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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os06g0662800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pollen allergen Lol p2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.86 (0.0134) R2 : 0.00907
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0577 (0.0282) R2dN8 : 0.0117 R2N8 : 0.00907
σ : 0.252
deviance : 29.24
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.86 0.248 2.87 -0.0995 0.00335 -0.185 -0.2 0.771 0.0437 3.84 1.116 16 -- --
28.27 0.248 2.86 -0.0736 0.00361 -0.132 0.313 -- 0.0558 15.8 1.322 15 -- --
27.97 0.246 2.87 -0.0983 0.0104 -0.179 -- 0.86 0.0425 5.01 1.1 16 -- --
28.56 0.249 2.86 -0.0674 0.00809 -0.119 -- -- 0.0569 5.05 1.4 15 -- --
27.97 0.246 2.87 -0.0998 -- -0.187 -- 0.847 0.044 -- 1.153 16 -- --
28.82 0.252 2.86 -0.0455 0.0571 -- -0.277 -- 0.0501 4.52 -- -- -- --
29.01 0.252 2.86 -0.0433 0.0595 -- -- -- 0.0516 5.72 -- -- -- --
28.57 0.249 2.86 -0.0678 -- -0.123 -- -- 0.0578 -- 1.373 15 -- --
28.67 0.249 2.86 -- 0.019 -0.102 -- -- 0.0655 5.86 1.3 15 -- --
29.19 0.252 2.86 -0.0414 -- -- -- -- 0.0531 -- -- -- -- --
29.06 0.252 2.86 -- 0.0588 -- -- -- 0.0565 5.76 -- -- -- --
28.68 0.249 2.86 -- -- -0.114 -- -- 0.0648 -- 1.345 15 -- --
29.24 0.252 2.86 -- -- -- -- -- 0.0577 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 24.80 temperature 20.0 30 > th dose dependent rect. 2 1
2 24.83 atmosphere 1005.0 30 > th dose dependent rect. 2 1
3 24.85 temperature 20.0 30 > th dose independent rect. 2 1
5 24.86 atmosphere 1005.0 30 > th dose independent rect. 2 1
6 24.86 wind 3.0 30 < th dose dependent rect. 2 1
11 24.89 wind 3.0 30 < th dose independent rect. 2 1
15 24.92 humidity 80.0 30 > th dose independent rect. 2 1
18 24.94 humidity 50.0 30 > th dose dependent rect. 2 1
22 24.95 temperature 10.0 30 > th dose independent rect. 2 1
24 24.95 temperature 30.0 30 < th dose independent rect. 2 1
25 24.95 humidity 50.0 30 > th dose independent rect. 2 1
29 24.95 atmosphere 1010.0 30 < th dose independent rect. 2 1
31 24.95 radiation 1.0 30 < th dose independent rect. 2 1
36 24.95 precipitation 0.1 30 < th dose independent rect. 2 1
37 24.95 temperature 10.0 30 > th dose independent rect. 3 23
39 24.95 radiation 1.0 30 < th dose dependent rect. 2 1
44 24.95 precipitation 0.1 30 < th dose dependent rect. 2 1
49 25.12 atmosphere 1015.0 30 < th dose dependent rect. 2 1
50 25.22 temperature 30.0 30 < th dose dependent rect. 2 1
56 25.38 wind 1.0 30 > th dose independent rect. 2 1
99 25.81 radiation 10.0 10 > th dose independent rect. 6 1
125 25.81 radiation 10.0 10 > th dose dependent rect. 6 1
153 25.91 radiation 1.0 14400 < th dose dependent rect. 3 1
155 25.94 wind 9.0 30 < th dose independent rect. 3 23
168 25.98 wind 9.0 1440 < th dose independent rect. 3 1
169 25.98 temperature 10.0 1440 > th dose independent rect. 3 1
172 25.98 temperature 30.0 1440 < th dose independent rect. 3 1
176 25.98 humidity 50.0 1440 > th dose independent rect. 3 1
185 25.98 atmosphere 995.0 1440 > th dose independent rect. 3 1
186 25.98 radiation 1.0 1440 < th dose independent rect. 3 1
206 25.98 temperature 10.0 1440 > th dose independent rect. 4 23
231 26.43 atmosphere 995.0 30 > th dose independent rect. 3 23
262 26.54 precipitation 0.1 30 < th dose independent rect. 3 23
264 26.54 precipitation 0.1 30 < th dose dependent rect. 3 23
284 26.92 wind 3.0 30 < th dose dependent rect. 6 1
286 26.96 atmosphere 1005.0 30 > th dose dependent rect. 6 1
303 27.20 humidity 80.0 30 > th dose dependent rect. 6 1
348 27.27 wind 3.0 10 < th dose dependent rect. 2 6
358 27.30 temperature 20.0 90 < th dose dependent rect. 2 1
426 27.34 temperature 30.0 30 < th dose dependent rect. 6 1
432 27.38 humidity 50.0 30 > th dose independent rect. 3 23
440 27.43 atmosphere 1005.0 30 > th dose dependent rect. 2 5
457 27.49 wind 3.0 30 < th dose independent rect. 6 1
474 27.54 temperature 30.0 30 < th dose independent rect. 3 23
482 27.57 wind 1.0 30 > th dose independent rect. 4 22
494 27.60 radiation 10.0 10 < th dose independent rect. 2 6
498 27.61 wind 9.0 1440 < th dose independent rect. 7 1
500 27.61 temperature 10.0 1440 > th dose independent rect. 7 1
504 27.61 temperature 30.0 1440 < th dose independent rect. 7 1
508 27.61 humidity 50.0 1440 > th dose independent rect. 7 1
513 27.61 atmosphere 995.0 1440 > th dose independent rect. 7 1
514 27.61 atmosphere 1015.0 1440 < th dose independent rect. 7 1
515 27.61 wind 3.0 10 < th dose independent rect. 2 6
517 27.61 temperature 10.0 1440 > th dose independent rect. 8 23
524 27.62 temperature 25.0 10 > th dose independent rect. 6 1
532 27.63 humidity 90.0 30 < th dose independent rect. 6 1
534 27.63 atmosphere 1000.0 30 > th dose independent rect. 2 19
535 27.63 wind 1.0 10 > th dose independent rect. 7 23
539 27.64 humidity 80.0 30 > th dose independent rect. 6 1
540 27.64 atmosphere 1005.0 30 > th dose independent rect. 6 1
544 27.64 radiation 40.0 10 < th dose dependent rect. 2 6
545 27.65 wind 1.0 30 > th dose independent rect. 6 1
549 27.65 temperature 10.0 30 > th dose independent rect. 6 1
551 27.65 temperature 30.0 30 < th dose independent rect. 6 1
552 27.65 humidity 50.0 30 > th dose independent rect. 6 1
555 27.65 atmosphere 995.0 30 > th dose independent rect. 6 1
556 27.65 atmosphere 1015.0 30 < th dose independent rect. 6 1
557 27.65 radiation 20.0 30 < th dose independent rect. 6 1
560 27.65 precipitation 0.1 30 < th dose independent rect. 6 1
562 27.65 atmosphere 1010.0 10 < th dose independent rect. 4 22
563 27.65 temperature 10.0 30 > th dose independent rect. 7 23
566 27.65 precipitation 0.1 30 < th dose dependent rect. 6 1
567 27.65 radiation 20.0 10 < th dose dependent rect. 2 6
570 27.66 radiation 10.0 10 < th dose dependent rect. 6 1
572 27.67 temperature 10.0 720 > th dose independent rect. 7 8
573 27.67 atmosphere 1015.0 720 < th dose independent rect. 7 8
574 27.67 temperature 10.0 720 > th dose independent rect. 15 16
576 27.67 temperature 10.0 30 > th dose dependent rect. 2 5
582 27.68 radiation 10.0 10 < th dose independent rect. 14 12
601 27.70 atmosphere 1000.0 30 > th dose independent rect. 21 5
603 27.70 precipitation 0.1 10 < th dose independent rect. 2 19
607 27.70 precipitation 0.1 10 < th dose dependent rect. 2 19
610 27.71 wind 9.0 30 < th dose independent rect. 21 5
611 27.71 temperature 10.0 30 > th dose independent rect. 21 5
612 27.71 temperature 10.0 1440 > th dose independent rect. 22 5
615 27.71 temperature 30.0 30 < th dose independent rect. 21 5
616 27.71 temperature 30.0 1440 < th dose independent rect. 22 5
620 27.71 humidity 80.0 10 > th dose independent rect. 2 5
622 27.71 humidity 50.0 30 > th dose independent rect. 21 5
625 27.71 humidity 50.0 1440 > th dose independent rect. 22 5
634 27.71 atmosphere 995.0 1440 > th dose independent rect. 22 5
635 27.71 radiation 1.0 30 < th dose independent rect. 21 5
640 27.71 radiation 1.0 1440 < th dose independent rect. 22 5
660 27.71 precipitation 0.1 30 < th dose independent rect. 21 5
662 27.71 wind 9.0 720 < th dose independent rect. 19 8
664 27.71 atmosphere 1000.0 10 > th dose independent rect. 8 18
665 27.71 temperature 10.0 30 > th dose independent rect. 2 19
667 27.71 temperature 10.0 1440 > th dose independent rect. 3 19
671 27.71 atmosphere 1015.0 30 < th dose independent rect. 2 19
674 27.71 radiation 1.0 30 < th dose dependent rect. 21 5
679 27.71 radiation 1.0 1440 < th dose dependent rect. 22 5
688 27.71 precipitation 0.1 30 < th dose dependent rect. 21 5
698 27.72 radiation 40.0 10 < th dose independent rect. 2 6
699 27.72 precipitation 0.1 10 < th dose independent rect. 2 6
701 27.72 atmosphere 995.0 720 > th dose independent rect. 15 16
709 27.72 precipitation 0.1 10 < th dose dependent rect. 2 6
723 27.73 atmosphere 1000.0 10 > th dose independent rect. 2 6
724 27.73 atmosphere 995.0 720 > th dose independent rect. 7 8
744 27.74 wind 9.0 1440 < th dose independent rect. 3 5
746 27.74 temperature 10.0 1440 > th dose independent rect. 3 5
749 27.74 temperature 30.0 1440 < th dose independent rect. 3 5
753 27.74 humidity 50.0 1440 > th dose independent rect. 3 5
758 27.74 atmosphere 995.0 1440 > th dose independent rect. 3 5
762 27.74 temperature 10.0 10 > th dose independent rect. 2 6
764 27.74 temperature 30.0 10 < th dose independent rect. 2 6
765 27.74 humidity 50.0 10 > th dose independent rect. 2 6
768 27.74 atmosphere 1015.0 10 < th dose independent rect. 2 6
770 27.74 temperature 10.0 720 > th dose independent rect. 19 8
771 27.74 temperature 30.0 720 < th dose independent rect. 19 8
772 27.74 humidity 50.0 720 > th dose independent rect. 19 8
773 27.74 atmosphere 995.0 720 > th dose independent rect. 19 8
774 27.74 radiation 1.0 720 < th dose independent rect. 19 8
780 27.74 temperature 10.0 720 > th dose independent rect. 3 16
781 27.74 wind 9.0 10 < th dose independent rect. 8 18
782 27.74 temperature 10.0 10 > th dose independent rect. 8 18
783 27.74 precipitation 0.1 10 < th dose independent rect. 8 18
784 27.74 temperature 10.0 1440 > th dose independent rect. 8 19
789 27.74 humidity 50.0 10 > th dose dependent rect. 2 6
793 27.74 radiation 1.0 720 < th dose dependent rect. 19 8
798 27.74 precipitation 0.1 10 < th dose dependent rect. 8 18
803 27.75 wind 9.0 30 < th dose independent rect. 2 19
805 27.75 temperature 10.0 30 > th dose dependent rect. 6 1
853 27.76 radiation 20.0 10 < th dose dependent rect. 15 11
855 27.76 radiation 40.0 10 < th dose dependent rect. 14 12
861 27.77 precipitation 0.1 720 < th dose independent rect. 7 8
877 27.77 precipitation 0.1 720 < th dose dependent rect. 7 8
911 27.78 atmosphere 1000.0 270 > th dose independent rect. 22 23
970 27.80 temperature 30.0 30 < th dose independent rect. 2 19
973 27.80 wind 9.0 30 < th dose independent rect. 7 23
977 27.80 wind 9.0 30 < th dose dependent rect. 21 5
992 27.81 atmosphere 995.0 720 > th dose independent rect. 3 16
994 27.81 humidity 50.0 30 > th dose independent rect. 2 19