BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os05g0156600 Os05g0156600|AK102557
(469 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubu... 982 0.0
AK110204 288 5e-78
Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin) 278 6e-75
Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin) 278 7e-75
Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta su... 278 9e-75
Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin) 274 9e-74
Os05g0413200 Beta-tubulin 273 2e-73
Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin) 273 2e-73
AK109162 272 3e-73
Os06g0671900 Similar to Beta-tubulin 267 1e-71
AK110638 244 1e-64
Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubu... 234 8e-62
AK105538 227 2e-59
Os07g0574800 Tubulin alpha-1 chain 226 2e-59
Os11g0247300 Alfa-tubulin 225 7e-59
Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubu... 224 1e-58
AK067478 223 2e-58
AK106047 222 5e-58
Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin) 108 9e-24
>Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)
Length = 469
Score = 982 bits (2539), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/469 (100%), Positives = 469/469 (100%)
Query: 1 MPREIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHY 60
MPREIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHY
Sbjct: 1 MPREIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHY 60
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQGEQVVDDIMD 120
IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQGEQVVDDIMD
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQGEQVVDDIMD 120
Query: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSD 180
MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSD
Sbjct: 121 MIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSD 180
Query: 181 VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAST 240
VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAST
Sbjct: 181 VVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAST 240
Query: 241 TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQT 300
TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQT
Sbjct: 241 TTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQT 300
Query: 301 KNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
KNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV
Sbjct: 301 KNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQV 360
Query: 361 ALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDND 420
ALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDND
Sbjct: 361 ALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDND 420
Query: 421 LSEFDESREIIESLVDEYKACESPDYIKWGMEDAGEANVAAALDSKLVV 469
LSEFDESREIIESLVDEYKACESPDYIKWGMEDAGEANVAAALDSKLVV
Sbjct: 421 LSEFDESREIIESLVDEYKACESPDYIKWGMEDAGEANVAAALDSKLVV 469
>AK110204
Length = 447
Score = 288 bits (738), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ +Q GQCGNQ+G FW+ + EHG+ G+ + +R +V+F +A Y+P
Sbjct: 2 REIVHLQTGQCGNQVGAAFWQTISGEHGLDSSGVYNGTSDLQLERMNVYFNEASGNKYVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+LVDLEP ++ ++ + L+ +N + GAGNNWA G Y +G ++VD ++D+
Sbjct: 62 RAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDQVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ REA+G D L+GF + HS+ GGTG+GMG+ L+ + + + +++ T+SV P+ + SD
Sbjct: 120 VRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREGFPDRMMATFSVLPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L N+D +DN AL I + L L+NP++ N LVS VMS TT
Sbjct: 179 VVEPYNATLSIHQLVENSDATFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTT 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +++P PR HF M G+ PLT R + R +V ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNMVPFPRLHFFMIGFAPLT-SRGAHSFRAVSVPELTQQIFDPK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ RN +Y++ I +G+V +V + ++ ++ + F+EW P ++ A
Sbjct: 298 NMMAAADFRN-----GRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVMTA 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
L P ++S + N TSI+ LF + Q+ + +++AFL Y E D
Sbjct: 353 LCDIPP---RGLKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVSEYQ 423
>Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin)
Length = 447
Score = 278 bits (711), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRFVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ +++ + ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L LA PTF N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P +++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPP---NGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVAEYQ 423
>Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin)
Length = 444
Score = 278 bits (711), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 257/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHG+ G + +R +V++ +A Y+P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLERINVYYNEASGGRYVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ +++ + ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L LA PTF N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P +++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPP---RGLKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVAEYQ 423
>Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)
Length = 446
Score = 278 bits (710), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 256/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHG+ G + Q +R +V+F +A ++P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLERINVYFNEASGGRHVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ +++ ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L L NP+F N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G + +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P + ++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPPVGLS---MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTS----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVAEYQ 423
>Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin)
Length = 447
Score = 274 bits (701), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 255/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLERVNVYYNEASCGRFVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ ++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P + ++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVSEYQ 423
>Os05g0413200 Beta-tubulin
Length = 444
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 255/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++P
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAGTSDLQLERVNVYYNEASCGRFVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ ++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P + ++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPPRGLS---MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVSEYQ 423
>Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin)
Length = 447
Score = 273 bits (699), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 155/438 (35%), Positives = 255/438 (58%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A ++P
Sbjct: 2 REILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERVNVYYNEASCGRFVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ ++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L L P+F N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P + ++ + N TSI+ +F + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPPRGLS---MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVSEYQ 423
>AK109162
Length = 444
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 249/438 (56%), Gaps = 17/438 (3%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ + EHGI G + +R +V+F +A Y+P
Sbjct: 2 REIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYFNEATGGKYVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+LVDLEP ++ +++ + ++ +N + GAGNNWA G Y +G ++VD ++D+
Sbjct: 62 RAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF L HS+ GGTGSGMG+ L+ + + Y +++ T+SV P+ + SD
Sbjct: 120 VRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L N D +DN AL I L L PT+ N LVS MS TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N DL L +++P PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLT-SRGSQQYRALTVPELTQQMFDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M + R+ +Y+++ I +G + +V E + ++ + F+EW P +++ A
Sbjct: 298 NMMAACDPRH-----GRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTA 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P ++S + N T+I+ LF + Q+ + +++AFL Y E D
Sbjct: 353 VCDIPP---RGLKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTG----EGMDE 405
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 406 MEFTEAESNMNDLVSEYQ 423
>Os06g0671900 Similar to Beta-tubulin
Length = 433
Score = 267 bits (682), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 156/438 (35%), Positives = 251/438 (57%), Gaps = 30/438 (6%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + +R +V++ +A Y+P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLERINVYYNEASGGRYVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ +++ Y ++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQ--SGAGNNWAKGHYTEGAELIDSVLDV 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ +EA+ D L+GF +CHS+ GGTGSGMG+ L+ + + Y +++ T+SVFP+ + SD
Sbjct: 120 VRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSP-KVSDT 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN+ L++ +L NAD +VLDN AL I L LA PTF N L+S MS T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
LR+PG +N+DL L +LIP PR HF M G+ PLT R R TV ++ +++ K
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLT-SRGSQQYRALTVPELTQQMWDAK 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N+M ++ R+ +Y++ + +G++ +V E + ++ + F+EW P +++ +
Sbjct: 298 NMMCAADPRH-----GRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSS 352
Query: 362 LSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDL 421
+ P +++ + N TSI+ + ++AFL Y E D
Sbjct: 353 VCDIPP---IGLKMASTFIGNSTSIQEM-------------RKAFLHWYTG----EGMDE 392
Query: 422 SEFDESREIIESLVDEYK 439
EF E+ + LV EY+
Sbjct: 393 MEFTEAESNMNDLVAEYQ 410
>AK110638
Length = 465
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 156/449 (34%), Positives = 247/449 (55%), Gaps = 29/449 (6%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLL------EDFATQGGDRKDVFFYQAD 56
RE+IT GQ GNQI FW+ + EHG+ DG E A G VFF +
Sbjct: 2 RELITFACGQAGNQISSAFWQCILNEHGLDGDGRYIGSNEDEQLAKVG-----VFFEPSG 56
Query: 57 DQ-HYIPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYH-QGEQV 114
+ Y+PR++ VDLEP ++ I++ L+ +N E GAGNN++ GY+ +G ++
Sbjct: 57 QEGKYVPRSIQVDLEPGTMDTIRSGPLGKLFRPDNYINGE--SGAGNNFSKGYYTEGAEL 114
Query: 115 VDDIMDMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN 174
+D ++D+ +EA+ +D L+GF L HS+ GGTGSG+G+ LL L + + +++ T+SV P+
Sbjct: 115 LDQVLDVARKEAEKTDMLQGFQLVHSLGGGTGSGLGTNLLTKLREEFPDRMLATWSVLPS 174
Query: 175 QMETSDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVST 234
+ SD VV+PYN+ L+ +L N+D LDN AL I L NPT++ NS++S
Sbjct: 175 P-KVSDTVVEPYNATLSFHQLVENSDMTFCLDNEALYDICQRTLRTKNPTYSDLNSIISF 233
Query: 235 VMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVM 294
MS +TTLR+PG +N+DL + +L+P PR HF TG+ PL V + +++
Sbjct: 234 AMSGCSTTLRFPGQLNSDLRKMGVNLVPFPRLHFFTTGFAPL-VAPGSKAYQSLKTSELI 292
Query: 295 RRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWG 354
+ KNIM + R+ KY+++ I +G V+ V + +RE+ F+EW
Sbjct: 293 AQGYDPKNIMAAIDPRH-----GKYLTVAAIFRGNVNARDVENEMYNLREKNPAGFVEWI 347
Query: 355 PASIQVALSRKSPYVQTTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFP 414
P ++ +L +P ++S +AN TSI+ LF + Q+ + +++AFL Y
Sbjct: 348 PNNVLTSLCDIAP---PQLKMSATFIANTTSIQELFKRTHDQFSLMFRRKAFLHWYTG-- 402
Query: 415 MFEDNDLSEFDESREIIESLVDEYKACES 443
E D EF E+ + L+ EY+ ES
Sbjct: 403 --EGMDEMEFTEAESNLMDLIAEYQQYES 429
>Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 449
Score = 234 bits (598), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 147/446 (32%), Positives = 253/446 (56%), Gaps = 23/446 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRK--DVFFYQADDQHY 60
REII+I +GQ G Q+G W+ CLEHGI DGL+ T G R + FF + +
Sbjct: 2 REIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGKH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIM 119
+PRAL VDLEP VI+ ++ YR L++ E + + A NN+A G Y G +VVD +
Sbjct: 62 VPRALFVDLEPTVIDEVKTGPYRQLFHPEQLI--SYKEDAANNFARGHYTVGREVVDLCL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
D + + AD L+GF++ +++ GGTGSG+GS LLE L+ Y +K ++++P+ + S
Sbjct: 120 DRLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSP-QIS 178
Query: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
VV+PYNS+L+ L + D VV+LDN A+ I L + PT+ N L+S V+S+
Sbjct: 179 TAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSL 238
Query: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRLL 298
TT+LR+ G +N D+ +L+P PR HF+++ Y P ++VE+ + + +V ++ +
Sbjct: 239 TTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFH--EQHSVPEITNSVF 296
Query: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
+ ++M R+ KY++ + +G+V P V+ ++ I+ R+ V F++W P
Sbjct: 297 EPASVMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGF 351
Query: 359 QVALSRKSPYVQ-----TTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKF 413
+ ++ + P R + M++N+T++ +FS+ +++ + K+AF+ Y
Sbjct: 352 KCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWY--- 408
Query: 414 PMFEDNDLSEFDESREIIESLVDEYK 439
+ E + EF E+RE + +L +Y+
Sbjct: 409 -VGEGMEEGEFSEAREDLAALEKDYE 433
>AK105538
Length = 449
Score = 227 bits (578), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/443 (31%), Positives = 240/443 (54%), Gaps = 19/443 (4%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
RE+I+I VGQ G Q+G W+ CLEHGI DG + G + FF + Y+P
Sbjct: 2 REVISIHVGQAGVQMGQSCWQLYCLEHGIQPDGTMPSDKQPGDESFTTFFSETGTGQYVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
R+++VDLEP V++ I+ YR L++ + + A NN+A G Y G++ VD ++D
Sbjct: 62 RSVMVDLEPTVVDEIRTGTYRQLFHPAGLISGKE--DAANNYARGHYTVGKENVDTVVDR 119
Query: 122 IDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDV 181
+ + A+ S L+GF+ +SI GGTGSG S L+E L+ Y KK+ ++V+P E +
Sbjct: 120 LGKIAENSSGLQGFLFFNSIGGGTGSGFTSLLMERLSVDYGKKMKLQFAVYPAP-EVATA 178
Query: 182 VVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTT 241
VV+PYN++LT ++DC ++DN A+ + ++L + P++ N LVS +S+ T
Sbjct: 179 VVEPYNAVLTSHTTMEHSDCAFMVDNEAIYALCQKKLDVPRPSYLNLNRLVSQAVSSITA 238
Query: 242 TLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTK 301
+LR+ G +N DL +L+P PR HF + Y P+ + + TV ++ +
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLVTYAPIISAEKAHH-ENLTVGELTNSCFEAT 297
Query: 302 NIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASIQVA 361
N MV R KY++ + +G+V P V+ ++ I+ ++ + F++W P +V
Sbjct: 298 NQMVKCDPR-----MGKYMACCLLFRGDVVPKDVNNAIAVIKNKRSIQFVDWCPTGFKVG 352
Query: 362 LSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKFPMF 416
++ + P V ++ + ML+N T+I +++ +++ + K+AF+ Y M
Sbjct: 353 INYQPPTVVPNGDLAKVNRAVCMLSNTTAIAEAWARVNHKFDLMYAKRAFVHWYVGEGME 412
Query: 417 EDNDLSEFDESREIIESLVDEYK 439
E EF E+RE + +L +Y+
Sbjct: 413 E----GEFTEAREDLAALEKDYE 431
>Os07g0574800 Tubulin alpha-1 chain
Length = 450
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/446 (31%), Positives = 252/446 (56%), Gaps = 23/446 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQG--GDRKDVFFYQADDQHY 60
REII+I +GQ G Q+G W+ CLEHGI DG + T G D + FF + +
Sbjct: 2 REIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGKH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIM 119
+PRA+ VDLEP VI+ ++ YR L++ E + + A NN+A G Y G+++VD +
Sbjct: 62 VPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKED--AANNFARGHYTVGKEIVDLCL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
D + + AD L+GF++ +++ GGTGSG+GS LLE L+ Y KK ++++P+ + S
Sbjct: 120 DRVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSP-QVS 178
Query: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N L+S ++S+
Sbjct: 179 TAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSL 238
Query: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRLL 298
TT+LR+ G +N D+ +L+P PR HF+++ Y P ++ E+ + + +V ++ +
Sbjct: 239 TTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVPEITNAVF 296
Query: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
+ ++M R+ KY++ + +G+V P V+ ++ I+ ++ V F++W P
Sbjct: 297 EPSSMMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGF 351
Query: 359 QVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKF 413
+ ++ + P V ++ + M++N+T++ +FS+ +++ + K+AF+ Y
Sbjct: 352 KCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGE 411
Query: 414 PMFEDNDLSEFDESREIIESLVDEYK 439
M E EF E+RE + +L +Y+
Sbjct: 412 GMEE----GEFSEAREDLAALEKDYE 433
>Os11g0247300 Alfa-tubulin
Length = 451
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 254/447 (56%), Gaps = 25/447 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
+PRA+ VDLEP VI+ ++ +YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKED--AANNFARGHYTIGKEIVDLCL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QMET 178
D I + AD L+GF++ +++ GGTGSG+GS LLE L+ Y KK ++V+P+ Q+ T
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSA 238
S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+
Sbjct: 180 S--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
Query: 239 STTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRL 297
T +LR+ G +N D+ +L+P PR HF+++ Y P ++ E+ + + +V ++
Sbjct: 238 LTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVAEITNSA 295
Query: 298 LQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPAS 357
+ ++M R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 296 FEPSSMMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG 350
Query: 358 IQVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRK 412
+ ++ + P V ++ + M++N TS+ +FS+ +++ + K+AF+ Y
Sbjct: 351 FKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWY-- 408
Query: 413 FPMFEDNDLSEFDESREIIESLVDEYK 439
+ E + EF E+RE + +L +Y+
Sbjct: 409 --VGEGMEEGEFSEAREDLAALEKDYE 433
>Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 145/447 (32%), Positives = 254/447 (56%), Gaps = 25/447 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
RE I+I +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +
Sbjct: 2 RECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGKH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
+PRA+ VDLEP VI+ ++ YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 62 VPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKED--AANNFARGHYTIGKEIVDLCL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPN-QMET 178
D I + AD L+GF++ +++ GGTGSG+GS LLE L+ Y KK ++V+P+ Q+ T
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 179 SDVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSA 238
S VV+PYNS+L+ L + D V+LDN A+ I L + PT+ N LVS V+S+
Sbjct: 180 S--VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISS 237
Query: 239 STTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRL 297
T +LR+ G +N D+ +L+P PR HF+++ Y P ++ E+ + + +V ++
Sbjct: 238 LTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYH--EQLSVAEITNSA 295
Query: 298 LQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPAS 357
+ ++M R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 296 FEPSSMMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTG 350
Query: 358 IQVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRK 412
+ ++ + P V + ++ + M++N TS+ +FS+ +++ + K+AF+ Y
Sbjct: 351 FKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWY-- 408
Query: 413 FPMFEDNDLSEFDESREIIESLVDEYK 439
+ E + EF E+RE + +L +Y+
Sbjct: 409 --VGEGMEEGEFSEAREDLAALEKDYE 433
>AK067478
Length = 453
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 140/446 (31%), Positives = 243/446 (54%), Gaps = 23/446 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGG--DRKDVFFYQADDQHY 60
RE I+I VGQ G Q+G W+ CLEH I DG + T G D + FF + +
Sbjct: 2 RECISIHVGQAGVQMGNSCWELYCLEHNITPDGTMPSDTTLGSSDDSFNTFFSETGAGRH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
+PRA+ VDLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD ++
Sbjct: 62 VPRAVYVDLEPTVVDEVRTGVYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
D I R +D L+GF++ HS GGTGSG S L+E L+ Y KK ++++P + S
Sbjct: 120 DRIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAP-QVS 178
Query: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
VV+PYNS+LT ++DC ++DN A+ I L + PT+ N L+ ++S+
Sbjct: 179 TAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSI 238
Query: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRLL 298
T +LR+ G +N DL +L+P PR HF + Y P ++ E+ + + TV ++
Sbjct: 239 TASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYH--EQLTVSEITNSCF 296
Query: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
+ N MV R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 297 EPSNQMVKCDPRH-----GKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGF 351
Query: 359 QVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKF 413
+V ++ + P V ++ + ML+N T+I +++ +++ + K+AF+ Y
Sbjct: 352 KVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWY--- 408
Query: 414 PMFEDNDLSEFDESREIIESLVDEYK 439
+ E + EF E+RE + +L +Y+
Sbjct: 409 -VGEGMEEGEFSEAREDLAALEKDYE 433
>AK106047
Length = 451
Score = 222 bits (565), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 136/446 (30%), Positives = 248/446 (55%), Gaps = 23/446 (5%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQG--GDRKDVFFYQADDQHY 60
RE+++I +GQ G Q+G W+ CLEHGI DG + T G D + FF + +
Sbjct: 2 REVLSIHIGQAGVQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGKH 61
Query: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASGYHQ-GEQVVDDIM 119
+PRA+ +DLEP V++ ++ YR L++ E + + A NN+A G++ G+++VD +
Sbjct: 62 VPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKED--AANNYARGHYTIGKEIVDLCL 119
Query: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
D I + AD L+GF + H++ GGTGSG+G+ LLE L+ Y KK Y+V+P+ + S
Sbjct: 120 DRIRKLADNCTGLQGFCIYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSP-QVS 178
Query: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
VV+PYNS+L+ L + D +LDN A+ + L + PT+ N LV V+S+
Sbjct: 179 TAVVEPYNSVLSTHSLLEHTDVAAMLDNEAMYDLCRRNLDIERPTYTNLNRLVGQVVSSL 238
Query: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRLL 298
T +LR+ G +N D+ +L+P PR HF++T + P ++ E+ + + +V ++
Sbjct: 239 TASLRFDGALNVDITEFQTNLVPYPRIHFVLTSFAPVISAEKAYH--EQLSVAEITNAAF 296
Query: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
+ +++ R+ KY++ + +G+V P V+ ++ I+ ++ + F++W P
Sbjct: 297 EPASMLTKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGF 351
Query: 359 QVALSRKSPYVQTTHRVSGL-----MLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKF 413
+ ++ + P V ++ + M+AN T+I +F++ +++ + K+AF+ Y
Sbjct: 352 KCGINYQPPTVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWY--- 408
Query: 414 PMFEDNDLSEFDESREIIESLVDEYK 439
+ E + EF E+RE + +L +Y+
Sbjct: 409 -VGEGMEEGEFSEAREDLAALEKDYE 433
>Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin)
Length = 133
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/133 (38%), Positives = 87/133 (65%), Gaps = 3/133 (2%)
Query: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRKDVFFYQADDQHYIP 62
REI+ IQ GQCGNQIG +FW+ +C EHGI G + + +R +V++ +A ++P
Sbjct: 2 REILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLERVNVYYNEASCGRFVP 61
Query: 63 RALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIMDM 121
RA+L+DLEP ++ +++ Y +++ +N + GAGNNWA G Y +G +++D ++D+
Sbjct: 62 RAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQS--GAGNNWAKGHYTEGAELIDAVLDV 119
Query: 122 IDREADGSDSLEG 134
+ +EA+ D L+G
Sbjct: 120 VRKEAENCDCLQG 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.135 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,834,104
Number of extensions: 676961
Number of successful extensions: 1941
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1852
Number of HSP's successfully gapped: 19
Length of query: 469
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 365
Effective length of database: 11,605,545
Effective search space: 4236023925
Effective search space used: 4236023925
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 158 (65.5 bits)