BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0627000 Os04g0627000|AB101645
(784 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0627000 Similar to Roc1 1446 0.0
Os04g0569100 Similar to OCL1 homeobox protein 694 0.0
Os10g0575600 Homeodomain-related containing protein 566 e-161
Os02g0674800 Similar to OCL1 homeobox protein 540 e-153
Os01g0788800 Homeodomain-like containing protein 344 2e-94
Os08g0292000 Homeobox domain containing protein 289 6e-78
Os08g0187500 Similar to Roc1 273 4e-73
Os08g0136100 Similar to Roc1 263 4e-70
Os09g0526200 Similar to OCL3 protein 235 1e-61
Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-... 189 7e-48
Os06g0208100 Similar to Homeodomain protein HOX3 186 5e-47
Os01g0760800 Similar to Homeodomain protein 1 109 7e-24
Os07g0667200 100 5e-21
Os07g0426600 99 9e-21
Os03g0109400 Homeobox domain containing protein 74 5e-13
Os10g0480200 Similar to Rolled leaf1 72 2e-12
>Os04g0627000 Similar to Roc1
Length = 784
Score = 1446 bits (3744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 713/784 (90%), Positives = 713/784 (90%)
Query: 1 MMIPARHMPSMIGRNXXXXXXXXXXXXXQPNLLDNXXXXXXXXXXXXXXXLLDQIPATTA 60
MMIPARHMPSMIGRN QPNLLDN LLDQIPATTA
Sbjct: 1 MMIPARHMPSMIGRNGAAYGSSSALSLSQPNLLDNHQFQQAFQHQQQQHHLLDQIPATTA 60
Query: 61 ESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEME 120
ESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEME
Sbjct: 61 ESGDNMIRSRASDPLGGDEFESKSGSENVDGVSVDDQDPNQRPRKKRYHRHTQHQIQEME 120
Query: 121 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRA 180
AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRA
Sbjct: 121 AFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRA 180
Query: 181 ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMV 240
ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMV
Sbjct: 181 ENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMV 240
Query: 241 PFPVLSNPMAAAASRAPLDLPVAPYXXXXXXXXXXXXXXXXXXVQSEVDKPMIVELAVAA 300
PFPVLSNPMAAAASRAPLDLPVAPY VQSEVDKPMIVELAVAA
Sbjct: 241 PFPVLSNPMAAAASRAPLDLPVAPYGVPGDMFGGGGAGELLRGVQSEVDKPMIVELAVAA 300
Query: 301 MEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSA 360
MEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSA
Sbjct: 301 MEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSA 360
Query: 361 VVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSP 420
VVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSP
Sbjct: 361 VVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSP 420
Query: 421 LVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTW 480
LVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTW
Sbjct: 421 LVPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTW 480
Query: 481 VEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSS 540
VEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSS
Sbjct: 481 VEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSS 540
Query: 541 EGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLN 600
EGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLN
Sbjct: 541 EGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLN 600
Query: 601 AATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVXXX 660
AATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRV
Sbjct: 601 AATSFWLPVPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVNSS 660
Query: 661 XXXXXXMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAH 720
MLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAH
Sbjct: 661 NSNQSNMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAH 720
Query: 721 XXXXXXXXXXXXXXXXLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE 780
LLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE
Sbjct: 721 DGGDGDGGVGVGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE 780
Query: 781 SNPQ 784
SNPQ
Sbjct: 781 SNPQ 784
>Os04g0569100 Similar to OCL1 homeobox protein
Length = 806
Score = 694 bits (1790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/758 (48%), Positives = 492/758 (64%), Gaps = 57/758 (7%)
Query: 68 RSRASDPLGGDEFESKSGSENVDGVSVDDQDP--------------NQRPRKKRYHRHTQ 113
R++A D L + S+SGS+++D VS D N RKKRYHRHT
Sbjct: 54 RAKARDALEVENEMSRSGSDHLDVVSCGDAGGGGGDDDDDEDAEHGNPPKRKKRYHRHTP 113
Query: 114 HQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRS 173
QIQE+EA FKECPHPD+KQR ELS+ LGLEP QVKFWFQN+RTQMK Q ERHENS L+
Sbjct: 114 QQIQELEAMFKECPHPDEKQRAELSKRLGLEPRQVKFWFQNRRTQMKMQLERHENSLLKQ 173
Query: 174 DNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAK 233
+N+KLR+EN+ +EA S+A C CGGPA LGE+S +EHHLR+ENARL++E+ R+ A+AAK
Sbjct: 174 ENDKLRSENLSIREATSNAVCVGCGGPAMLGEVSLEEHHLRVENARLKDELSRVCALAAK 233
Query: 234 YVGKPM-------------VPFPVLSNPMAAAASRAPLDLPVAPYXXXXXXXXXX----- 275
++GK + VP L + S +P++
Sbjct: 234 FLGKSISVMAPPQMHQPHPVPGSSLELAVGGIGSMPSATMPISTITDFAGAMSSSMGTVI 293
Query: 276 --XXXXXXXXVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSE 333
+ +DK + +ELA++AM+ELV+MAQ+ +PLW + ++ A E+L+
Sbjct: 294 TPMKSEAEPSAMAGIDKSLFLELAMSAMDELVKMAQMGDPLWIPGASVPSSPAK-ESLNF 352
Query: 334 EEYARMFPRGLGPKQYGLRSEASRDSAVVIMTH-ANLVEILMDANQYAAVFSNIVSRAIT 392
EEY FP +G K G SEASR+S +VI+ A LVE LMD +++ +FS ++++A T
Sbjct: 353 EEYLNTFPPCIGVKPEGYVSEASRESGIVIIDDGAALVETLMDERRWSDMFSCMIAKAST 412
Query: 393 LEVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSL- 451
E +STGVAG+ NGAL +M E QV SPLVP RE F+R+ KQ ADG WAVVDVS D L
Sbjct: 413 TEEISTGVAGSRNGALLLMQAELQVLSPLVPIREVKFLRFSKQLADGVWAVVDVSADELM 472
Query: 452 --------RPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGL 503
+ + CRR PSGC++Q+ PNG+ KVTWVEH E D+ SVH +Y+ L+ SGL
Sbjct: 473 RDQGITSASSTANMNCRRLPSGCVLQDTPNGFVKVTWVEHTEYDEASVHPLYRPLLRSGL 532
Query: 504 AFGARRWVGTLDRQCERLASVMAS-NIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVT 562
A GA RW+ TL RQCE LA +M+S +P +D I EG++SMLKLA RM +FC GV+
Sbjct: 533 ALGAGRWIATLQRQCECLALLMSSIALPENDSSAI-HPEGKRSMLKLARRMTDNFCAGVS 591
Query: 563 ASVAHQWTT---LSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLR 619
S +W+ L+G+ EDV VM RKSVD+PG PPG+VL+AATS W+PV P+R+F+FL
Sbjct: 592 TSSTREWSKLVGLTGNIGEDVHVMARKSVDEPGTPPGVVLSAATSVWMPVMPERLFNFLH 651
Query: 620 DESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVXXXXXXXXXMLILQESCTDASG 679
++ R+EWDILSNGG +QE+ IA G+ GN V LL+ MLILQE+C DASG
Sbjct: 652 NKGLRAEWDILSNGGPMQEVTSIAKGQQNGNTVCLLKASPTKDKQNSMLILQETCADASG 711
Query: 680 SYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPDGPAHXXXXXXXXXXXXXXXXLLT 739
S V+YAPVD+ AM++V++GGD VALLPSGFAILP GP+ LLT
Sbjct: 712 SMVVYAPVDIPAMHLVMSGGDSSCVALLPSGFAILPAGPS-------IGADHKMGGSLLT 764
Query: 740 VAFQILVDSVPTAKLSLGSVATVNSLIACTVERIKAAV 777
VAFQIL +S P+AKL++ SV TV++LI+CT+++IK A+
Sbjct: 765 VAFQILANSQPSAKLTVESVETVSNLISCTIKKIKTAL 802
>Os10g0575600 Homeodomain-related containing protein
Length = 882
Score = 566 bits (1460), Expect = e-161, Method: Compositional matrix adjust.
Identities = 326/794 (41%), Positives = 458/794 (57%), Gaps = 107/794 (13%)
Query: 79 EFESKSGSENVDGV-SVDDQDPNQRP----------------------RKKRYHRHTQHQ 115
E SGS ++DG+ S D D + +P +KKRYHRHT HQ
Sbjct: 86 ELSGGSGSAHLDGLLSFADVDDDHKPQHSGHDQPPDAAQPSGAAGGNAKKKRYHRHTAHQ 145
Query: 116 IQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDN 175
IQ+MEA FKECPHPDDKQR +LS+ELGL+P QVKFWFQN+RTQMK Q +R +N LR++N
Sbjct: 146 IQQMEALFKECPHPDDKQRLKLSQELGLKPRQVKFWFQNRRTQMKAQQDRADNVILRAEN 205
Query: 176 EKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYV 235
E L+++N R + A+ + CPNCG A L +MS++E LRIENARL++E+DR++ IA +Y
Sbjct: 206 ENLKSDNFRLQAAIRNVVCPNCGHAAVLADMSYEEQQLRIENARLKDELDRLACIATRYG 265
Query: 236 G----KPMV----------PFPVLSNPM--------AAAASRAPL----DLPVAPYXXXX 269
G +P++ P PVL P+ A +AP+ DL + P
Sbjct: 266 GGGGRQPVLSTSALSCISAPPPVLMPPLDLDMNVYSRHFAEQAPVMGCGDL-IPPPVVPQ 324
Query: 270 XXXXXXXXXXXXXXVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAME 329
VQ E DK ++V+LA A ++L RM + EPLW E
Sbjct: 325 HDGAAAYMGAMMAPVQ-EQDKQLVVDLAATAADQLARMCRAGEPLW-------VRQRGAE 376
Query: 330 TLSEEEYARMFPRGLGPKQYG-----LRSEASRDSAVVIMTHANLVEILMDANQYAAVFS 384
++ EE+ARMF + + G R+E +RD+AVVIM NLV+ +DAN++ +F
Sbjct: 377 VMAVEEHARMFSWPVDGAKQGDGGAVARAEGTRDNAVVIMNSINLVDAFLDANKWMELFP 436
Query: 385 NIVSRAITLEVLSTGVAGNY--NGALQVMSVEFQVPSPLVPTRESYFVRYCKQNAD-GTW 441
+IV +A T+++++ G A + +G L +M E Q SPLV RE F RYC NAD G+W
Sbjct: 437 SIVCKARTIQIINHGAASGHLGSGTLLLMQAEVQFLSPLVAAREVVFFRYCVHNADEGSW 496
Query: 442 AVVDVSL----DSLRPSPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEV--DDRSVHNIY 495
A+VD + L + V++CRRRPSGC+IQ+MPNGYS+V WVEH+E+ +++ + ++
Sbjct: 497 AIVDFPAEGFEEGLLQASVVRCRRRPSGCIIQDMPNGYSRVVWVEHMEMVGEEKPLQPVF 556
Query: 496 KLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVV 555
+ V SG AFGA RW+ L RQCERLAS +A NI +D+GVI + E R +M+KL++RM+
Sbjct: 557 RDYVASGAAFGATRWLSILQRQCERLASELARNI--ADLGVIRTPEARTNMMKLSQRMIT 614
Query: 556 SFCGGVTASVAHQWTTLSGSGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVF 615
+FC ++AS WT LS S + +RV TRK+ +PG+P G++L A ++ WLP ++VF
Sbjct: 615 TFCANISASGTQSWTALSDSTQDTIRVTTRKNT-EPGQPSGVILTAVSTSWLPFTHQQVF 673
Query: 616 DFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGNCVSLLRVXXXXXXXXXM-LILQESC 674
+ L DE R + +ILSNGG + E+AHIANG NC+SLLR+ + L+LQES
Sbjct: 674 ELLADEQQRCQLEILSNGGSLHEVAHIANGSHPRNCISLLRINAASNSSQNVELLLQESS 733
Query: 675 TDA-SGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSGFAILPD---GPAHXXXXXXXXXX 730
T GS V++A VDV A+ V ++G DP Y+ LLP GFAI P PA
Sbjct: 734 THPDGGSLVVFATVDVDAIQVTMSGEDPSYIPLLPLGFAIFPATSPSPAAAPTISSSTTT 793
Query: 731 XXXXXX---------------------------LLTVAFQILVDSVPTAKLSLGSVATVN 763
LLTV Q+L +VP+AKL+L SV +N
Sbjct: 794 TTGNGNGETSSTPPRNSSSNNNNADELLPPNGCLLTVGMQVLASAVPSAKLNLSSVTAIN 853
Query: 764 SLIACTVERIKAAV 777
S + + +I AA+
Sbjct: 854 SHVCNAIHQITAAL 867
>Os02g0674800 Similar to OCL1 homeobox protein
Length = 804
Score = 540 bits (1390), Expect = e-153, Method: Compositional matrix adjust.
Identities = 276/503 (54%), Positives = 358/503 (71%), Gaps = 22/503 (4%)
Query: 288 VDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPK 347
+D+ + +ELA++AM+ELV+MAQ+D+PLW A P + + E L+ EEY F +G K
Sbjct: 307 IDRSVFLELAISAMDELVKMAQMDDPLWVPALP---GSPSKEVLNFEEYLHSFLPCIGMK 363
Query: 348 QYGLRSEASRDSAVVIMTHA-NLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNG 406
G SEASR+S +VI+ ++ LVE LMD +++ +FS ++++A LE +STG+AG+ NG
Sbjct: 364 PAGYVSEASRESGLVIIDNSLALVETLMDERRWSDMFSCMIAKATVLEEVSTGIAGSRNG 423
Query: 407 ALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSL------RPSPV---L 457
AL +M E QV SPLVP RE F+R+CKQ A+G WAVVDVS+D L +P +
Sbjct: 424 ALLLMKAELQVLSPLVPIREVTFLRFCKQLAEGAWAVVDVSIDGLVRDHNSGTAPTGGNV 483
Query: 458 KCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQ 517
KCRR PSGC++Q+ PNGY KVTWVEH E D+ SVH +Y+ L+ SGLAFGARRW+ TL RQ
Sbjct: 484 KCRRVPSGCVMQDTPNGYCKVTWVEHTEYDEASVHQLYRPLLRSGLAFGARRWLATLQRQ 543
Query: 518 CERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTL---SG 574
CE LA +M+S T++ S EG++SMLKLA RM +FC GV+AS A +W+ L +G
Sbjct: 544 CECLAILMSSATVTANDSTAISQEGKRSMLKLARRMTENFCAGVSASSAREWSKLDGATG 603
Query: 575 SGAEDVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSNGG 634
S EDVRVM RKSV +PG PPG+VL+AATS W+PV P+++F+FLRDE R+EWDILSNGG
Sbjct: 604 SIGEDVRVMARKSVSEPGEPPGVVLSAATSVWVPVAPEKLFNFLRDEQLRAEWDILSNGG 663
Query: 635 IVQEMAHIANGRDQGNCVSLLRVXXXXXXXXXMLILQESCTDASGSYVIYAPVDVVAMNV 694
+QEM IA G+ GN VSLLR MLILQE+CTDASGS V+YAPVD+ AM +
Sbjct: 664 PMQEMTQIAKGQRDGNSVSLLRASAVSANQSSMLILQETCTDASGSIVVYAPVDIPAMQL 723
Query: 695 VLNGGDPDYVALLPSGFAILPDGPAHXXXXXXXXXXXXXXXXLLTVAFQILVDSVPTAKL 754
V+NGGD YVALLPSGFAILPDGP LLTVAFQILV++ PTAKL
Sbjct: 724 VMNGGDSTYVALLPSGFAILPDGP------RIGATGYETGGSLLTVAFQILVNNQPTAKL 777
Query: 755 SLGSVATVNSLIACTVERIKAAV 777
++ SV TVN+LI+CT+++IK A+
Sbjct: 778 TVESVETVNNLISCTIKKIKTAL 800
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/166 (60%), Positives = 130/166 (78%), Gaps = 7/166 (4%)
Query: 79 EFESKSGSENVDGVS------VDDQDP-NQRPRKKRYHRHTQHQIQEMEAFFKECPHPDD 131
E +S+SGS+++D +S V+D +P N R RKKRYHRHT QIQE+EA FKECPHPD+
Sbjct: 66 ENDSRSGSDHLDAISAAGEDDVEDAEPSNSRKRKKRYHRHTPQQIQELEALFKECPHPDE 125
Query: 132 KQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSS 191
KQR ELSR L L+ QVKFWFQN+RTQMK Q ERHEN+ L+ +N+KLRAENM +EA+ S
Sbjct: 126 KQRAELSRRLSLDARQVKFWFQNRRTQMKTQLERHENALLKQENDKLRAENMTIREAMRS 185
Query: 192 ASCPNCGGPAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGK 237
C +CG PA LGE+S +E HLRIENARL++E++R+ A+A K++GK
Sbjct: 186 PMCGSCGSPAMLGEVSLEEQHLRIENARLKDELNRVCALATKFLGK 231
>Os01g0788800 Homeodomain-like containing protein
Length = 709
Score = 344 bits (882), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 231/697 (33%), Positives = 349/697 (50%), Gaps = 66/697 (9%)
Query: 94 VDDQDPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQ 153
V+ + N++ RK+R R T Q + +E FF C HPDD Q++ LS GL QVKFWFQ
Sbjct: 57 VNSSNTNEK-RKRRLQRLTGKQSEVLEGFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQ 115
Query: 154 NKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHL 213
NKRTQ+K + EN +L +NE LR EN R K A +A C C + +++ + L
Sbjct: 116 NKRTQVKTMCWKEENYKLSVENEILRDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERL 175
Query: 214 RIENARLREEIDRISAIAAKYVGKPMVPFPVLSNPMAAAASRAPLDLPVAPYXXXXXXXX 273
++ L++EI R SN AA+ A A Y
Sbjct: 176 MGQSEWLQQEIAR-------------------SNGTPPAANLAFQLNSSADYV------- 209
Query: 274 XXXXXXXXXXVQSEVDKPMIVELAVAAMEELVRMAQLDEPLWSVAPPLDATAAAMETLSE 333
+ D+ MI ELA AM L+ +A+ LW P + E L++
Sbjct: 210 ----------FSGQHDQQMIAELAKNAMHALIILAESHVALWFPVP-----GCSYEVLNK 254
Query: 334 EEYARMFPRGLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITL 393
Y + +P G ++EA+R ++V+M + ++V+ LMD Y F ++S A+T
Sbjct: 255 MAYDQAYPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTN 314
Query: 394 EVLSTGVAGNYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSLDSLRP 453
+ + + YNG +Q+M+VE PSPLVP R+ F+RYC +G V+DVSLD
Sbjct: 315 RIYTWPTSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDD--G 372
Query: 454 SPVLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGT 513
S KCR+ PSG LIQ + KVT +EHV DD VH +Y+ +N GL FGARRWV T
Sbjct: 373 SIFSKCRKMPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMN-GLVFGARRWVAT 431
Query: 514 LDRQCERLASVMASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLS 573
+ RQ R+ V + S++GRK+++KLA+ ++ SF GG+ A+ WT +
Sbjct: 432 MARQSARMRDVHHNKTAPQ-----VSTKGRKNLMKLADDLLASFAGGIAATGGGTWTVVI 486
Query: 574 GSGAE-DVRVMTRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRSEWDILSN 632
G+G E D+RV R++ + I L+ S LP+P ++ FD LR+ + R +WD+L +
Sbjct: 487 GAGTEKDIRVAYRRTTEGSSSYNAI-LSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVH 545
Query: 633 GGIVQEMAHIANGRDQGNCVSLLRVXXXXXX-XXXMLILQESCTDASGSYVIYAPVDVVA 691
G +V+E IA G + V++L +ILQ + DASGS+++Y+ +D
Sbjct: 546 GSVVKEEVTIARGVGNDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSEL 605
Query: 692 MNVVL--------NGGDPDYVALLPSGFAILPDGPAHXXXXXXXXXXXXXXXXLLTVAFQ 743
MN ++ G P +L P+GF++LPD A L+T+ FQ
Sbjct: 606 MNTMVLSPSDLPPGRGGP---SLYPTGFSLLPDVEA--AQDSSGIALGEVGGTLMTMGFQ 660
Query: 744 ILVDSVPTAKLSLGSVATVNSLIACTVERIKAAVSGE 780
I V ++ S A+ L+ T+ +K + E
Sbjct: 661 IPVKLASGDRMYSRSAASAIRLMTDTIALVKKTLMNE 697
>Os08g0292000 Homeobox domain containing protein
Length = 786
Score = 289 bits (739), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 215/689 (31%), Positives = 333/689 (48%), Gaps = 75/689 (10%)
Query: 85 GSENVD---GVSVDDQ--DPNQRPRKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSR 139
GS N D G+S + D R + +RY T Q + + F+ CP+PD K+L++
Sbjct: 37 GSSNQDKRNGLSQGENRMDTCTRKKPRRYQLLTMQQKETLNRAFQSCPNPDRNDLKKLAK 96
Query: 140 ELGLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGG 199
EL + Q+K+WFQN RT+MK E L+ +NE+L+ EN + + +++C C
Sbjct: 97 ELNMTETQIKYWFQNCRTKMKKFKNNEERKLLQKENEELKKENAELRNRMKNSTCRACDL 156
Query: 200 PAALGEMSFDEHHLRIENARLREEIDRISAIAAKYVGKPMVP----FPVLSNPMAAAASR 255
P D H EN L + +++ ++P F + +++ A
Sbjct: 157 PL----FHIDCRHW--ENPMLNKGNHGVTSNLIPQAVSSLLPSSSGFVASGSNLSSNAVL 210
Query: 256 APLD-LP---VAPYXXXXXXXXXXXXXXXXXXVQSEVDKPMIVELAVAAMEELVRMAQLD 311
P+ +P + P +K ++++LA AMEE + + +
Sbjct: 211 MPVSAMPSSVLQPAPAVSGANFPILHNLSANANDGYTEKNVLLDLANRAMEEFFSLMKEN 270
Query: 312 E----------PLWSVAPPLDATAAAMETLSEEEYARMFPRGLGPKQYGLRSEASRDSAV 361
E PLW P +D +E+L+ +EY R +G K + +RD+A+
Sbjct: 271 ESLLVKKKENGPLW--LPHMDILG--VESLNYQEYLAK-SRTIGQKPVDFKVVVTRDTAI 325
Query: 362 VIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAGNYNGALQVMSVEFQVPSPL 421
V + +LV+ L+DAN++ +F IV+ A T +++STG + ++G LQ+M E QV SP
Sbjct: 326 VNGSCVDLVKSLLDANRWRELFPGIVASANTTKIISTGPSNLHDGLLQLMRAELQVMSPE 385
Query: 422 VPTRESYFVRYCKQNADGTWAVVDVSLDSLRPSPV----------------LKCRRRPSG 465
VP + F+R Q G W VVDVS+D++ P ++ R PSG
Sbjct: 386 VPVCDVTFLRQSVQFGSGLWCVVDVSIDTILPGESKTAQSSVQTSSTAARRMEVRLLPSG 445
Query: 466 CLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVM 525
C+I+EM NGYSKVTW+ H D+R+V +Y L+ S A GA RWV +L R + L S +
Sbjct: 446 CVIEEMENGYSKVTWMVHAAYDERAVPVLYHSLLRSAKALGACRWVASLQRHSQFL-SGL 504
Query: 526 ASNIPTSDIGVITSSEGRKSMLKLAERMVVSFCGGVTASVAHQWTTLSGSGAEDVRVMTR 585
I D +T R+ +L L ++M SF G+ AS++ TL +D +
Sbjct: 505 HKYIFCPD-STMTEVVMRRKVLYLVKQMTSSFT-GLFASMSK--ATL--QDGDDTHFAHQ 558
Query: 586 KSVDDPGRPPGIVLNAATSFWLP-VPPKRVFDFLRDESSRSEWDIL-------------- 630
G P G++L+A T+ WLP V P+ V+D LRDE EW L
Sbjct: 559 IVGGATGEPAGLLLSATTTIWLPGVNPRHVYDHLRDEQCHGEWRCLLGEQLHQGNALPYG 618
Query: 631 --SNGGIVQEMAHIANGRDQGNCVSLLRVXXXXXXXXXMLILQESCTDASGSYVIYAPVD 688
NG V E + NG +G+ +SL+ L+LQE+ TD SGS ++YA D
Sbjct: 619 APLNGETVPEFYRMVNGLHEGHAISLISPREMGGNISNTLLLQEARTDLSGSLIVYARTD 678
Query: 689 VVAMNVVLNGG-DPDYVALLPSGFAILPD 716
V ++ ++N G +P V L+ SG AILPD
Sbjct: 679 VNTVHSIMNSGLNPATVFLVSSGCAILPD 707
>Os08g0187500 Similar to Roc1
Length = 326
Score = 273 bits (698), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 144/208 (69%), Positives = 155/208 (74%), Gaps = 17/208 (8%)
Query: 2 MIPARHMPSMIGRNXXXXXXXXXXX-XXQPNLLDNXXXXXXXXXXXXXXXLLDQIPATT- 59
M PAR MP +IGRN Q ++LD+ DQIP TT
Sbjct: 1 MTPARRMPPVIGRNGVAYESPSAQLPLTQADMLDSHHLQQALQQQ-----YFDQIPVTTT 55
Query: 60 --AESGDNMIRSRASDPLGG--DEFESKSGSENVDG----VSVDDQDPNQRPRKKRYHRH 111
A+SGDNM+ RA GG DEFESKS SENVDG +S DDQDPNQRPRKKRYHRH
Sbjct: 56 AAADSGDNMLHGRAD--AGGLVDEFESKSCSENVDGAGDGLSGDDQDPNQRPRKKRYHRH 113
Query: 112 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENSQL 171
TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHEN+QL
Sbjct: 114 TQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHERHENAQL 173
Query: 172 RSDNEKLRAENMRYKEALSSASCPNCGG 199
R++N+KLRAENMRYKEALSSASCPNCGG
Sbjct: 174 RAENDKLRAENMRYKEALSSASCPNCGG 201
>Os08g0136100 Similar to Roc1
Length = 130
Score = 263 bits (672), Expect = 4e-70, Method: Composition-based stats.
Identities = 119/130 (91%), Positives = 128/130 (98%)
Query: 104 RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQH 163
RKKRYHRHTQHQIQE+EAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMK QH
Sbjct: 1 RKKRYHRHTQHQIQELEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQH 60
Query: 164 ERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREE 223
ERHEN+ LR++NEKLRAENMRYKEAL++ASCPNCGGPAA+GEMSFDEHHLR+ENARLR+E
Sbjct: 61 ERHENNALRAENEKLRAENMRYKEALANASCPNCGGPAAIGEMSFDEHHLRLENARLRDE 120
Query: 224 IDRISAIAAK 233
IDRISAIAAK
Sbjct: 121 IDRISAIAAK 130
>Os09g0526200 Similar to OCL3 protein
Length = 302
Score = 235 bits (599), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 132/261 (50%), Positives = 167/261 (63%), Gaps = 29/261 (11%)
Query: 546 MLKLAERMVVSFCGGVTASVAHQWTTL--------------SGSGAEDVRVMTRKSVDDP 591
MLKLA+RM +FC GV AS A +W L G G + VR+M R SV P
Sbjct: 35 MLKLAQRMTDNFCAGVCASAAQKWRRLDEWRGEGGGGGGGGGGDGEDKVRMMARHSVGAP 94
Query: 592 GRPPGIVLNAATSFWLP-VPPKRVFDFLRDESSRSEWDILSNGGIVQEMAHIANGRDQGN 650
G PPG+VL+A TS LP P+RVFD+LRDE R +WDIL+NG +QEM HIA G+ GN
Sbjct: 95 GEPPGVVLSATTSVRLPGTLPQRVFDYLRDEQRRGDWDILANGEAMQEMDHIAKGQHHGN 154
Query: 651 CVSLLRVXXXXXXXXXMLILQESCTDASGSYVIYAPVDVVAMNVVLNGGDPDYVALLPSG 710
VSLLR MLILQE+CTD+SGS V+YAPVDV +M+VV+NGGD YV+LLPSG
Sbjct: 155 AVSLLRPNATSGNQNNMLILQETCTDSSGSLVVYAPVDVQSMHVVMNGGDSAYVSLLPSG 214
Query: 711 FAILPDG--------PAHXXXXXX------XXXXXXXXXXLLTVAFQILVDSVPTAKLSL 756
FAILPDG PA L+TVAFQILV+++PTAKL++
Sbjct: 215 FAILPDGHNNGASPSPAEVGSGASPNSAAGGGGGSNNTGSLVTVAFQILVNNLPTAKLTV 274
Query: 757 GSVATVNSLIACTVERIKAAV 777
SV TV++L++CT+++IK+A+
Sbjct: 275 ESVDTVSNLLSCTIQKIKSAL 295
>Os09g0526300 Similar to Homeobox protein GLABRA2 (Homeobox-leucine zipper
protein ATHB-10) (HD-ZIP protein ATHB-10)
Length = 131
Score = 189 bits (480), Expect = 7e-48, Method: Composition-based stats.
Identities = 88/131 (67%), Positives = 106/131 (80%), Gaps = 1/131 (0%)
Query: 104 RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKN-Q 162
+KKRYHRHT QIQE+EA FKECPHPD+KQR ELSR L LE QVKFWFQN+RTQMK Q
Sbjct: 1 KKKRYHRHTPQQIQELEAVFKECPHPDEKQRMELSRRLNLESRQVKFWFQNRRTQMKQTQ 60
Query: 163 HERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLRE 222
ERHEN+ LR +N+KLRAENM +EA+ + C +CGG A LGE+S +E HLRIENARL++
Sbjct: 61 IERHENALLRQENDKLRAENMTIREAMRNPMCASCGGAAVLGEVSLEEQHLRIENARLKD 120
Query: 223 EIDRISAIAAK 233
E+DR+ A+A K
Sbjct: 121 ELDRVCALAGK 131
>Os06g0208100 Similar to Homeodomain protein HOX3
Length = 129
Score = 186 bits (472), Expect = 5e-47, Method: Composition-based stats.
Identities = 83/130 (63%), Positives = 105/130 (80%), Gaps = 1/130 (0%)
Query: 104 RKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQH 163
R+KRYHRHT QIQ++EA FKECPHPD+ QR +LSRELGLEP Q+KFWFQN+RTQMK QH
Sbjct: 1 RRKRYHRHTPRQIQQLEAMFKECPHPDENQRAQLSRELGLEPRQIKFWFQNRRTQMKAQH 60
Query: 164 ERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPAALGEMSFDEHHLRIENARLREE 223
ER +N LR++N+K+R EN+ +EAL + CP CGGP +GE FDE LR+ENARL+EE
Sbjct: 61 ERADNCFLRAENDKIRCENIAIREALKNVICPTCGGP-PVGEDYFDEQKLRMENARLKEE 119
Query: 224 IDRISAIAAK 233
+DR+S + +K
Sbjct: 120 LDRVSNLTSK 129
>Os01g0760800 Similar to Homeodomain protein 1
Length = 134
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 84/128 (65%), Gaps = 11/128 (8%)
Query: 105 KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKNQHE 164
+K YHRHT QI+ MEA FKE PHPD++QR+++S++LGL QVKFWFQN+RTQ+K E
Sbjct: 1 RKNYHRHTAEQIRIMEALFKESPHPDERQRQQVSKQLGLSARQVKFWFQNRRTQIK---E 57
Query: 165 RHENSQLRSDNEKLRAENMRYKE-ALSSASCPNCG-------GPAALGEMSFDEHHLRIE 216
RHENS L+S+ EKL+ E+ +E A + C NCG AA E LR+E
Sbjct: 58 RHENSLLKSELEKLQDEHRAMRELAKKPSRCLNCGVVATSSDAAAAATAADTREQRLRLE 117
Query: 217 NARLREEI 224
A+L+ E+
Sbjct: 118 KAKLKAEV 125
>Os07g0667200
Length = 164
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/117 (43%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Query: 424 TRESYFVRYCKQNADGTWAVVDVSLDSLRPS----PVLKCRRRPSGCLIQEMPNGYSKVT 479
+E FVRYC+Q G WA+ D+ ++ R + P L+ RR PSGCLI M N YS+VT
Sbjct: 41 AQEVNFVRYCRQIEQGLWAITDIFVNLQRDAYFGVPPLRSRRLPSGCLIANMANSYSEVT 100
Query: 480 WVEHVEVDDRS-VHNIYKLLVNSGLAFGARRWVGTLDRQCERLASVMASNIPTSDIG 535
VEH+EV++++ ++ +Y+ LV SG FGA W+ L R C+R AS++A +P G
Sbjct: 101 RVEHMEVEEKNPINVLYRDLVLSGDVFGAHCWLAALQRACDRYASLVALGVPHHITG 157
>Os07g0426600
Length = 196
Score = 99.4 bits (246), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 82/149 (55%), Gaps = 4/149 (2%)
Query: 86 SENVDGVSVDDQDPNQRPR----KKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSREL 141
+E D +VD D + + KR RHT QI+ +E+ F+ C + QR +L+++L
Sbjct: 29 TEEADDAAVDYHDDSSEGQDEVSNKRMKRHTDDQIKHLESVFERCTYLGGNQRVQLAKKL 88
Query: 142 GLEPLQVKFWFQNKRTQMKNQHERHENSQLRSDNEKLRAENMRYKEALSSASCPNCGGPA 201
G+E QVKFWFQN+RT+ K ER E L+ +N+ L AEN KEA+ + C CG P
Sbjct: 89 GMEERQVKFWFQNRRTRKKMHDERQEGMWLQEENDVLHAENKVLKEAMWANICFTCGSPV 148
Query: 202 ALGEMSFDEHHLRIENARLREEIDRISAI 230
+ +L +N RL +E+ +A+
Sbjct: 149 VPAIPTVQHRYLSFQNMRLADELQHATAV 177
>Os03g0109400 Homeobox domain containing protein
Length = 839
Score = 73.6 bits (179), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/303 (24%), Positives = 128/303 (42%), Gaps = 37/303 (12%)
Query: 343 GLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAG 402
G+ +G R A+R +V + +VEIL D + N LEV + AG
Sbjct: 198 GIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDCRN-------LEVFTMIPAG 250
Query: 403 NYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVDVSL-------DSLRPSP 455
N G ++++ + P+ LVP R+ + +RY DG+ V + SL +
Sbjct: 251 N-GGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSAASAQQ 309
Query: 456 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 515
++ PSG L++ G S V V+H++++ SV + + L S + L
Sbjct: 310 YVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 368
Query: 516 RQCERLASVMASNIPTSDIGVITSSEGRK--SMLKLAERMVVSFCGGVTASVAHQWTTLS 573
R ++A + G + + GR+ + ++R+ F ++ W+ +
Sbjct: 369 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSIMG 420
Query: 574 GSGAEDVRVM---TRKSVDDP------GRPPGIVLNAATSFWLPVPPKRVFDFLRDESSR 624
G G EDV + T+K + G P GI+ A+ VPP + FLR+ R
Sbjct: 421 GDGVEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREH--R 478
Query: 625 SEW 627
SEW
Sbjct: 479 SEW 481
>Os10g0480200 Similar to Rolled leaf1
Length = 840
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 36/302 (11%)
Query: 343 GLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAG 402
G+ +G R A+R +V + +VEIL D + F + S LEV + AG
Sbjct: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW---FRDCRS----LEVFTMFPAG 252
Query: 403 NYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVD-------VSLDSLRPSP 455
N G ++++ ++ P+ LVP R+ + +RY DG+ V + +
Sbjct: 253 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGSGGGPSTASAQQ 311
Query: 456 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 515
++ PSG L++ G S V V+H++++ SV + + L S + L
Sbjct: 312 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 370
Query: 516 RQCERLASVMASNIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLS 573
R ++A + G + + GR+ + ++R+ F ++ W+ +
Sbjct: 371 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 422
Query: 574 GSGAEDVRVM--------TRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRS 625
G G EDV + T S + P G++ A+ VPP + FLR+ RS
Sbjct: 423 GDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 480
Query: 626 EW 627
EW
Sbjct: 481 EW 482
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.132 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 25,022,857
Number of extensions: 1034402
Number of successful extensions: 3048
Number of sequences better than 1.0e-10: 16
Number of HSP's gapped: 3002
Number of HSP's successfully gapped: 19
Length of query: 784
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 675
Effective length of database: 11,344,475
Effective search space: 7657520625
Effective search space used: 7657520625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)