Os12g0612700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to HD-Zip protein (Homeodomain transcription factor) (ATHB-14) (Homeodomain-leucine zipper protein 14).
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Os12g0612700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to HD-Zip protein (Homeodomain transcription factor) (ATHB-14) (Homeodomain-leucine zipper protein 14).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.87 | 0.404 | 8.83 | 0.0449 | 0.929 | -1.88 | -1.08 | -0.698 | 0.608 | 15.9 | 16.06 | 230 | -- | -- |
| 74.06 | 0.401 | 8.81 | 0.153 | 0.93 | -1.81 | -1.26 | -- | 0.64 | 15.9 | 17 | 238 | -- | -- |
| 76.46 | 0.407 | 8.84 | -0.0862 | 0.928 | -1.79 | -- | -1.3 | 0.597 | 16.2 | 16.83 | 244 | -- | -- |
| 77.47 | 0.41 | 8.82 | 0.141 | 0.979 | -1.74 | -- | -- | 0.651 | 16.3 | 19.3 | 252 | -- | -- |
| 87.55 | 0.436 | 8.82 | 0.0743 | -- | -1.58 | -- | -0.565 | 0.593 | -- | 4.965 | 1322 | -- | -- |
| 116.11 | 0.505 | 8.87 | -0.25 | 0.327 | -- | -1.63 | -- | 0.354 | 15 | -- | -- | -- | -- |
| 124.78 | 0.523 | 8.88 | -0.286 | 0.336 | -- | -- | -- | 0.345 | 15.8 | -- | -- | -- | -- |
| 87.18 | 0.435 | 8.81 | 0.181 | -- | -1.31 | -- | -- | 0.633 | -- | 18.34 | 1340 | -- | -- |
| 77.76 | 0.411 | 8.82 | -- | 0.955 | -1.66 | -- | -- | 0.62 | 16.3 | 19.5 | 242 | -- | -- |
| 131 | 0.535 | 8.87 | -0.3 | -- | -- | -- | -- | 0.336 | -- | -- | -- | -- | -- |
| 126.93 | 0.527 | 8.87 | -- | 0.342 | -- | -- | -- | 0.377 | 15.8 | -- | -- | -- | -- |
| 87.77 | 0.436 | 8.82 | -- | -- | -1.2 | -- | -- | 0.595 | -- | 18.96 | 1352 | -- | -- |
| 133.37 | 0.539 | 8.87 | -- | -- | -- | -- | -- | 0.369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 58.25 | temperature | 20 | 720 | > th | dose dependent | rect. | 22 | 14 |
| 12 | 60.54 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 122 | 66.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 143 | 67.29 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 10 |
| 147 | 67.41 | temperature | 15 | 270 | > th | dose dependent | rect. | 22 | 22 |
| 148 | 67.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 4 |
| 149 | 67.47 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 231 | 69.34 | temperature | 30 | 720 | < th | dose dependent | rect. | 21 | 16 |
| 240 | 69.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 15 |
| 254 | 69.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 20 |
| 476 | 72.55 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 479 | 72.58 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 484 | 72.66 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 3 |
| 495 | 72.72 | temperature | 25 | 720 | > th | dose independent | rect. | 5 | 5 |
| 507 | 72.80 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 668 | 73.48 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 679 | 73.50 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 795 | 73.81 | temperature | 25 | 720 | < th | dose independent | rect. | 5 | 4 |
| 892 | 74.08 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 933 | 74.16 | temperature | 20 | 1440 | > th | dose dependent | rect. | 3 | 23 |
| 934 | 74.17 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 957 | 74.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |