BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0413200 Os05g0413200|AK122099
(444 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0413200 Beta-tubulin 865 0.0
Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin) 863 0.0
Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin) 860 0.0
Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin) 843 0.0
Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin) 841 0.0
Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta su... 825 0.0
Os06g0671900 Similar to Beta-tubulin 805 0.0
AK109162 775 0.0
AK110204 717 0.0
AK110638 566 e-161
Os07g0574800 Tubulin alpha-1 chain 367 e-102
AK106047 365 e-101
Os11g0247300 Alfa-tubulin 363 e-100
Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubu... 362 e-100
Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubu... 358 4e-99
AK067478 350 2e-96
AK105538 347 1e-95
Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubu... 271 6e-73
Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin) 268 6e-72
Os06g0169600 75 8e-14
>Os05g0413200 Beta-tubulin
Length = 444
Score = 865 bits (2235), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/426 (96%), Positives = 412/426 (96%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin)
Length = 447
Score = 863 bits (2230), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/426 (96%), Positives = 411/426 (96%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRY GTSDLQLERVNVYYNEASCGRFV
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LSMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin)
Length = 447
Score = 860 bits (2223), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 408/426 (95%), Positives = 410/426 (96%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEVVCDEHGIDPTGRY G SDLQLERVNVYYNEASCGRFV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LSMASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin)
Length = 444
Score = 843 bits (2179), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/426 (92%), Positives = 407/426 (95%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEV+CDEHG+D TGRYAG SDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPPRG
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L MA+TFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin)
Length = 447
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/426 (92%), Positives = 406/426 (95%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GRFV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L MASTF+GNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVA 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)
Length = 446
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 391/426 (91%), Positives = 400/426 (93%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEV+C EHG+DPTG Y GTS QLER+NVY+NEAS GR V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDS+R+GP G IFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLT PSFGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRG+MSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+
Sbjct: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVA 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>Os06g0671900 Similar to Beta-tubulin
Length = 433
Score = 805 bits (2078), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/426 (89%), Positives = 393/426 (92%), Gaps = 13/426 (3%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEV+CDEHGID TG+Y+G SDLQLER+NVYYNEAS GR+V
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAENCDCLQGFQVCH ISKIREEYPDRMMLTFSVFPSPKVSDTVV
Sbjct: 121 RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL TP+FGDLNHLISATMSGVTCCL
Sbjct: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM
Sbjct: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
CAADPRHGRYLTASAMFRGKMSTKEVDEQM+NVQNKNSSYFVEWIPNNVKSSVCDIPP G
Sbjct: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L MASTF+GNSTSIQEM RKAFLHWYTGEGMDEMEFTEAESNMNDLV+
Sbjct: 361 LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTEAESNMNDLVA 407
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 408 EYQQYQ 413
>AK109162
Length = 444
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 357/426 (83%), Positives = 392/426 (92%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREI+HIQ GQCGNQIG+KFWEV+ DEHGIDPTG Y G SDLQLER+NVY+NEA+ G++V
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGKYV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVL+DLEPGTMDSVR+GP+GQIFRPDNFVFGQSGAGNNWAKGHYTEGAEL+DSVLDVV
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
RKEAE+CDCLQGFQ+ H ISKIREEYPDR+M TFSV PSPKVSDTVV
Sbjct: 121 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLSVHQLVEN DE +DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CL
Sbjct: 181 EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLN+DLRKLAVN++PFPRLHFFM GFAPLTSRGSQQYRALTVPELTQQM+DAKNMM
Sbjct: 241 RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
A DPRHGRYLT +A+FRG+MS KEVDEQM+NVQNKNSSYFVEWIPNNVK++VCDIPPRG
Sbjct: 301 AACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L M++TF+GNST+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>AK110204
Length = 447
Score = 717 bits (1850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 325/426 (76%), Positives = 376/426 (88%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREI+H+Q GQCGNQ+G+ FW+ + EHG+D +G Y GTSDLQLER+NVY+NEAS ++V
Sbjct: 1 MREIVHLQTGQCGNQVGAAFWQTISGEHGLDSSGVYNGTSDLQLERMNVYFNEASGNKYV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVL+DLEPGTMD+VR GP+GQ+FRPDNFVFGQSGAGNNWAKGHYTEGAEL+D VLDVV
Sbjct: 61 PRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLDVV 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
R+EAE CDCLQGFQ+ H ISKIRE +PDRMM TFSV PSPKVSDTVV
Sbjct: 121 RREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREGFPDRMMATFSVLPSPKVSDTVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNATLS+HQLVEN+D +DNEALYDIC RTLKL+ PS+GDLNHL+SA MSGVT CL
Sbjct: 181 EPYNATLSIHQLVENSDATFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTTCL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RFPGQLNSDLRKLAVN++PFPRLHFFM+GFAPLTSRG+ +RA++VPELTQQ++D KNMM
Sbjct: 241 RFPGQLNSDLRKLAVNMVPFPRLHFFMIGFAPLTSRGAHSFRAVSVPELTQQIFDPKNMM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRG 360
AAD R+GRYLT SA++RGK+S KEV++Q+ NVQNKN++YFVEWIPNNV +++CDIPPRG
Sbjct: 301 AAADFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVMTALCDIPPRG 360
Query: 361 LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
L M+STFVGNSTSIQE+F+RV +QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
Sbjct: 361 LKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 420
Query: 421 EYQQYQ 426
EYQQYQ
Sbjct: 421 EYQQYQ 426
>AK110638
Length = 465
Score = 566 bits (1458), Expect = e-161, Method: Compositional matrix adjust.
Identities = 257/428 (60%), Positives = 333/428 (77%), Gaps = 2/428 (0%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTS-DLQLERVNVYYNEASC-GR 58
MRE++ GQ GNQI S FW+ + +EHG+D GRY G++ D QL +V V++ + G+
Sbjct: 1 MRELITFACGQAGNQISSAFWQCILNEHGLDGDGRYIGSNEDEQLAKVGVFFEPSGQEGK 60
Query: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
+VPR++ +DLEPGTMD++R+GP G++FRPDN++ G+SGAGNN++KG+YTEGAEL+D VLD
Sbjct: 61 YVPRSIQVDLEPGTMDTIRSGPLGKLFRPDNYINGESGAGNNFSKGYYTEGAELLDQVLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
V RKEAE D LQGFQ+ H ++K+REE+PDRM+ T+SV PSPKVSDT
Sbjct: 121 VARKEAEKTDMLQGFQLVHSLGGGTGSGLGTNLLTKLREEFPDRMLATWSVLPSPKVSDT 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYNATLS HQLVEN+D LDNEALYDIC RTL+ P++ DLN +IS MSG +
Sbjct: 181 VVEPYNATLSFHQLVENSDMTFCLDNEALYDICQRTLRTKNPTYSDLNSIISFAMSGCST 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRFPGQLNSDLRK+ VNL+PFPRLHFF GFAPL + GS+ Y++L EL Q +D KN
Sbjct: 241 TLRFPGQLNSDLRKMGVNLVPFPRLHFFTTGFAPLVAPGSKAYQSLKTSELIAQGYDPKN 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
+M A DPRHG+YLT +A+FRG ++ ++V+ +M N++ KN + FVEWIPNNV +S+CDI P
Sbjct: 301 IMAAIDPRHGKYLTVAAIFRGNVNARDVENEMYNLREKNPAGFVEWIPNNVLTSLCDIAP 360
Query: 359 RGLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDL 418
L M++TF+ N+TSIQE+F+R +QF+ MFRRKAFLHWYTGEGMDEMEFTEAESN+ DL
Sbjct: 361 PQLKMSATFIANTTSIQELFKRTHDQFSLMFRRKAFLHWYTGEGMDEMEFTEAESNLMDL 420
Query: 419 VSEYQQYQ 426
++EYQQY+
Sbjct: 421 IAEYQQYE 428
>Os07g0574800 Tubulin alpha-1 chain
Length = 450
Score = 367 bits (943), Expect = e-102, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 264/434 (60%), Gaps = 10/434 (2%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCGR 58
MREI+ I GQ G Q+G+ WE+ C EHGI+P G + + + + N +++E G+
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRA+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
VRK A+NC LQGF V + + ++ +Y + L F+++PSP+VS
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + L+VPE+T +++ +
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 359 R--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
+ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQ 424
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>AK106047
Length = 451
Score = 365 bits (938), Expect = e-101, Method: Compositional matrix adjust.
Identities = 169/434 (38%), Positives = 257/434 (59%), Gaps = 10/434 (2%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLE--RVNVYYNEASCGR 58
MRE+L I GQ G Q+G+ WE+ C EHGI P G + +E N +++E G+
Sbjct: 1 MREVLSIHIGQAGVQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGK 60
Query: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF + H + ++ +Y + L ++V+PSP+VS
Sbjct: 121 RIRKLADNCTGLQGFCIYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D +LDNEA+YD+C R L + P++ +LN L+ +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAAMLDNEAMYDLCRRNLDIERPTYTNLNRLVGQVVSSLTA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN D+ + NL+P+PR+HF + FAP+ S + L+V E+T ++ +
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFVLTSFAPVISAEKAYHEQLSVAEITNAAFEPAS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
M+ DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MLTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 359 R--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
+ A + NST+I E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQ 424
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>Os11g0247300 Alfa-tubulin
Length = 451
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 261/434 (60%), Gaps = 10/434 (2%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQL--ERVNVYYNEASCGR 58
MRE + I GQ G Q+G+ WE+ C EHGI P G+ G + + N +++E G+
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V + + ++ +Y + L F+V+PSP+VS +
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S +T
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++ +
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K + PP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 359 R--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
+ A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQ 424
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 362 bits (928), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/437 (39%), Positives = 261/437 (59%), Gaps = 16/437 (3%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGID-----PTGRYAGTSDLQLERVNVYYNEAS 55
MRE + I GQ G Q+G+ WE+ C EHGI P+ R G D + N +++E
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGD---DAFNTFFSETG 57
Query: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
G+ VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 58 AGKHVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDL 117
Query: 116 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKV 175
LD +RK A+NC LQGF V + + ++ +Y + L F+V+PSP+V
Sbjct: 118 CLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQV 177
Query: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
S +VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN L+S +S
Sbjct: 178 STSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
Query: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
+T LRF G LN D+ + NL+P+PR+HF + +AP+ S + L+V E+T ++
Sbjct: 238 LTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFE 297
Query: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
+MM DPRHG+Y+ M+RG + K+V+ + ++ K + FV+W P K +
Sbjct: 298 PSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINY 357
Query: 356 IPPR--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
PP + A + NSTS+ E+F R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 358 QPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGE 417
Query: 408 FTEAESNMNDLVSEYQQ 424
F+EA ++ L +Y++
Sbjct: 418 FSEAREDLAALEKDYEE 434
>Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 449
Score = 358 bits (919), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 165/434 (38%), Positives = 263/434 (60%), Gaps = 10/434 (2%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAG--TSDLQLERVNVYYNEASCGR 58
MREI+ I GQ G Q+G+ WE+ C EHGI P G T + + N +++E S G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
Query: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
VPRA+ +DLEP +D V+TGPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
Query: 119 VVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDT 178
+RK A+NC LQGF V + + ++ +Y + L F+++PSP++S
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
Query: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
Query: 359 RG--------LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
+ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 411 AESNMNDLVSEYQQ 424
A ++ L +Y++
Sbjct: 421 AREDLAALEKDYEE 434
>AK067478
Length = 453
Score = 350 bits (897), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 167/437 (38%), Positives = 256/437 (58%), Gaps = 16/437 (3%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYA-----GTSDLQLERVNVYYNEAS 55
MRE + I GQ G Q+G+ WE+ C EH I P G G+SD + N +++E
Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHNITPDGTMPSDTTLGSSD---DSFNTFFSETG 57
Query: 56 CGRFVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDS 115
GR VPRAV +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D
Sbjct: 58 AGRHVPRAVYVDLEPTVVDEVRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 117
Query: 116 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKV 175
VLD +R+ ++ C LQGF + H + ++ +Y + L F+++P+P+V
Sbjct: 118 VLDRIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQV 177
Query: 176 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 235
S VVEPYN+ L+ H +E++D ++DNEA+YDIC R L + P++ +LN LI +S
Sbjct: 178 STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSS 237
Query: 236 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWD 295
+T LRF G LN DL + NL+P+PR+HF +V +AP+ S + LTV E+T ++
Sbjct: 238 ITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVSEITNSCFE 297
Query: 296 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 355
N M DPRHG+Y+ ++RG + K+V+ + ++ K S FV+W P K +
Sbjct: 298 PSNQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINY 357
Query: 356 IPPR--------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEME 407
PP + A + N+T+I E + R+ +F M+ ++AF+HWY GEGM+E E
Sbjct: 358 QPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGE 417
Query: 408 FTEAESNMNDLVSEYQQ 424
F+EA ++ L +Y++
Sbjct: 418 FSEAREDLAALEKDYEE 434
>AK105538
Length = 449
Score = 347 bits (889), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 166/432 (38%), Positives = 255/432 (59%), Gaps = 8/432 (1%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MRE++ I GQ G Q+G W++ C EHGI P G E +++E G++V
Sbjct: 1 MREVISIHVGQAGVQMGQSCWQLYCLEHGIQPDGTMPSDKQPGDESFTTFFSETGTGQYV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PR+V++DLEP +D +RTG Y Q+F P + G+ A NN+A+GHYT G E +D+V+D +
Sbjct: 61 PRSVMVDLEPTVVDEIRTGTYRQLFHPAGLISGKEDAANNYARGHYTVGKENVDTVVDRL 120
Query: 121 RKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSPKVSDTVV 180
K AEN LQGF + + ++ +Y +M L F+V+P+P+V+ VV
Sbjct: 121 GKIAENSSGLQGFLFFNSIGGGTGSGFTSLLMERLSVDYGKKMKLQFAVYPAPEVATAVV 180
Query: 181 EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL 240
EPYNA L+ H +E++D ++DNEA+Y +C + L + PS+ +LN L+S +S +T L
Sbjct: 181 EPYNAVLTSHTTMEHSDCAFMVDNEAIYALCQKKLDVPRPSYLNLNRLVSQAVSSITASL 240
Query: 241 RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMM 300
RF G LN DL + NL+P+PR+HF +V +AP+ S + LTV ELT ++A N M
Sbjct: 241 RFDGALNVDLNEFQTNLVPYPRIHFPLVTYAPIISAEKAHHENLTVGELTNSCFEATNQM 300
Query: 301 CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPR- 359
DPR G+Y+ +FRG + K+V+ + ++NK S FV+W P K + PP
Sbjct: 301 VKCDPRMGKYMACCLLFRGDVVPKDVNNAIAVIKNKRSIQFVDWCPTGFKVGINYQPPTV 360
Query: 360 -------GLSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 412
++ A + N+T+I E + RV+ +F M+ ++AF+HWY GEGM+E EFTEA
Sbjct: 361 VPNGDLAKVNRAVCMLSNTTAIAEAWARVNHKFDLMYAKRAFVHWYVGEGMEEGEFTEAR 420
Query: 413 SNMNDLVSEYQQ 424
++ L +Y++
Sbjct: 421 EDLAALEKDYEE 432
>Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)
Length = 469
Score = 271 bits (694), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 243/438 (55%), Gaps = 17/438 (3%)
Query: 2 REILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVP 61
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++P
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
Query: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
RA+L+DLEP ++ ++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
Query: 120 VRKEAENCDCLQGFQVCHXXXXXXXXXXXXXXISKIREEYPDRMMLTFSVFPSP-KVSDT 178
+ +EA+ D L+GF +CH + + + Y +++ T+SVFP+ + SD
Sbjct: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
Query: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T
Sbjct: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
Query: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
Query: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
Query: 353 VCDIPPRGLS---MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
+ P + ++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
Query: 406 MEFTEAESNMNDLVSEYQ 423
EF E+ + LV EY+
Sbjct: 422 SEFDESREIIESLVDEYK 439
>Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin)
Length = 133
Score = 268 bits (685), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 124/132 (93%), Positives = 127/132 (96%)
Query: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFV 60
MREILHIQGGQCGNQIG+KFWEVVC EHGID TGRY G SDLQLERVNVYYNEASCGRFV
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFV 60
Query: 61 PRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV 120
PRAVLMDLEPGTMDSVR+GPYG IFRPDNFVFGQSGAGNNWAKGHYTEGAELID+VLDVV
Sbjct: 61 PRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVV 120
Query: 121 RKEAENCDCLQG 132
RKEAENCDCLQG
Sbjct: 121 RKEAENCDCLQG 132
>Os06g0169600
Length = 107
Score = 75.5 bits (184), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/97 (50%), Positives = 53/97 (54%), Gaps = 24/97 (24%)
Query: 152 ISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNAT---LSVHQL-VENADECMVLDNEAL 207
ISKIREEYPDRMMLTFS SP + Y LS+ L +ENA ECMV+
Sbjct: 28 ISKIREEYPDRMMLTFSEKFSPH--QRFLIHYGGAAHYLSISLLRLENAIECMVI----- 80
Query: 208 YDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPG 244
GDLNHLISATMSGVTCC FP
Sbjct: 81 -------------MIGDLNHLISATMSGVTCCQLFPA 104
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 13,936,263
Number of extensions: 543653
Number of successful extensions: 1011
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 991
Number of HSP's successfully gapped: 20
Length of query: 444
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 340
Effective length of database: 11,605,545
Effective search space: 3945885300
Effective search space used: 3945885300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)