+ PP++
Sbjct: 184 KYSPPSI 190
>Os03g0208700
Length = 389
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 123/231 (53%), Gaps = 10/231 (4%)
Query: 165 ARSKHACGITEKPKEVVEDIDKLDGDNQLAVVEYIEDIYNFYRTAQLE--RRPTDYMSSQ 222
+R A G + +P + QLAVV Y+EDI + R+ + E RRP +
Sbjct: 81 SREPGAAGGSREPGAAGGSRQPVPDAAQLAVVPYVEDIDRYLRSLEAEQTRRPMINYVQE 140
Query: 223 VE---VNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRRELQLVGVAA 279
++ +N +R IL DW+ DV Y F L ETL+ + +DR+LS +L+L+G A
Sbjct: 141 IQGGIINMDVRGILVDWMADVAYVFNLQEETLHHAVSYVDRFLSKIAFPGDKLKLLGTTA 200
Query: 280 MLIASKYEEMWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIK 339
+ +ASKYEE+ P V++ V N Y+ Q + ME +IL L +++ PT FL +F+
Sbjct: 201 LFVASKYEEIHPPHVRNFSAVTVNTYTTQQVSKMELDILRFLNFDVGSPTVITFLRKFLT 260
Query: 340 AAGG-----DKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLK 385
+ G +++LE M + +E++L + PS+VAA+ ++ + TL
Sbjct: 261 SCCGGNNSSNRKLELMCNYLAELSLLDDYYIRFLPSIVAAACLFVGKFTLN 311
>Os05g0501350 Hypothetical protein
Length = 182
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/106 (58%), Positives = 65/106 (61%), Gaps = 6/106 (5%)
Query: 58 DGKIQLPEGINRPITRSFGAQLLKKAQENAVAANKIVVQNXXXXXXXXXXXXXXXXXXXN 117
+ KIQLPEGINRPITRSFGAQLLKKAQENAV ANKI V+ N
Sbjct: 35 NSKIQLPEGINRPITRSFGAQLLKKAQENAVGANKIPVR----KEPAPKPAKKVVPRLEN 90
Query: 118 AAKASTGAGVNENKKPXXXXXXXXXXXXXXL--KYSRKKVVNTLTS 161
AAKASTGAGVNENKKP KYSRKKVVNTL +
Sbjct: 91 AAKASTGAGVNENKKPSESEGAGSSGSGGGSAHKYSRKKVVNTLNN 136
>Os02g0607000
Length = 390
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 108/215 (50%), Gaps = 13/215 (6%)
Query: 212 ERRPTDYMSS--QVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLS---LQP 266
ER DY+ + +++ RA L W+ + +++EL TL+ + DR+LS L
Sbjct: 175 ERPSPDYLDTVHNGQISAASRASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSARALPS 234
Query: 267 VLRRELQLVGVAAMLIASKYEE---MWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQW 323
+L LVG A+ A+KYE+ ++ + +++ + A S Q +LAME+ ++ L +
Sbjct: 235 YTEHQLSLVGATAVYTAAKYEDQGTVFKLDAREIASYGEFA-SAQEVLAMEREMMAALGY 293
Query: 324 NITVPTPYVFLLRFIKAAGGDKEL--ENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQ 381
+ P F+ F + + G +EL + + ++ +L+ YG PS+VAA+ + A+
Sbjct: 294 RLGGPNAETFVEHFTRYSKGKEELRVQRLARHIADRSLESYGCLGYLPSVVAAAVISIAR 353
Query: 382 CTLKRSPL--WTSTLKHHTGFTESQLRECAKVLVN 414
TL W+S L TG++ + C ++N
Sbjct: 354 WTLNPPGALPWSSELHELTGYSSQDISSCVLTVLN 388
>Os02g0604800
Length = 400
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 93/192 (48%), Gaps = 14/192 (7%)
Query: 229 MRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQP----VLRRELQLVGVAAMLIAS 284
+RA + ++ + +EL TL Y +DRYLS+ P VL +L+LVG A+ +A+
Sbjct: 187 VRASMIAFMDEFSRFYELADGTLQRAAYFLDRYLSVTPESDDVL--QLRLVGATAVFLAA 244
Query: 285 KYEEMWAPEVQDLIHV---CDNAYSRQH--ILAMEKNILNRLQWNITVPTPYVFLLRFIK 339
KYE+ + D V C +H + ME IL L +N++ PT F+ F +
Sbjct: 245 KYEDQYTLRKIDASMVAARCGYTSETRHKMVSCMETEILAALDYNLSGPTASTFVQHFTR 304
Query: 340 AAGGDKE---LENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQCTLKRSPLWTSTLKH 396
G KE L+ F++ +L YG PS+VAASA++ A+ + W+ L
Sbjct: 305 YYGDGKEEELLKEAAHRFTDGSLLTYGFHRYLPSVVAASAIFLARLHVLGHEPWSRDLAE 364
Query: 397 HTGFTESQLREC 408
TG+ L C
Sbjct: 365 LTGYEAIDLMGC 376
>Os02g0605000 Cyclin-like domain containing protein
Length = 446
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 113/215 (52%), Gaps = 14/215 (6%)
Query: 213 RRPT-DYMSS--QVEVNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPV-- 267
+RP+ DY+ + +++ RA L W+ + +++EL TL+ + DR+LS++ +
Sbjct: 231 QRPSPDYLDTVQGGQISAAARASLVAWMGRLTHRYELAAGTLHRAVSYFDRFLSVRALPS 290
Query: 268 -LRRELQLVGVAAMLIASKYEE---MWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQW 323
+L LV A+ A+KYE+ ++ + +++ + A S Q +LAME+ ++ L +
Sbjct: 291 YTAHQLSLVAATAVYTAAKYEDQGTVFKLDAREIASYGEFA-SAQEVLAMEREMMAALGY 349
Query: 324 NITVPTPYVFLLRFIKAAGGDKEL--ENMVFFFSEMALKEYGMASLCPSLVAASAVYAAQ 381
+ P F+ F + + G +EL + + ++ +L+ YG PS+VAA+A+ A+
Sbjct: 350 RLGGPNAETFVEHFTRYSKGKEELRVQRLACHVADRSLESYGCLGYLPSMVAAAAISIAR 409
Query: 382 CTLKRSPL--WTSTLKHHTGFTESQLRECAKVLVN 414
TL W+S L+ TG++ + C ++N
Sbjct: 410 WTLNPPGALPWSSELQELTGYSSQDISSCILTVLN 444
>Os03g0225200 Cyclin-like domain containing protein
Length = 469
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 81/146 (55%), Gaps = 3/146 (2%)
Query: 228 KMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVL-RRELQLVGVAAMLIASKY 286
+ R ++ +WI++ +L PET+++ + ++DR+L+ V R LQL+G+A +A++
Sbjct: 274 EQRVVMVNWIMEHSQAMKLQPETVFMGIGLMDRFLTRGYVKGSRNLQLLGIACTTLATRI 333
Query: 287 EE--MWAPEVQDLIHVCDNAYSRQHILAMEKNILNRLQWNITVPTPYVFLLRFIKAAGGD 344
EE + +Q V N YSR ++AME + L + V T + FL ++KAA D
Sbjct: 334 EENQPYNCILQKAFKVGINTYSRSEVVAMEWLVQEVLDFQCFVTTTHHFLWFYLKAANAD 393
Query: 345 KELENMVFFFSEMALKEYGMASLCPS 370
+E++ + + ++L ++ S PS
Sbjct: 394 DRVEDLAKYLALLSLLDHKHLSFWPS 419
>Os02g0604600
Length = 1541
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 94/201 (46%), Gaps = 13/201 (6%)
Query: 214 RPTDYMSSQVE---VNPKMRAILADWIIDVHYKFELMPETLYLTMYVIDRYLSLQPVLRR 270
RP+ Y + ++ +RA + ++ + K +L TL Y +DRYLS+ P
Sbjct: 116 RPSPYFLETTQGGRMSALVRASMIAFMGEFSRKNKLADGTLQRAAYFLDRYLSVTPESDD 175
Query: 271 ELQL--VGVAAMLIASKYEEMWAPEVQDLIHV---CDNAYSRQHILA--MEKNILNRLQW 323
LQL VG A+ +A+KYE+ + D V C +H + ME +L L +
Sbjct: 176 ALQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARCGYTSETRHKMVSIMETEMLAALGF 235
Query: 324 NITVPTPYVFLLRFIKAAGG---DKELENMVFFFSEMALKEYGMASLCPSLVAASAVYAA 380
N+ PT Y F+ F + G +K+L+ ++ L YG PS+VAAS+++ A
Sbjct: 236 NLGGPTAYTFVEHFTRYYGDGEEEKQLKEAAHRVADGTLLTYGFHRYLPSMVAASSIFLA 295
Query: 381 QCTLKRSPLWTSTLKHHTGFT 401
+ W++ L T F+
Sbjct: 296 RLHELGHEPWSNDLAELTAFS 316
>Os02g0607100
Length = 400
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 96/209 (45%), Gaps = 15/209 (7%)
Query: 214 RPTDYMSSQVEVNPKMRAILADWIIDVHYKF----ELMPETLYLTMYVIDRYLSLQPVLR 269
RP+ Y + +M A++ +I +F EL TL Y +DRYLS+ P
Sbjct: 169 RPSPYFLETTQGG-RMTALVRASMIAFMDEFSQFHELADGTLQRAAYFLDRYLSVTPESD 227
Query: 270 RELQL--VGVAAMLIASKYEEMWAPEVQDLIHV---CDNAYSRQH--ILAMEKNILNRLQ 322
LQL VG A+ +A+KYE+ + D V C +H + ME +L L
Sbjct: 228 DALQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARCGYTSETRHKMVSIMETEMLAALG 287
Query: 323 WNITVPTPYVFLLRFIKAAGGDKELENMVFF---FSEMALKEYGMASLCPSLVAASAVYA 379
+N+ PT Y F+ F + G +E E + F++ +L YG PS+VAAS+++
Sbjct: 288 FNLGGPTAYTFVEHFTRYYGDGEEEELLKEAAHRFADGSLLTYGFHRYLPSIVAASSIFL 347
Query: 380 AQCTLKRSPLWTSTLKHHTGFTESQLREC 408
A+ + W+ L TG+ L C
Sbjct: 348 ARLDVLGHEPWSQDLAELTGYKAIDLMGC 376
>Os02g0607400
Length = 971
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 15/210 (7%)
Query: 214 RPTDYMSSQVEVNPKMRAILADWIIDVHYKF----ELMPETLYLTMYVIDRYLSLQPVLR 269
RP+ Y + +M A++ +I +F EL TL Y +DRYLS+ P
Sbjct: 627 RPSPYFLETTQGG-RMTALVRASMIAFMDEFSRFHELADGTLQRAAYFLDRYLSVTPESD 685
Query: 270 RELQL--VGVAAMLIASKYEEMWAPEVQDLIHVCD----NAYSRQHILA-MEKNILNRLQ 322
LQL VG A+ +A+KYE+ + D V + +R +++ ME +L L
Sbjct: 686 DALQLRLVGATAVFLAAKYEDQYTLRKIDASMVAARRGYTSETRHKMVSIMETEMLAALG 745
Query: 323 WNITVPTPYVFLLRFIKAAGGDKELENMVFF---FSEMALKEYGMASLCPSLVAASAVYA 379
+N+ PT Y F+ F + G +E E + F++ +L YG PS+VAAS+++
Sbjct: 746 FNLGGPTAYTFVEHFTRYYGDGEEEELLKEAAHRFADGSLLTYGFHRYLPSIVAASSIFL 805
Query: 380 AQCTLKRSPLWTSTLKHHTGFTESQLRECA 409
A+ + W+ L TG+ L C
Sbjct: 806 ARLDVLGHEPWSQDLAELTGYKAIDLMGCG 835
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.132 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,700,071
Number of extensions: 409995
Number of successful extensions: 930
Number of sequences better than 1.0e-10: 23
Number of HSP's gapped: 897
Number of HSP's successfully gapped: 23
Length of query: 449
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 345
Effective length of database: 11,605,545
Effective search space: 4003913025
Effective search space used: 4003913025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)