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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os04g0317400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Pollen allergen Lol p2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.1 (0.0374) R2 : 0.000278
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0281 (0.0788) R2dN8 : 0.000359 R2N8 : 0.000278
σ : 0.705
deviance : 228.1
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
207.68 0.677 3.11 -0.413 0.306 0.386 -1.15 1.57 -0.0885 5.1 45.89 10 -- --
212.59 0.679 3.11 -0.385 0.296 0.386 -1.4 -- -0.0872 4.44 45.8 10 -- --
210.93 0.676 3.11 -0.417 0.299 0.368 -- 1.73 -0.0838 5.48 45.92 9 -- --
217.48 0.687 3.11 -0.378 0.298 0.321 -- -- -0.0763 5.5 46.24 10 -- --
215.55 0.684 3.11 -0.406 -- 0.331 -- 1.71 -0.0752 -- 45.83 9 -- --
216.33 0.69 3.11 -0.391 0.258 -- -1.35 -- -0.0831 4.78 -- -- -- --
219.95 0.695 3.1 -0.383 0.291 -- -- -- -0.0756 6.63 -- -- -- --
221.11 0.693 3.09 -0.448 -- 0.574 -- -- -0.0408 -- 51.72 13 -- --
221.27 0.693 3.1 -- 0.299 0.32 -- -- -0.0678 5.66 46.21 8 -- --
224.38 0.7 3.11 -0.376 -- -- -- -- -0.0698 -- -- -- -- --
223.81 0.7 3.09 -- 0.287 -- -- -- -0.033 6.71 -- -- -- --
219.86 0.691 3.1 -- -- 1.37 -- -- -0.02 -- 60.57 17 -- --
228.1 0.705 3.1 -- -- -- -- -- -0.0281 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 203.61 humidity 90.0 720 > th dose independent rect. 10 3
2 203.77 humidity 90.0 720 > th dose dependent rect. 10 3
3 204.08 precipitation 0.1 270 > th dose independent rect. 8 3
6 204.08 precipitation 0.1 270 > th dose dependent rect. 8 3
13 204.56 humidity 90.0 720 > th dose independent rect. 10 1
27 204.97 humidity 90.0 720 > th dose dependent rect. 10 1
39 205.61 wind 1.0 43200 < th dose independent rect. 20 1
40 205.72 wind 1.0 10 < th dose dependent rect. 11 1
44 205.79 radiation 40.0 14400 < th dose independent rect. 16 9
45 205.80 wind 1.0 90 < th dose independent rect. 11 1
46 205.97 radiation 40.0 14400 < th dose independent rect. 16 11
47 206.06 wind 1.0 10 < th dose independent rect. 11 1
54 206.13 wind 1.0 90 < th dose dependent rect. 10 2
57 206.20 radiation 40.0 14400 < th dose independent rect. 16 6
58 206.20 radiation 40.0 14400 < th dose independent rect. 16 14
60 206.28 wind 1.0 43200 > th dose independent rect. 20 1
63 206.49 precipitation 0.1 720 > th dose independent rect. 6 1
64 206.49 precipitation 0.1 720 > th dose dependent rect. 6 1
66 206.60 radiation 40.0 10 > th dose independent rect. 11 1
69 206.66 humidity 90.0 14400 < th dose dependent rect. 24 7
79 206.85 radiation 40.0 10 > th dose independent rect. 11 4
134 207.22 humidity 90.0 14400 < th dose dependent rect. 24 2
150 207.41 humidity 70.0 10 > th dose independent rect. 12 1
154 207.44 humidity 80.0 14400 > th dose independent rect. 24 1
160 207.49 radiation 30.0 10 > th dose dependent rect. 11 1
169 207.58 humidity 80.0 14400 < th dose dependent rect. 4 1
173 207.62 atmosphere 1000.0 10 < th dose independent rect. 11 4
175 207.64 radiation 40.0 14400 < th dose independent rect. 16 1
181 207.69 humidity 80.0 14400 < th dose independent rect. 24 1
194 207.75 atmosphere 995.0 4320 < th dose dependent rect. 15 3
201 207.77 atmosphere 995.0 4320 < th dose independent rect. 15 2
257 207.78 atmosphere 995.0 4320 < th dose dependent rect. 2 13
313 207.87 radiation 40.0 14400 > th dose independent rect. 15 17
314 207.87 wind 1.0 43200 < th dose dependent rect. 20 1
317 207.89 radiation 40.0 10 > th dose independent sin 17 NA
398 207.98 atmosphere 995.0 4320 > th dose independent rect. 8 9
401 207.99 radiation 40.0 10 > th dose dependent rect. 13 23
434 208.09 atmosphere 995.0 4320 > th dose independent rect. 8 11
438 208.12 radiation 40.0 14400 > th dose independent rect. 15 1
455 208.13 radiation 10.0 4320 < th dose independent rect. 18 7
464 208.15 radiation 40.0 10 < th dose independent sin 18 NA
480 208.21 humidity 80.0 14400 < th dose independent rect. 5 1
484 208.23 humidity 80.0 14400 > th dose independent rect. 24 6
485 208.23 atmosphere 995.0 4320 > th dose independent rect. 19 19
488 208.26 temperature 15.0 43200 > th dose independent rect. 13 1
491 208.27 radiation 1.0 14400 < th dose independent rect. 19 10
494 208.28 temperature 15.0 43200 < th dose independent rect. 13 1
512 208.29 humidity 50.0 14400 > th dose dependent rect. 3 4
514 208.30 radiation 40.0 10 < th dose independent rect. 3 23
543 208.34 radiation 10.0 10 > th dose dependent rect. 11 3
569 208.39 atmosphere 995.0 4320 > th dose independent rect. 14 2
574 208.40 radiation 30.0 14400 > th dose dependent rect. 16 1
593 208.42 radiation 40.0 10 > th dose dependent sin 18 NA
608 208.45 wind 1.0 43200 > th dose independent rect. 18 3
614 208.47 humidity 80.0 14400 > th dose independent rect. 5 1
617 208.48 temperature 15.0 43200 > th dose independent rect. 22 1
620 208.49 temperature 15.0 43200 < th dose independent rect. 22 1
624 208.49 radiation 40.0 14400 > th dose dependent rect. 15 17
630 208.51 temperature 15.0 43200 > th dose independent rect. 17 1
634 208.51 atmosphere 995.0 4320 > th dose independent rect. 22 16
639 208.52 temperature 15.0 43200 > th dose independent rect. 17 6
644 208.53 temperature 15.0 43200 > th dose independent rect. 13 10
653 208.54 temperature 15.0 43200 > th dose independent rect. 10 10
654 208.54 temperature 15.0 43200 > th dose independent rect. 10 13
659 208.55 temperature 15.0 43200 < th dose independent rect. 17 6
668 208.55 radiation 1.0 14400 < th dose dependent rect. 8 5
679 208.56 temperature 15.0 43200 < th dose independent rect. 13 11
702 208.58 temperature 15.0 43200 < th dose independent rect. 10 14
705 208.59 temperature 15.0 43200 < th dose independent rect. 18 1
710 208.59 temperature 15.0 43200 > th dose independent rect. 13 7
729 208.60 temperature 15.0 43200 > th dose independent rect. 10 5
753 208.62 temperature 15.0 43200 > th dose independent sin 20 NA
758 208.62 temperature 15.0 43200 < th dose independent rect. 10 10
808 208.64 radiation 10.0 270 < th dose dependent rect. 8 2
825 208.65 temperature 15.0 43200 < th dose independent sin 19 NA
832 208.65 temperature 15.0 43200 < th dose independent rect. 10 5
901 208.69 atmosphere 1010.0 1440 < th dose independent rect. 13 1
906 208.69 temperature 15.0 43200 < th dose independent rect. 13 7
951 208.72 radiation 1.0 14400 < th dose independent rect. 4 1
986 208.74 temperature 15.0 43200 > th dose independent rect. 10 1
992 208.74 radiation 40.0 14400 < th dose independent rect. 4 4