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Os01g0200300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.08 (0.0286) R2 : 0.486
β1 : -0.863 (0.104) R2dD : 0.0804 R2D : 0.0628
β2 : 1.16 (0.073) R2dC : 0.291 R2C : 0.259
β3 : -0.91 (0.0878) R2dE : 0.14 R2E : 0.104
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0953 (0.064) R2dN8 : 0.00349 R2N8 : 0.0204
σ : 0.527
deviance : 128.01
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C
peak time of C : 7.31
E
wheather : radiation
threshold : 31.38
memory length : 1361
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
125.99 0.527 6.1 -0.994 1.13 -0.933 0.374 1 0.0386 7.06 33.23 1400 -- --
127.79 0.526 6.08 -0.876 1.12 -0.91 0.425 -- 0.0672 7.16 30.33 1389 -- --
126.26 0.523 6.1 -0.983 1.14 -0.942 -- 0.986 0.0384 7.18 32.28 1388 -- --
128.01 0.527 6.08 -0.863 1.16 -0.91 -- -- 0.0953 7.31 31.38 1361 -- --
192.41 0.646 6.11 -0.943 -- -0.885 -- 0.779 0.0749 -- 54.83 1435 -- --
156.54 0.587 6.03 -0.716 1.12 -- 0.531 -- 0.313 6.69 -- -- -- --
157.21 0.587 6.03 -0.706 1.12 -- -- -- 0.312 6.78 -- -- -- --
193.78 0.648 6.1 -0.829 -- -0.885 -- -- 0.105 -- 28.37 1446 -- --
146.31 0.563 6.05 -- 1.15 -0.849 -- -- 0.208 7.45 70 1318 -- --
223.1 0.698 6.05 -0.681 -- -- -- -- 0.334 -- -- -- -- --
170.35 0.611 6.01 -- 1.11 -- -- -- 0.391 6.82 -- -- -- --
210.82 0.676 6.11 -- -- -0.851 -- -- 0.194 -- 20 1463 -- --
235.34 0.716 6.04 -- -- -- -- -- 0.409 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 124.61 radiation 20 1440 < th dose independent sin 13 NA
2 124.73 radiation 20 1440 < th dose independent rect. 11 21
3 124.79 radiation 20 1440 < th dose independent rect. 13 19
5 124.82 radiation 20 1440 < th dose independent rect. 15 17
7 125.08 temperature 25 720 > th dose dependent rect. 18 5
13 125.49 humidity 90 720 < th dose dependent rect. 18 5
17 125.70 radiation 20 1440 > th dose dependent rect. 16 16
20 125.78 radiation 20 1440 > th dose independent rect. 15 17
22 125.86 radiation 30 1440 < th dose dependent rect. 11 22
26 125.95 radiation 30 1440 < th dose dependent rect. 15 23
33 126.18 radiation 30 1440 < th dose dependent rect. 13 20
36 126.29 radiation 20 1440 < th dose independent rect. 15 2
40 126.32 radiation 20 1440 < th dose independent rect. 15 23
43 126.39 radiation 20 1440 > th dose independent sin 12 NA
45 126.42 radiation 1 1440 > th dose dependent rect. 15 23
47 126.43 radiation 1 1440 > th dose dependent rect. 10 23
48 126.44 radiation 20 1440 > th dose independent rect. 15 22
50 126.44 radiation 30 1440 < th dose dependent rect. 13 23
53 126.48 radiation 30 1440 < th dose dependent sin 13 NA
66 126.53 radiation 30 1440 < th dose dependent rect. 24 18
68 126.54 radiation 20 1440 < th dose independent rect. 15 14
71 126.55 radiation 30 1440 < th dose dependent rect. 2 16
86 126.57 radiation 30 1440 < th dose dependent no NA NA
92 126.57 radiation 30 1440 < th dose dependent rect. 2 23
93 126.57 radiation 30 1440 < th dose dependent rect. 5 23
107 126.59 radiation 30 1440 < th dose dependent rect. 5 13
121 126.60 radiation 30 1440 < th dose dependent rect. 5 20
146 126.65 radiation 20 1440 < th dose independent rect. 15 10
151 126.66 radiation 1 1440 > th dose dependent rect. 13 23
154 126.68 radiation 20 1440 < th dose independent rect. 11 6
160 126.69 radiation 20 1440 < th dose independent rect. 11 17
178 126.72 radiation 30 1440 < th dose dependent rect. 15 17
180 126.73 radiation 20 1440 < th dose independent rect. 11 14
210 126.78 radiation 1 1440 > th dose dependent sin 12 NA
228 126.88 radiation 1 1440 > th dose dependent rect. 13 20
230 126.89 radiation 1 1440 > th dose dependent rect. 5 13
234 126.90 radiation 1 1440 > th dose dependent no NA NA
302 126.92 radiation 20 1440 < th dose independent rect. 13 4
306 126.95 radiation 20 1440 < th dose independent rect. 13 15
311 126.96 radiation 20 1440 < th dose independent rect. 24 17
314 126.96 radiation 20 1440 < th dose independent rect. 22 20
317 126.97 radiation 20 1440 < th dose independent rect. 2 16
324 126.97 radiation 20 1440 < th dose independent rect. 6 22
353 126.98 radiation 20 1440 < th dose independent rect. 6 12
369 126.98 radiation 20 1440 < th dose independent rect. 2 23
377 126.99 radiation 20 1440 < th dose independent no NA NA
388 126.99 radiation 20 1440 < th dose independent rect. 6 19
402 127.00 radiation 20 1440 < th dose independent rect. 13 12
423 127.01 radiation 20 1440 < th dose independent rect. 13 10
673 127.25 radiation 30 1440 < th dose dependent sin 0 NA
680 127.27 radiation 1 1440 > th dose dependent sin 1 NA
685 127.29 radiation 20 1440 > th dose independent rect. 11 22
702 127.37 radiation 30 4320 < th dose independent rect. 7 1
920 127.60 humidity 80 720 < th dose dependent rect. 18 14
966 127.69 radiation 30 4320 < th dose independent rect. 24 8