FiT-DB / Search/ Help/ Sample detail

Os10g0480200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Rolled leaf1.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.89 (0.019) R2 : 0.621
β1 : -1.25 (0.0695) R2dD : 0.277 R2D : 0.225
β2 : 1.03 (0.0495) R2dC : 0.363 R2C : 0.335
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.261 (0.0405) R2dN8 : 0.0464 R2N8 : -0.00918
σ : 0.357
deviance : 58.01
__
_____
C
peak time of C : 5.95
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.62 0.341 9.87 -1.35 1.02 -0.585 0.0434 -0.358 -0.206 6.17 51 1111 -- --
52.7 0.338 9.87 -1.36 1.03 -0.652 0.0599 -- -0.196 6.18 51 1090 -- --
52.62 0.338 9.87 -1.35 1.02 -0.585 -- -0.355 -0.206 6.17 51.04 1110 -- --
52.69 0.338 9.88 -1.36 1.02 -0.654 -- -- -0.201 6.18 51.32 1110 -- --
105.96 0.479 9.88 -1.28 -- -0.414 -- -0.887 -0.172 -- 53.64 1214 -- --
58.01 0.357 9.89 -1.25 1.03 -- 0.0292 -- -0.261 5.95 -- -- -- --
58.01 0.357 9.89 -1.25 1.03 -- -- -- -0.261 5.95 -- -- -- --
106.41 0.48 9.89 -1.32 -- -0.576 -- -- -0.166 -- 52 1212 -- --
95.86 0.456 9.88 -- 1.07 -0.448 -- -- -0.182 6.28 85 2230 -- --
113.3 0.497 9.91 -1.22 -- -- -- -- -0.238 -- -- -- -- --
98.93 0.465 9.86 -- 1.01 -- -- -- -0.123 6.01 -- -- -- --
119.45 0.509 9.87 -- -- 0.816 -- -- -0.107 -- 72.05 493 -- --
152.26 0.576 9.88 -- -- -- -- -- -0.103 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 51.49 wind 9.0 43200 > th dose dependent rect. 15 1
2 51.49 wind 3.0 14400 < th dose dependent rect. 12 1
3 51.62 wind 1.0 43200 < th dose dependent rect. 9 5
6 51.86 humidity 90.0 270 > th dose independent rect. 3 3
7 51.89 temperature 10.0 270 > th dose dependent rect. 22 3
8 51.89 wind 9.0 90 < th dose dependent rect. 3 8
9 51.90 wind 9.0 43200 > th dose independent rect. 15 1
10 51.91 temperature 30.0 43200 > th dose dependent rect. 8 1
25 51.92 humidity 50.0 270 > th dose independent rect. 22 15
26 51.94 precipitation 0.1 270 < th dose independent rect. 1 21
28 51.94 precipitation 0.1 270 < th dose dependent rect. 1 21
29 51.97 temperature 10.0 30 > th dose dependent rect. 22 6
35 52.07 wind 7.0 14400 < th dose independent rect. 15 1
36 52.08 humidity 90.0 270 > th dose independent rect. 4 1
39 52.09 temperature 20.0 30 > th dose independent rect. 4 5
42 52.13 wind 1.0 43200 > th dose independent rect. 12 1
43 52.13 wind 1.0 43200 < th dose independent rect. 8 6
45 52.15 wind 9.0 43200 > th dose dependent rect. 13 4
46 52.16 precipitation 0.1 270 < th dose independent rect. 2 19
47 52.16 precipitation 0.1 270 < th dose dependent rect. 2 19
58 52.24 temperature 30.0 90 < th dose independent rect. 3 8
59 52.24 wind 9.0 30 < th dose dependent rect. 4 18
62 52.28 temperature 15.0 270 > th dose independent rect. 22 3
70 52.32 temperature 30.0 43200 > th dose independent rect. 8 1
88 52.38 wind 1.0 43200 > th dose independent rect. 9 5
89 52.38 radiation 30.0 270 < th dose independent rect. 2 7
91 52.39 wind 9.0 43200 > th dose independent rect. 13 4
99 52.44 temperature 15.0 270 > th dose independent rect. 21 5
105 52.46 wind 1.0 43200 < th dose independent rect. 12 1
106 52.46 precipitation 0.1 270 < th dose independent rect. 13 9
107 52.46 precipitation 0.1 270 < th dose dependent rect. 13 9
116 52.48 wind 1.0 270 > th dose independent rect. 9 17
117 52.48 temperature 10.0 30 > th dose dependent rect. 4 5
118 52.48 wind 7.0 90 < th dose dependent rect. 4 15
119 52.48 wind 9.0 90 < th dose dependent rect. 3 20
122 52.49 temperature 10.0 90 > th dose dependent rect. 9 18
124 52.50 wind 9.0 14400 > th dose dependent rect. 15 4
131 52.52 temperature 30.0 43200 < th dose independent rect. 5 4
132 52.52 precipitation 0.1 270 < th dose independent rect. 2 7
133 52.52 precipitation 0.1 270 < th dose dependent rect. 2 7
134 52.53 temperature 15.0 30 > th dose independent rect. 9 19
135 52.53 wind 5.0 14400 > th dose dependent rect. 15 1
139 52.54 wind 9.0 43200 > th dose dependent rect. 13 1
143 52.55 atmosphere 1015.0 270 < th dose independent rect. 22 3
145 52.55 humidity 80.0 270 > th dose dependent rect. 3 4
156 52.57 humidity 50.0 270 > th dose dependent rect. 2 7
158 52.58 temperature 30.0 43200 < th dose independent rect. 20 13
162 52.59 temperature 20.0 90 > th dose independent rect. 3 8
166 52.60 wind 9.0 43200 > th dose independent rect. 13 1
168 52.60 temperature 30.0 43200 < th dose independent rect. 22 11
172 52.61 temperature 15.0 30 > th dose independent rect. 22 6
174 52.61 atmosphere 995.0 30 > th dose dependent rect. 4 5
176 52.61 atmosphere 995.0 90 > th dose dependent rect. 3 8
192 52.65 wind 1.0 270 > th dose independent rect. 22 4
193 52.65 wind 9.0 43200 < th dose independent rect. 13 4
195 52.65 wind 7.0 30 < th dose dependent rect. 4 5
199 52.66 wind 5.0 90 < th dose independent rect. 3 8
202 52.67 atmosphere 1005.0 30 > th dose independent rect. 4 5
205 52.67 temperature 15.0 270 > th dose dependent rect. 23 1
215 52.68 humidity 90.0 4320 > th dose dependent rect. 5 1
241 52.72 wind 9.0 43200 > th dose independent rect. 11 3
242 52.72 precipitation 0.1 270 < th dose independent rect. 22 3
244 52.72 precipitation 0.1 270 < th dose dependent rect. 22 3
251 52.73 wind 9.0 270 < th dose independent rect. 22 3
253 52.73 temperature 30.0 270 < th dose independent rect. 22 3
254 52.73 humidity 50.0 270 > th dose independent rect. 22 3
257 52.73 atmosphere 995.0 270 > th dose independent rect. 22 3
258 52.73 radiation 1.0 270 < th dose independent rect. 22 3
263 52.73 temperature 15.0 270 > th dose independent rect. 2 19
265 52.73 temperature 10.0 270 > th dose independent rect. 1 21
266 52.73 radiation 1.0 270 < th dose dependent rect. 22 3
281 52.75 temperature 10.0 270 > th dose independent rect. 13 9
282 52.75 temperature 10.0 270 > th dose independent rect. 22 15
283 52.75 atmosphere 995.0 270 > th dose independent rect. 22 15
284 52.75 temperature 15.0 270 > th dose independent rect. 3 16
285 52.75 temperature 15.0 90 > th dose independent rect. 4 18
286 52.75 atmosphere 1000.0 30 > th dose independent rect. 4 18
292 52.75 radiation 1.0 10 < th dose dependent rect. 22 18
297 52.76 wind 9.0 270 < th dose independent rect. 22 15
304 52.77 atmosphere 1015.0 270 < th dose independent rect. 22 15
305 52.77 wind 9.0 270 < th dose independent rect. 9 17
315 52.78 atmosphere 1010.0 30 < th dose independent rect. 22 6
321 52.79 temperature 25.0 270 < th dose independent rect. 2 5
323 52.79 radiation 40.0 270 < th dose dependent rect. 2 7
325 52.80 temperature 25.0 270 < th dose independent rect. 3 3
339 52.81 temperature 25.0 270 < th dose independent rect. 4 1
340 52.81 atmosphere 1015.0 270 < th dose independent rect. 21 5
349 52.82 humidity 50.0 270 > th dose dependent rect. 22 3
355 52.83 precipitation 0.1 270 < th dose independent rect. 21 5
357 52.83 temperature 30.0 10 < th dose independent rect. 4 8
359 52.83 precipitation 0.1 270 < th dose dependent rect. 21 5
368 52.84 humidity 50.0 270 > th dose independent rect. 2 7
369 52.84 atmosphere 995.0 270 > th dose independent rect. 2 7
370 52.84 atmosphere 1015.0 270 < th dose independent rect. 2 7
372 52.84 wind 9.0 90 < th dose independent rect. 11 16
373 52.84 temperature 10.0 270 > th dose independent rect. 9 17
379 52.85 radiation 10.0 43200 > th dose independent rect. 17 1
415 52.88 temperature 30.0 270 < th dose independent rect. 21 5
416 52.88 humidity 50.0 270 > th dose independent rect. 21 5
419 52.88 atmosphere 995.0 270 > th dose independent rect. 21 5
420 52.88 radiation 1.0 270 < th dose independent rect. 21 5
429 52.88 atmosphere 1015.0 30 < th dose independent rect. 9 19
432 52.88 radiation 1.0 270 < th dose dependent rect. 21 5
442 52.89 wind 9.0 270 < th dose independent rect. 21 5
443 52.89 wind 5.0 30 < th dose independent rect. 22 6
448 52.89 radiation 1.0 10 < th dose dependent rect. 22 16
469 52.92 wind 9.0 30 < th dose independent rect. 4 5
470 52.92 temperature 10.0 30 > th dose independent rect. 4 5
472 52.92 temperature 30.0 30 < th dose independent rect. 4 5
473 52.92 humidity 50.0 30 > th dose independent rect. 4 5
475 52.92 atmosphere 995.0 30 > th dose independent rect. 4 5
476 52.92 atmosphere 1015.0 30 < th dose independent rect. 4 5
500 52.94 radiation 40.0 30 < th dose independent rect. 4 5
508 52.94 atmosphere 995.0 30 > th dose dependent rect. 4 18
514 52.95 wind 7.0 10 < th dose independent rect. 4 18
517 52.95 wind 1.0 270 < th dose dependent rect. 4 1
519 52.95 humidity 50.0 30 > th dose dependent rect. 4 5
522 52.96 wind 1.0 14400 < th dose independent rect. 8 2
564 52.97 temperature 10.0 90 > th dose independent rect. 11 16
565 52.97 wind 9.0 30 < th dose independent rect. 9 19
566 52.97 wind 9.0 270 < th dose independent rect. 1 21
567 52.97 wind 9.0 14400 > th dose dependent sin 17 NA
569 52.97 wind 9.0 30 < th dose dependent rect. 22 6
578 52.98 wind 9.0 270 < th dose independent rect. 13 9
579 52.98 humidity 50.0 270 > th dose independent rect. 9 17
594 52.99 wind 1.0 270 > th dose independent rect. 22 16
596 52.99 humidity 90.0 14400 < th dose dependent rect. 24 1
600 52.99 wind 9.0 14400 > th dose dependent rect. 17 21
623 53.01 precipitation 0.1 270 < th dose independent rect. 16 15
628 53.01 humidity 50.0 270 > th dose dependent rect. 21 5
631 53.01 precipitation 0.1 270 < th dose dependent rect. 16 15
635 53.02 atmosphere 1005.0 30 > th dose independent rect. 4 7
636 53.02 atmosphere 1000.0 270 > th dose independent rect. 2 19
649 53.03 humidity 50.0 270 > th dose independent rect. 7 9
660 53.04 wind 9.0 270 < th dose dependent rect. 22 3
661 53.04 temperature 10.0 270 > th dose dependent rect. 3 3
666 53.05 humidity 50.0 90 > th dose independent rect. 11 16
679 53.06 wind 9.0 270 < th dose independent rect. 2 19
689 53.07 temperature 30.0 30 < th dose independent rect. 22 6
690 53.07 humidity 50.0 30 > th dose independent rect. 22 6
693 53.07 atmosphere 995.0 30 > th dose independent rect. 22 6
695 53.07 radiation 1.0 30 < th dose independent rect. 22 6
705 53.07 atmosphere 1015.0 30 < th dose independent rect. 4 18
708 53.07 humidity 90.0 14400 < th dose dependent rect. 24 3
715 53.07 radiation 1.0 30 < th dose dependent rect. 22 6
726 53.08 wind 9.0 30 < th dose independent rect. 22 6
731 53.08 atmosphere 1000.0 270 > th dose independent rect. 3 16
732 53.08 atmosphere 1015.0 90 < th dose independent rect. 11 16
752 53.09 temperature 10.0 90 > th dose dependent rect. 11 16
762 53.10 radiation 1.0 10 < th dose dependent rect. 22 14
800 53.12 wind 1.0 14400 > th dose independent rect. 8 2
818 53.12 atmosphere 1015.0 270 < th dose independent rect. 2 19
829 53.13 atmosphere 1010.0 14400 > th dose independent rect. 2 1
839 53.13 wind 1.0 270 > th dose independent rect. 13 9
840 53.13 humidity 70.0 720 > th dose independent rect. 17 10
842 53.13 precipitation 0.1 30 < th dose independent rect. 4 18
855 53.13 wind 9.0 14400 < th dose dependent rect. 4 12
856 53.13 wind 1.0 14400 > th dose dependent rect. 24 18
857 53.13 precipitation 0.1 30 < th dose dependent rect. 4 18
867 53.14 precipitation 0.1 30 < th dose independent rect. 9 19
876 53.14 wind 9.0 14400 < th dose dependent rect. 24 18
878 53.14 precipitation 0.1 30 < th dose dependent rect. 9 19
880 53.15 atmosphere 1010.0 14400 < th dose independent rect. 1 2
882 53.15 atmosphere 1010.0 14400 < th dose independent rect. 24 4
935 53.17 radiation 40.0 43200 > th dose independent rect. 13 3
975 53.17 wind 1.0 14400 > th dose dependent rect. 4 12
984 53.18 wind 3.0 30 < th dose independent rect. 4 5