Os03g0769800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Homeodomain-leucine zipper protein interfascicular fiberless 1 (Revoluta).
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Os03g0769800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Homeodomain-leucine zipper protein interfascicular fiberless 1 (Revoluta).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 245.51 | 0.736 | 5.13 | 0.543 | 2.43 | 2.47 | 1.17 | 3.04 | 0.159 | 22.8 | 19.29 | 589 | 23.5 | -- |
| 251.87 | 0.739 | 5.18 | 0.0151 | 2.37 | 2.43 | 0.732 | -- | 0.00845 | 22.5 | 20.14 | 605 | 0.0201 | -- |
| 249.6 | 0.736 | 5.13 | 0.441 | 2.34 | 2.55 | -- | 2.57 | 0.131 | 23.1 | 19.88 | 588 | 23.2 | -- |
| 253.57 | 0.742 | 5.19 | -0.0276 | 2.27 | 2.43 | -- | -- | 0.00725 | 22.7 | 20.49 | 600 | 23.7 | -- |
| 405.79 | 0.938 | 5.05 | 0.521 | -- | 2.38 | -- | 2.16 | 0.393 | -- | 22.75 | 2301 | 21.4 | -- |
| 355.68 | 0.884 | 5.08 | 0.592 | 1.83 | -- | 1.16 | -- | 0.468 | 21 | -- | -- | -- | -- |
| 360.12 | 0.889 | 5.08 | 0.549 | 1.82 | -- | -- | -- | 0.466 | 21.1 | -- | -- | -- | -- |
| 303.15 | 0.811 | 5.09 | 0.0801 | -- | 3.02 | -- | -- | 0.161 | -- | -37.35 | 1286 | 20.1 | -- |
| 253.51 | 0.742 | 5.19 | -- | 2.31 | 2.5 | -- | -- | 0.00234 | 22.8 | 20.28 | 593 | 23.6 | -- |
| 550.89 | 1.1 | 5.03 | 0.554 | -- | -- | -- | -- | 0.456 | -- | -- | -- | -- | -- |
| 368.07 | 0.897 | 5.09 | -- | 1.82 | -- | -- | -- | 0.405 | 21.1 | -- | -- | -- | -- |
| 300.19 | 0.807 | 5.1 | -- | -- | 3.2 | -- | -- | 0.156 | -- | -100.3 | 1362 | 20.5 | -- |
| 558.99 | 1.1 | 5.04 | -- | -- | -- | -- | -- | 0.395 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 236.76 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 21 | 248.82 | temperature | 20.0 | 720 | > th | dose dependent | sin | 6 | NA |
| 23 | 249.25 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 8 |
| 32 | 250.55 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 1 | 10 |
| 55 | 253.55 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 56 | 253.87 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 66 | 254.56 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 68 | 254.60 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 95 | 256.09 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 3 | 15 |
| 117 | 257.32 | temperature | 30.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 219 | 261.59 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 264 | 263.25 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 3 | 17 |
| 443 | 268.77 | radiation | 1.0 | 1440 | > th | dose dependent | rect. | 16 | 2 |
| 456 | 269.07 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 12 |
| 465 | 269.25 | radiation | 40.0 | 1440 | < th | dose dependent | rect. | 16 | 10 |
| 489 | 269.44 | radiation | 30.0 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 506 | 269.65 | temperature | 25.0 | 4320 | > th | dose dependent | rect. | 4 | 5 |
| 614 | 271.01 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 14 |
| 642 | 271.31 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 647 | 271.39 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 4 |
| 675 | 271.72 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 678 | 271.81 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 18 |
| 693 | 271.99 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 18 |
| 718 | 272.14 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 2 |
| 724 | 272.21 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 9 |
| 725 | 272.22 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 7 |
| 727 | 272.22 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 730 | 272.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 11 |
| 731 | 272.23 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 15 |
| 800 | 272.72 | temperature | 25.0 | 720 | < th | dose independent | rect. | 5 | 6 |
| 827 | 272.87 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 17 |
| 829 | 272.88 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 831 | 272.91 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 833 | 272.92 | temperature | 30.0 | 14400 | > th | dose independent | sin | 12 | NA |
| 841 | 272.98 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 862 | 273.17 | temperature | 30.0 | 14400 | < th | dose independent | sin | 12 | NA |
| 872 | 273.23 | temperature | 20.0 | 4320 | > th | dose dependent | sin | 7 | NA |
| 970 | 273.86 | temperature | 30.0 | 720 | < th | dose independent | rect. | 17 | 19 |