BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0328900 Os04g0328900|Os04g0328900
(99 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0328900 Pollen allergen Lol p2 family protein 197 2e-51
Os04g0317800 Pollen allergen Lol p2 family protein 167 1e-42
Os04g0329300 Pollen allergen Lol p2 family protein 166 4e-42
Os04g0317400 Pollen allergen Lol p2 family protein 165 5e-42
Os04g0317500 Pollen allergen Lol p2 family protein 164 1e-41
Os04g0329200 Pollen allergen Lol p2 family protein 162 4e-41
Os06g0663300 Pollen allergen Lol p2 family protein 157 2e-39
Os06g0662600 Pollen allergen Lol p2 family protein 156 3e-39
Os06g0662500 Pollen allergen Lol p2 family protein 156 3e-39
AK105508 155 8e-39
Os06g0655200 Pollen allergen Lol p2 family protein 154 2e-38
Os06g0662800 Pollen allergen Lol p2 family protein 151 1e-37
Os06g0662750 142 8e-35
Os06g0662300 Pollen allergen Lol p2 family protein 137 2e-33
Os06g0662700 Pollen allergen Lol p2 family protein 135 7e-33
Os06g0662900 Pollen allergen/expansin, C-terminal domain co... 79 5e-16
Os03g0106700 Similar to Beta-expansin 66 5e-12
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 65 1e-11
Os03g0106900 Beta-expansin precursor (Beta-expansin 1) 65 2e-11
Os03g0106500 Beta-expansin precursor (Beta-expansin 1) 65 2e-11
>Os04g0328900 Pollen allergen Lol p2 family protein
Length = 99
Score = 197 bits (500), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/99 (100%), Positives = 99/99 (100%)
Query: 1 MARGSASAKHEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESP 60
MARGSASAKHEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESP
Sbjct: 1 MARGSASAKHEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESP 60
Query: 61 LKGPFSVRFLVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LKGPFSVRFLVKNSGYRVVDDIIPESFTAGSEYKSGIQL
Sbjct: 61 LKGPFSVRFLVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
>Os04g0317800 Pollen allergen Lol p2 family protein
Length = 117
Score = 167 bits (423), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/90 (92%), Positives = 87/90 (96%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+VA+GSSAKSLELVTNVAIS+VEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF
Sbjct: 28 FKVAEGSSAKSLELVTNVAISEVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IP SFTAGSEYKSGIQL
Sbjct: 88 LVKNGGYRVVDDVIPGSFTAGSEYKSGIQL 117
>Os04g0329300 Pollen allergen Lol p2 family protein
Length = 117
Score = 166 bits (420), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 87/90 (96%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+VA+GSSA SLELVTNVAIS+VE+KEKGGKDWVALKESSSNTWT+KSE+PLKGPFSVRF
Sbjct: 28 FKVAEGSSASSLELVTNVAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGIQL
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0317400 Pollen allergen Lol p2 family protein
Length = 117
Score = 165 bits (418), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 87/90 (96%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+VA+GSSA SLELVTN+AIS+VE+KEKGGKDWVALKESSSNTWT+KSE+PLKGPFSVRF
Sbjct: 28 FKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGIQL
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0317500 Pollen allergen Lol p2 family protein
Length = 117
Score = 164 bits (415), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 80/90 (88%), Positives = 85/90 (94%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+VA+GSSA SLELVTNVAIS+VEVKEKGGKDWV LKES SNTWTLKSE+PLKGPFSVRF
Sbjct: 28 FKVAEGSSATSLELVTNVAISEVEVKEKGGKDWVGLKESGSNTWTLKSEAPLKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGIQL
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0329200 Pollen allergen Lol p2 family protein
Length = 117
Score = 162 bits (411), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/89 (88%), Positives = 85/89 (95%)
Query: 11 EVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFL 70
+VA+GSSA SLELVTNVAIS+VEVKEKGGKDWV LKES SNTWTLKS++PLKGPFSVRFL
Sbjct: 29 KVAEGSSATSLELVTNVAISEVEVKEKGGKDWVGLKESGSNTWTLKSDAPLKGPFSVRFL 88
Query: 71 VKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
VKN GYRVVDD+IPESFTAGSEYKSGIQL
Sbjct: 89 VKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os06g0663300 Pollen allergen Lol p2 family protein
Length = 117
Score = 157 bits (396), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 84/90 (93%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V +GSS KSLELVTNVAIS+VE+KEKGGKDWVALKESS+NTW+LKSE+ LKGPFSVRF
Sbjct: 28 FKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGI +
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGINV 117
>Os06g0662600 Pollen allergen Lol p2 family protein
Length = 117
Score = 156 bits (395), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 84/90 (93%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V +GSS KSLELVTNVAIS+VE+KEKGGKDWVALKESS+NTW+LKSE+ LKGPFSVRF
Sbjct: 28 FKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGI +
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGINI 117
>Os06g0662500 Pollen allergen Lol p2 family protein
Length = 117
Score = 156 bits (394), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 75/90 (83%), Positives = 84/90 (93%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V +GSS KSLELVTNVAIS+VE+KEKGGKDWVALKESS+NTW+LKSE+ LKGPFSVRF
Sbjct: 28 FKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGSEYKSGI +
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGINV 117
>AK105508
Length = 145
Score = 155 bits (391), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 73/89 (82%), Positives = 84/89 (94%)
Query: 11 EVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFL 70
+V +GSS KSLELVTN+AIS+VE+KEKGGKDWVALKESS+NTW+LKSE+ LKGPFSVRFL
Sbjct: 57 KVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKSEATLKGPFSVRFL 116
Query: 71 VKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
VKN GYRVVDD+IPESFTAG+EYKSGI +
Sbjct: 117 VKNGGYRVVDDVIPESFTAGTEYKSGINI 145
>Os06g0655200 Pollen allergen Lol p2 family protein
Length = 117
Score = 154 bits (388), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 74/90 (82%), Positives = 81/90 (90%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V +GSSA SLEL+TNVAIS+VE+KEKG DW ALKESSSNTWT+KS SPLKGPFSVRF
Sbjct: 28 FKVNEGSSATSLELITNVAISEVEIKEKGASDWTALKESSSNTWTIKSGSPLKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYRVVDD+IPESFTAGS YKSGIQL
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSVYKSGIQL 117
>Os06g0662800 Pollen allergen Lol p2 family protein
Length = 228
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 71/90 (78%), Positives = 81/90 (90%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V + SS KSLELVTNVAISKVE+KEKG KDWV LKESS+NTWT+KSE+PLKGPFS+RF
Sbjct: 139 FKVGEASSGKSLELVTNVAISKVEIKEKGSKDWVTLKESSTNTWTIKSEAPLKGPFSIRF 198
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
L KN GYRVVDD+IPESFTAGS+YKSGI +
Sbjct: 199 LAKNGGYRVVDDVIPESFTAGSKYKSGINI 228
Score = 151 bits (381), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/86 (84%), Positives = 81/86 (94%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
+V +GSS KSLELVTNVAIS+VE+KEKGGKDWVALKESS+NTW+LKSE+ LKGPFSVRF
Sbjct: 28 FKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPFSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKS 95
LVKN GYRVVDD+IPESFTAGSEYKS
Sbjct: 88 LVKNGGYRVVDDVIPESFTAGSEYKS 113
>Os06g0662750
Length = 84
Score = 142 bits (357), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/81 (81%), Positives = 77/81 (95%)
Query: 19 KSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFLVKNSGYRV 78
+SLELVTNVAIS+VE++EKGGKDWVALKESS+NT T+KSE+PLKGPFSVRFLVKN GYRV
Sbjct: 4 QSLELVTNVAISEVEIREKGGKDWVALKESSTNTCTIKSEAPLKGPFSVRFLVKNGGYRV 63
Query: 79 VDDIIPESFTAGSEYKSGIQL 99
VD++IPESF AGS+YKSGI +
Sbjct: 64 VDNVIPESFMAGSKYKSGINI 84
>Os06g0662300 Pollen allergen Lol p2 family protein
Length = 118
Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 77/90 (85%)
Query: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
++ + S+ +LEL+TNVAIS+VE+KEKGG DW LKESS+NTW +KS++PLKGP SVRF
Sbjct: 28 FKIGESSTTSTLELITNVAISEVEIKEKGGSDWRGLKESSANTWKIKSDAPLKGPLSVRF 87
Query: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
LVKN GYR+VDD+IPE+F AGS YKSGIQ+
Sbjct: 88 LVKNGGYRIVDDVIPETFKAGSVYKSGIQV 117
>Os06g0662700 Pollen allergen Lol p2 family protein
Length = 105
Score = 135 bits (340), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 67/89 (75%), Positives = 77/89 (86%)
Query: 11 EVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFL 70
+V +GSS SLELVTNV IS+VEVKEKGGK WV LKESS+NTWTLKSE+ LKG FSVRFL
Sbjct: 17 KVGEGSSDTSLELVTNVTISEVEVKEKGGKYWVGLKESSTNTWTLKSEALLKGSFSVRFL 76
Query: 71 VKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
VKN Y V+D++IPESFTAG+EYK+GI L
Sbjct: 77 VKNGSYHVIDNVIPESFTAGTEYKNGINL 105
>Os06g0662900 Pollen allergen/expansin, C-terminal domain containing protein
Length = 140
Score = 79.3 bits (194), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 37/47 (78%), Positives = 45/47 (95%)
Query: 11 EVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKS 57
+V +GSS KSLELVTN+AIS+VE+KEKGGKDWVALKESS+NTW+LK+
Sbjct: 29 KVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
>Os03g0106700 Similar to Beta-expansin
Length = 228
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 4/90 (4%)
Query: 13 AKGSSAKSLELVTNVA----ISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVR 68
A K EL+ VA + +VE+KEKG ++W ALKES W + + PLKGPFSVR
Sbjct: 137 AMAKDGKDEELLKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVR 196
Query: 69 FLVKNSGYRVVDDIIPESFTAGSEYKSGIQ 98
+ + +D IP+ + A S YKS +Q
Sbjct: 197 VTTEGGEKIIAEDAIPDGWKADSVYKSNVQ 226
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 64.7 bits (156), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 5/101 (4%)
Query: 4 GSASAKHEVAKGSSAKSLELVTNVA-----ISKVEVKEKGGKDWVALKESSSNTWTLKSE 58
G V KGS+ ++ + KVE+KEKG ++W L ES W + +
Sbjct: 166 GETKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTP 225
Query: 59 SPLKGPFSVRFLVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
PLKGPFS+R ++ V +D+IP+++ A + YKS IQ+
Sbjct: 226 KPLKGPFSLRVTTESDQKLVANDVIPDNWKANALYKSEIQV 266
>Os03g0106900 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 29 ISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFLVKNSGYRVVDDIIPESFT 88
+ +VE+KEKG ++W ALKES W + + PLKGPFSVR + + +D IP+ +
Sbjct: 196 VVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEKIIAEDAIPDGWK 255
Query: 89 AGSEYKSGIQ 98
A S YKS +Q
Sbjct: 256 ADSVYKSNVQ 265
>Os03g0106500 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 44/70 (62%)
Query: 29 ISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRFLVKNSGYRVVDDIIPESFT 88
+ +VE+KEKG ++W ALKES W + + PLKGPFSVR + + +D IP+ +
Sbjct: 196 VVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEKIIAEDAIPDGWK 255
Query: 89 AGSEYKSGIQ 98
A S YKS +Q
Sbjct: 256 ADSVYKSNVQ 265
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.307 0.124 0.337
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,075,703
Number of extensions: 103310
Number of successful extensions: 262
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 261
Number of HSP's successfully gapped: 21
Length of query: 99
Length of database: 17,035,801
Length adjustment: 68
Effective length of query: 31
Effective length of database: 13,485,249
Effective search space: 418042719
Effective search space used: 418042719
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 149 (62.0 bits)