BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0480200 Os10g0480200|AK102603
(840 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0480200 Similar to Rolled leaf1 1617 0.0
Os03g0109400 Homeobox domain containing protein 1436 0.0
Os03g0640800 Similar to HD-Zip protein (Homeodomain transcr... 1135 0.0
Os12g0612700 Similar to HD-Zip protein (Homeodomain transcr... 1086 0.0
Os01g0200300 Hypothetical protein 349 4e-96
Os06g0722500 176 5e-44
Os06g0720500 Similar to CORONA 150 3e-36
Os03g0769800 Similar to Homeodomain-leucine zipper protein ... 82 2e-15
Os08g0426000 75 2e-13
Os04g0627000 Similar to Roc1 72 2e-12
>Os10g0480200 Similar to Rolled leaf1
Length = 840
Score = 1617 bits (4186), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 784/840 (93%), Positives = 784/840 (93%)
Query: 1 MAAAVAMRXXXXXXXXXXXXXXXXXXXXKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60
MAAAVAMR KYVRYTPEQVEALERVYAECPKPSSSRRQQLL
Sbjct: 1 MAAAVAMRSGSGSDGGGGGYDKAGMDSGKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60
Query: 61 RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120
RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS
Sbjct: 61 RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120
Query: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180
QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT
Sbjct: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180
Query: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240
GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC
Sbjct: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240
Query: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXX 300
RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCER
Sbjct: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 300
Query: 301 XXXXXTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360
TASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV
Sbjct: 301 GGGPSTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360
Query: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420
VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV
Sbjct: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420
Query: 421 MGGDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRS 480
MGGDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRS
Sbjct: 421 MGGDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHRS 480
Query: 481 EWADYNFDAYXXXXXXXXXXXLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALT 540
EWADYNFDAY LPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALT
Sbjct: 481 EWADYNFDAYSASSLKTSSCSLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALT 540
Query: 541 HDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTD 600
HDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTD
Sbjct: 541 HDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTD 600
Query: 601 GTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMAXXX 660
GTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMA
Sbjct: 601 GTPAGRTLDLASSLEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMARQY 660
Query: 661 XXXXXXXXXXXXMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADD 720
MAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADD
Sbjct: 661 VRSIVSSVQRVSMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADD 720
Query: 721 AGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRK 780
AGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRK
Sbjct: 721 AGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRK 780
Query: 781 ALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840
ALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV
Sbjct: 781 ALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840
>Os03g0109400 Homeobox domain containing protein
Length = 839
Score = 1436 bits (3717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/842 (82%), Positives = 744/842 (88%), Gaps = 5/842 (0%)
Query: 1 MAAAVAMRXXXXXXXXXXXXXXXXXXXXKYVRYTPEQVEALERVYAECPKPSSSRRQQLL 60
MAAAVAMR KYVRYTPEQVEALERVYA+CPKP+SSRRQQLL
Sbjct: 1 MAAAVAMRGSSSDGGGYDKVSGMDSG--KYVRYTPEQVEALERVYADCPKPTSSRRQQLL 58
Query: 61 RDCPILANIEPKQIKVWFQNRRCRDKQRKEASRLQAVNRKLTAMNKLLMEENERLQKQVS 120
R+CPILANIEPKQIKVWFQNRRCRDKQRKE+SRLQAVNRKLTAMNKLLMEENERLQKQVS
Sbjct: 59 RECPILANIEPKQIKVWFQNRRCRDKQRKESSRLQAVNRKLTAMNKLLMEENERLQKQVS 118
Query: 121 QLVHENAYMKQQLQNPSLGNDTSCESNVTTPQNPLRDASNPSGLLTIAEETLTEFLSKAT 180
QLVHENA+M+QQLQN L NDTSCESNVTTPQNPLRDASNPSGLL+IAEETLTEFLSKAT
Sbjct: 119 QLVHENAHMRQQLQNTPLANDTSCESNVTTPQNPLRDASNPSGLLSIAEETLTEFLSKAT 178
Query: 181 GTAVDWVPMPGMKPGPDSFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDC 240
GTA+DWV MPGMKPGPDS GIVA+SHGCRGVAARACGLVNLEPTK+VEILKDRPSWFRDC
Sbjct: 179 GTAIDWVQMPGMKPGPDSVGIVAISHGCRGVAARACGLVNLEPTKVVEILKDRPSWFRDC 238
Query: 241 RSLEVFTMFPAGNGGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXX 300
R+LEVFTM PAGNGGT+ELVY Q+YAPTTLVPARDFWTLRYTTTMEDGSLVVCER
Sbjct: 239 RNLEVFTMIPAGNGGTVELVYTQLYAPTTLVPARDFWTLRYTTTMEDGSLVVCERSLSGS 298
Query: 301 XXXXXTASAQQFVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 360
ASAQQ+VRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV
Sbjct: 299 GGGPSAASAQQYVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRV 358
Query: 361 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSV 420
VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWS+
Sbjct: 359 VAQKMTTAALRHIRQIAQETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSI 418
Query: 421 MGGDGIEDVIIACNA-KKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREHR 479
MGGDG+EDV+IACN+ KK+R+ S + AF PGG+ICAKASMLLQSVPPAVLVRFLREHR
Sbjct: 419 MGGDGVEDVVIACNSTKKIRSNSNAGIAFGAPGGIICAKASMLLQSVPPAVLVRFLREHR 478
Query: 480 SEWADYNFDAYXXXXXXXXXXXLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQAL 539
SEWADYN DAY L GLRPMRFSGSQII+PLAHTVENEEILEVVRLEGQ L
Sbjct: 479 SEWADYNIDAYLASTLKTSACSLTGLRPMRFSGSQIIIPLAHTVENEEILEVVRLEGQPL 538
Query: 540 THDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKT 599
THD+ L+SRDIHLLQLCTGIDEKS+GS FQLV APID+ FPD+ PLISSGFRVIPLDMKT
Sbjct: 539 THDEALLSRDIHLLQLCTGIDEKSVGSSFQLVFAPIDD-FPDETPLISSGFRVIPLDMKT 597
Query: 600 DGTPAGRTLDLASSLEVGS-TAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMAX 658
DG +GRTLDLASSLEVGS TAQ +GDAS DDCNLRSVLTIAFQFPYE+HLQDSVA MA
Sbjct: 598 DGASSGRTLDLASSLEVGSATAQASGDASADDCNLRSVLTIAFQFPYELHLQDSVAAMAR 657
Query: 659 XXXXXXXXXXXXXXMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQA 718
MAISPS++GLNAGQ+IISGFPEA TLARW+CQSY +HLGVELL Q+
Sbjct: 658 QYVRSIVSAVQRVSMAISPSQTGLNAGQRIISGFPEAATLARWVCQSYHYHLGVELLSQS 717
Query: 719 DDAGEALLKMLWDYEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAG 778
D E LLKMLW Y+DAILCCSFKEKPVFTFAN+ GL+MLETSLVALQDL+LD+IFDE G
Sbjct: 718 DGDAEQLLKMLWHYQDAILCCSFKEKPVFTFANKAGLDMLETSLVALQDLTLDRIFDEPG 777
Query: 779 RKALYNEIPKLMEQGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWS 838
++AL++ IPKLMEQG+VYLP GVC+SGMGRHVSF+QAVAWKVL ED+NVHCLAFCFVNWS
Sbjct: 778 KEALFSNIPKLMEQGHVYLPSGVCMSGMGRHVSFDQAVAWKVLAEDSNVHCLAFCFVNWS 837
Query: 839 FV 840
FV
Sbjct: 838 FV 839
>Os03g0640800 Similar to HD-Zip protein (Homeodomain transcription factor)
(ATHB-14) (Homeodomain-leucine zipper protein 14)
Length = 859
Score = 1135 bits (2935), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 554/829 (66%), Positives = 647/829 (78%), Gaps = 18/829 (2%)
Query: 29 KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQR 88
KYVRYTPEQVEALERVY ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR+KQR
Sbjct: 32 KYVRYTPEQVEALERVYGECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 91
Query: 89 KEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGN-DTSCESN 147
KEASRLQ VNRKLTAMNKLLMEEN+RLQKQVS+LV+EN YM+QQL NPS+ DTSCES
Sbjct: 92 KEASRLQTVNRKLTAMNKLLMEENDRLQKQVSRLVYENGYMRQQLHNPSVATTDTSCESV 151
Query: 148 VTTPQN----------PLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197
VT+ Q+ P RDA+NP+GLL IAEETL EFLSKATGTAVDWV M GMKPGPD
Sbjct: 152 VTSGQHHQQQNPAATRPQRDANNPAGLLAIAEETLAEFLSKATGTAVDWVQMVGMKPGPD 211
Query: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257
S GI+AVSH C GVAARACGLV+LEPTK+ EILKDRPSW+RDCR ++V + P GNGGTI
Sbjct: 212 SIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDVLHVIPTGNGGTI 271
Query: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXXXXXXXTASAQQFVRAEM 317
EL+YMQ YAPTTL RDFW LRYT+ +EDGSLV+CER + FVRAE+
Sbjct: 272 ELIYMQTYAPTTLAAPRDFWILRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFVRAEV 331
Query: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377
LPSGYL+RPCEGGGS++HIVDH+DL+AWSVPEVLRPLYES +++AQKMT AALRHIRQIA
Sbjct: 332 LPSGYLIRPCEGGGSMIHIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIA 391
Query: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNA-- 435
E+SGE+ Y GRQPAVLRTFSQRLSRGFNDA++GF DDGWS+M DG EDV IA N+
Sbjct: 392 HESSGEMPYGGGRQPAVLRTFSQRLSRGFNDAVNGFPDDGWSLMSSDGAEDVTIAFNSSP 451
Query: 436 -KKVRNTSTSANAF-VTPGGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYXXX 493
K V + S+ F GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD DAY
Sbjct: 452 NKLVGSHVNSSQLFSAIGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAA 511
Query: 494 XXXXXXXXLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553
+PGLR F GSQ+I+PLAHT+E+EE LEV+RLEG +L HD+ ++SRD++LL
Sbjct: 512 ALRASPYAVPGLRAGGFMGSQVILPLAHTLEHEEFLEVIRLEGHSLCHDEVVLSRDMYLL 571
Query: 554 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613
QLC+G+DE + G+C QLV APIDE F DDAPL+ SGFRVIPLD KTD A RTLDLAS+
Sbjct: 572 QLCSGVDENAAGACAQLVFAPIDESFADDAPLLPSGFRVIPLDGKTDAPSATRTLDLAST 631
Query: 614 LEVGS--TAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMAXXXXXXXXXXXXXX 671
LEVGS T + + D S CN RSVLTIAFQF YE HL++SVA MA
Sbjct: 632 LEVGSGGTTRASSDTS-STCNTRSVLTIAFQFSYENHLRESVAAMARQYVRTVVASVQRV 690
Query: 672 XMAISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWD 731
MAI+PSR G K G PEA TLARWI +SY+FH G +LLR + ++ LK +W
Sbjct: 691 AMAIAPSRLGGQIETKNPPGSPEAHTLARWIGRSYRFHTGADLLRTDSQSTDSSLKAMWQ 750
Query: 732 YEDAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLME 791
+ D+I+CCS K PVFTFAN+ GL+MLET+L+ALQD+SL+KI D+ GRKAL E PK+M+
Sbjct: 751 HSDSIMCCSLKAAPVFTFANQAGLDMLETTLIALQDISLEKILDDDGRKALCTEFPKIMQ 810
Query: 792 QGYVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840
QG+ YLPGGVC+S MGR VS+EQAVAWKVL +D+ HCLAF FVNWSFV
Sbjct: 811 QGFAYLPGGVCVSSMGRPVSYEQAVAWKVLSDDDTPHCLAFMFVNWSFV 859
>Os12g0612700 Similar to HD-Zip protein (Homeodomain transcription factor)
(ATHB-14) (Homeodomain-leucine zipper protein 14)
Length = 855
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/827 (63%), Positives = 624/827 (75%), Gaps = 15/827 (1%)
Query: 29 KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIKVWFQNRRCRDKQR 88
KYVRYTPEQVEALERVY ECPKPSS RRQQL+R+CPIL+NIEPKQIKVWFQNRRCR+KQR
Sbjct: 29 KYVRYTPEQVEALERVYTECPKPSSLRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQR 88
Query: 89 KEASRLQAVNRKLTAMNKLLMEENERLQKQVSQLVHENAYMKQQLQNPSLGN-DTSCESN 147
KEASRLQ VNRKL AMNKLLMEEN+RLQKQVS+LV+EN YM+ QL NPS DTSCES
Sbjct: 89 KEASRLQTVNRKLNAMNKLLMEENDRLQKQVSRLVYENGYMRTQLHNPSAATTDTSCESV 148
Query: 148 VTTPQN----------PLRDASNPSGLLTIAEETLTEFLSKATGTAVDWVPMPGMKPGPD 197
VT+ Q+ P RDA+NP+GLL IAEETL EF+SKATGTAV+WV M GMKPGPD
Sbjct: 149 VTSGQHHQQQNPAVLHPQRDANNPAGLLAIAEETLAEFMSKATGTAVEWVQMVGMKPGPD 208
Query: 198 SFGIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSWFRDCRSLEVFTMFPAGNGGTI 257
S GI+AVSH C GVAARACGLV+LEPTK+ EILKDRPSW+RDCR +++ + P GNGGTI
Sbjct: 209 SIGIIAVSHNCSGVAARACGLVSLEPTKVAEILKDRPSWYRDCRCVDIIHVIPTGNGGTI 268
Query: 258 ELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXXXXXXXTASAQQFVRAEM 317
EL+YMQ YAPTTL RDFWTLRYT+ +EDGSLV+CER + F+RAE+
Sbjct: 269 ELIYMQTYAPTTLAAPRDFWTLRYTSGLEDGSLVICERSLTQSTGGPSGPNTPNFIRAEV 328
Query: 318 LPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIA 377
LPSGYL+RPCEGGGS+++IVDH+DL+AWSVPEVLRPLYES +++AQKMT AALRHIRQIA
Sbjct: 329 LPSGYLIRPCEGGGSMIYIVDHVDLDAWSVPEVLRPLYESPKILAQKMTIAALRHIRQIA 388
Query: 378 QETSGEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMGGDGIEDVIIACNA-- 435
E+SGE+ Y GRQPAV RTFSQRLSRGFNDA+SGF DDGWS++ DG ED+ I+ N+
Sbjct: 389 HESSGEIPYGAGRQPAVFRTFSQRLSRGFNDAVSGFPDDGWSLLSSDGSEDITISVNSSP 448
Query: 436 KKVRNTSTSANAFVTP--GGVICAKASMLLQSVPPAVLVRFLREHRSEWADYNFDAYXXX 493
K+ + S N + GG++CAKASMLLQ+VPPA+LVRFLREHRSEWAD DAY
Sbjct: 449 NKLVGSHVSPNPLFSTVGGGILCAKASMLLQNVPPALLVRFLREHRSEWADPGVDAYSAA 508
Query: 494 XXXXXXXXLPGLRPMRFSGSQIIMPLAHTVENEEILEVVRLEGQALTHDDGLMSRDIHLL 553
+PGLR F GSQ+I+PLAHT+E+EE LEV+RLEG +HD+ L+SRD++LL
Sbjct: 509 SLRASPYAVPGLRTSGFMGSQVILPLAHTLEHEEFLEVIRLEGHGFSHDEVLLSRDMYLL 568
Query: 554 QLCTGIDEKSMGSCFQLVSAPIDELFPDDAPLISSGFRVIPLDMKTDGTPAGRTLDLASS 613
QLC+G+DE + + QLV APIDE F DDAPL+ SGFRVIPLD K DG A RTLDLAS+
Sbjct: 569 QLCSGVDENATSASAQLVFAPIDESFADDAPLLPSGFRVIPLDTKMDGPSATRTLDLASA 628
Query: 614 LEVGSTAQPTGDASMDDCNLRSVLTIAFQFPYEMHLQDSVATMAXXXXXXXXXXXXXXXM 673
LEVG RSVLTIAFQF YE HL++SVA MA +
Sbjct: 629 LEVGPGGASRASVEASGTCNRSVLTIAFQFSYENHLRESVAAMARSYVRAVMASVQRVAV 688
Query: 674 AISPSRSGLNAGQKIISGFPEAPTLARWICQSYQFHLGVELLRQADDAGEALLKMLWDYE 733
AI+PSR G G K PEA TLA WI +SY+ H G ++ + ++ L +LW +
Sbjct: 689 AIAPSRLGPQIGMKHPPASPEALTLASWIGRSYRAHTGADIRWSDTEDADSPLALLWKHS 748
Query: 734 DAILCCSFKEKPVFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQG 793
DAILCCS K P+FTFAN GL++LET+LV LQD+SL+ I D+ GRKAL +E PK+M+QG
Sbjct: 749 DAILCCSLKPAPMFTFANNAGLDILETTLVNLQDISLEMILDDEGRKALCSEFPKIMQQG 808
Query: 794 YVYLPGGVCLSGMGRHVSFEQAVAWKVLGEDNNVHCLAFCFVNWSFV 840
+ YLPGGVC S MGR S+EQAVAWKVL +D+ HCLAF VNW+F+
Sbjct: 809 FTYLPGGVCKSSMGRQASYEQAVAWKVLSDDDAPHCLAFMLVNWTFM 855
>Os01g0200300 Hypothetical protein
Length = 394
Score = 349 bits (896), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 187/396 (47%), Positives = 251/396 (63%), Gaps = 18/396 (4%)
Query: 461 MLLQSVPPAVLVRFLREHRSEWADYNFDAYXXXXXXXXXXXLPGLRPMRFSGSQIIMPLA 520
MLLQ V P L++FLREHRS+WAD N DA+ LP R FSG Q+I+PLA
Sbjct: 1 MLLQDVSPPSLLQFLREHRSQWADSNLDAFFASTMKPNFCNLPMSRLGGFSG-QVILPLA 59
Query: 521 HTVENEEILEVVRLEGQALTHDDGLMSRDIHLLQLCTGIDEKSMGSCFQLVSAPIDELFP 580
HT E EE LEV++L G A + D L+ RD+ LLQ+ G++E S G+C +L+ APID F
Sbjct: 60 HTFEPEEFLEVIKL-GNASNYQDTLVHRDLFLLQMYNGVEESSAGTCSELIFAPIDASFS 118
Query: 581 DDAPLISSGFRVIPLDMKTDGTPAGRTLDLASSLEVGS---------TAQPTGDASMDDC 631
DD+PL+ SGFR+IP+D D + TLDLAS+LE + A+
Sbjct: 119 DDSPLLPSGFRIIPIDSPLDTSSPNCTLDLASTLEAATPRSRISGVNGGGGGCAAAAASS 178
Query: 632 NLRSVLTIAFQFPYEMHLQDSVATMAXXXXXXXXXXXXXXXMAISPSR----SGLNAGQK 687
+ ++V+TIAFQF ++ HLQDSVA MA +A+S SR A +
Sbjct: 179 SSKAVMTIAFQFAFDGHLQDSVAAMARQYMRNIISSVQRIAVALSSSRLVPPGAGAAAAQ 238
Query: 688 IISGFPEAPTLARWICQSYQFHLGVELLRQAD--DAGEALLKMLWDYEDAILCCSFKEKP 745
+ PEA TL RWICQSY+FH G EL++ D + E++LK +W + AILCCS K P
Sbjct: 239 LSPVTPEAATLPRWICQSYRFHFGDELIKSVDANSSNESILKAVWHHPSAILCCSLKAMP 298
Query: 746 VFTFANEMGLNMLETSLVALQDLSLDKIFDEAGRKALYNEIPKLMEQGYVYLPGGVCLSG 805
VFTFAN+ GL+MLET+LVALQD++L+K+FD+ GRK L E+P +MEQG + GGVC+S
Sbjct: 299 VFTFANQSGLDMLETTLVALQDMTLEKVFDDQGRKNLCTELPNIMEQGMACMEGGVCVSS 358
Query: 806 MGRHVSFEQAVAWKVL-GEDNNVHCLAFCFVNWSFV 840
+GR S+E+AVAWKV+ G+ HC+ F F+NW+F+
Sbjct: 359 VGRAASYEKAVAWKVVDGDGGGAHCICFMFINWTFL 394
>Os06g0722500
Length = 427
Score = 176 bits (447), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 33/227 (14%)
Query: 271 VPARDFWTLRYTTTMEDGSLVVCERXXXXXXXXXXTASAQQFVRAEMLPSGYLVRPCEGG 330
+PA +L + +L VCER Q F+R EMLPSG+L+RP +GG
Sbjct: 55 MPADGDGSLHLRIPHQHAALQVCERSLSSKQGGPSMPLVQPFIRDEMLPSGFLIRPSDGG 114
Query: 331 GSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAALRHIRQIAQETSGEVVYALGR 390
GS++HIVDH+DLE WSVPEV+RPLYESS +VAQK++ A+LR +RQ+A + + V+ GR
Sbjct: 115 GSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASLRCLRQVAYKDTRSVITGWGR 174
Query: 391 QPAVLRTFSQR-------------------------------LSRGFNDAISGFNDDGWS 419
+ A L SQ+ L RGFN+ ++G DDGWS
Sbjct: 175 KLAALHALSQKAHHVGLLNSRCFLVLAMNLQFKSVKNNFACSLFRGFNEVLNGLADDGWS 234
Query: 420 VMGGDGIEDVIIACNAKKVR--NTSTSANAFVTPGGVICAKASMLLQ 464
V+ DGI+DV I+ N+ KV N + S+ + GV+CAKASMLLQ
Sbjct: 235 VIESDGIDDVCISVNSSKVTGCNATFSSGLTIVSTGVLCAKASMLLQ 281
>Os06g0720500 Similar to CORONA
Length = 138
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 67/107 (62%), Positives = 82/107 (76%)
Query: 262 MQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXXXXXXXTASAQQFVRAEMLPSG 321
+Q+YAPTTL PA DFW LRYT+ + DGSLVVCER Q F+R EMLPSG
Sbjct: 30 LQLYAPTTLAPAHDFWLLRYTSILGDGSLVVCERSLSSKQGGPSMPLVQPFIRDEMLPSG 89
Query: 322 YLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTA 368
+L+RP +GGGS++HIVDH+DLE WSVPEV+RPLYESS +VAQK++ A
Sbjct: 90 FLIRPSDGGGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMA 136
>Os03g0769800 Similar to Homeodomain-leucine zipper protein interfascicular
fiberless 1 (Revoluta)
Length = 242
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 29 KYVRYTPEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQ-IKVWFQNRR 82
KYV YTP QVEALERVYAECPKP SRRQQLL + ILANIEPKQ IKVWF ++
Sbjct: 168 KYVHYTPGQVEALERVYAECPKPRFSRRQQLLCELSILANIEPKQKIKVWFPKQK 222
>Os08g0426000
Length = 249
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/41 (80%), Positives = 38/41 (92%)
Query: 35 PEQVEALERVYAECPKPSSSRRQQLLRDCPILANIEPKQIK 75
P +VEALERVY +CPKP+S+RRQQLL +CPILANIEPKQIK
Sbjct: 107 PLEVEALERVYTDCPKPTSARRQQLLCECPILANIEPKQIK 147
>Os04g0627000 Similar to Roc1
Length = 784
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 36/302 (11%)
Query: 200 GIVAVSHGCRGVAARACGLVNLEPTKIVEILKDRPSW---FRDCRS----LEVFTMFPAG 252
G+ +G R A+R +V + +VEIL D + F + S LEV + AG
Sbjct: 343 GLGPKQYGLRSEASRDSAVVIMTHANLVEILMDANQYAAVFSNIVSRAITLEVLSTGVAG 402
Query: 253 N-GGTIELVYMQMYAPTTLVPARDFWTLRYTTTMEDGSLVVCERXXXXXXXXXXTASAQQ 311
N G ++++ ++ P+ LVP R+ + +RY DG+ V + +
Sbjct: 403 NYNGALQVMSVEFQVPSPLVPTRESYFVRYCKQNADGTWAVVD-------VSLDSLRPSP 455
Query: 312 FVRAEMLPSGYLVRPCEGGGSIVHIVDHLDLEAWSVPEVLRPLYESSRVVAQKMTTAAL- 370
++ PSG L++ G S V V+H++++ SV + + L S + L
Sbjct: 456 VLKCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRSVHNIYKLLVNSGLAFGARRWVGTLD 515
Query: 371 RHIRQIAQETS--------GEVVYALGRQPAVLRTFSQRLSRGFNDAISGFNDDGWSVMG 422
R ++A + G + + GR+ + ++R+ F ++ W+ +
Sbjct: 516 RQCERLASVMASNIPTSDIGVITSSEGRKS--MLKLAERMVVSFCGGVTASVAHQWTTLS 573
Query: 423 GDGIEDVIIACNAKKVRNTSTSANAFVTPGGVICAKASMLLQSVPPAVLVRFLREH--RS 480
G G EDV + T S + P G++ A+ VPP + FLR+ RS
Sbjct: 574 GSGAEDVRVM--------TRKSVDDPGRPPGIVLNAATSFWLPVPPKRVFDFLRDESSRS 625
Query: 481 EW 482
EW
Sbjct: 626 EW 627
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.134 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 27,655,285
Number of extensions: 1144930
Number of successful extensions: 2571
Number of sequences better than 1.0e-10: 11
Number of HSP's gapped: 2566
Number of HSP's successfully gapped: 11
Length of query: 840
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 731
Effective length of database: 11,344,475
Effective search space: 8292811225
Effective search space used: 8292811225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 160 (66.2 bits)