BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os04g0317400 Os04g0317400|Os04g0317400
(117 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os04g0317400 Pollen allergen Lol p2 family protein 188 6e-49
Os04g0329300 Pollen allergen Lol p2 family protein 187 1e-48
Os04g0317500 Pollen allergen Lol p2 family protein 180 2e-46
Os04g0329200 Pollen allergen Lol p2 family protein 179 3e-46
Os04g0317800 Pollen allergen Lol p2 family protein 179 5e-46
Os06g0655200 Pollen allergen Lol p2 family protein 171 1e-43
Os06g0663300 Pollen allergen Lol p2 family protein 171 1e-43
Os06g0662500 Pollen allergen Lol p2 family protein 170 3e-43
AK105508 170 3e-43
Os06g0662600 Pollen allergen Lol p2 family protein 168 8e-43
Os06g0662800 Pollen allergen Lol p2 family protein 165 8e-42
Os04g0328900 Pollen allergen Lol p2 family protein 164 9e-42
Os06g0662300 Pollen allergen Lol p2 family protein 156 3e-39
Os06g0662700 Pollen allergen Lol p2 family protein 150 3e-37
Os06g0662750 147 1e-36
Os06g0662900 Pollen allergen/expansin, C-terminal domain co... 91 2e-19
Os03g0106900 Beta-expansin precursor (Beta-expansin 1) 76 7e-15
Os03g0106500 Beta-expansin precursor (Beta-expansin 1) 76 7e-15
Os03g0106700 Similar to Beta-expansin 70 4e-13
Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10) 69 9e-13
>Os04g0317400 Pollen allergen Lol p2 family protein
Length = 117
Score = 188 bits (478), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/94 (100%), Positives = 94/94 (100%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF
Sbjct: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0329300 Pollen allergen Lol p2 family protein
Length = 117
Score = 187 bits (476), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/94 (98%), Positives = 94/94 (100%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKVAEGSSASSLELVTN+AISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF
Sbjct: 24 TELTFKVAEGSSASSLELVTNVAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0317500 Pollen allergen Lol p2 family protein
Length = 117
Score = 180 bits (457), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 88/94 (93%), Positives = 92/94 (97%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKVAEGSSA+SLELVTN+AISEVE+KEKGGKDWV LKES SNTWT+KSEAPLKGPF
Sbjct: 24 TELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDWVGLKESGSNTWTLKSEAPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0329200 Pollen allergen Lol p2 family protein
Length = 117
Score = 179 bits (455), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 87/94 (92%), Positives = 92/94 (97%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKVAEGSSA+SLELVTN+AISEVE+KEKGGKDWV LKES SNTWT+KS+APLKGPF
Sbjct: 24 TELTFKVAEGSSATSLELVTNVAISEVEVKEKGGKDWVGLKESGSNTWTLKSDAPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
>Os04g0317800 Pollen allergen Lol p2 family protein
Length = 117
Score = 179 bits (453), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/94 (93%), Positives = 92/94 (97%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKVAEGSSA SLELVTN+AISEVE+KEKGGKDWVALKESSSNTWT+KSE+PLKGPF
Sbjct: 24 TELTFKVAEGSSAKSLELVTNVAISEVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIP SFTAGSEYKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPGSFTAGSEYKSGIQL 117
>Os06g0655200 Pollen allergen Lol p2 family protein
Length = 117
Score = 171 bits (433), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 84/94 (89%), Positives = 88/94 (93%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TELTFKV EGSSA+SLEL+TN+AISEVEIKEKG DW ALKESSSNTWTIKS +PLKGPF
Sbjct: 24 TELTFKVNEGSSATSLELITNVAISEVEIKEKGASDWTALKESSSNTWTIKSGSPLKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGS YKSGIQL
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSVYKSGIQL 117
>Os06g0663300 Pollen allergen Lol p2 family protein
Length = 117
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+TFKV EGSS SLELVTN+AISEVEIKEKGGKDWVALKESS+NTW++KSEA LKGPF
Sbjct: 24 TEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGI +
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGINV 117
>Os06g0662500 Pollen allergen Lol p2 family protein
Length = 117
Score = 170 bits (430), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+TFKV EGSS SLELVTN+AISEVEIKEKGGKDWVALKESS+NTW++KSEA LKGPF
Sbjct: 24 TEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGI +
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGINV 117
>AK105508
Length = 145
Score = 170 bits (430), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 83/94 (88%), Positives = 89/94 (94%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+TFKV EGSS SLELVTNIAISEVEIKEKGGKDWVALKESS+NTW++KSEA LKGPF
Sbjct: 52 TEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKSEATLKGPF 111
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAG+EYKSGI +
Sbjct: 112 SVRFLVKNGGYRVVDDVIPESFTAGTEYKSGINI 145
>Os06g0662600 Pollen allergen Lol p2 family protein
Length = 117
Score = 168 bits (426), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 82/94 (87%), Positives = 88/94 (93%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+ FKV EGSS SLELVTN+AISEVEIKEKGGKDWVALKESS+NTW++KSEA LKGPF
Sbjct: 24 TEVAFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGI +
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGINI 117
>Os06g0662800 Pollen allergen Lol p2 family protein
Length = 228
Score = 165 bits (417), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 81/90 (90%), Positives = 86/90 (95%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+TFKV EGSS SLELVTN+AISEVEIKEKGGKDWVALKESS+NTW++KSEA LKGPF
Sbjct: 24 TEVTFKVGEGSSGKSLELVTNVAISEVEIKEKGGKDWVALKESSTNTWSLKSEAALKGPF 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKS 113
SVRFLVKNGGYRVVDDVIPESFTAGSEYKS
Sbjct: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKS 113
Score = 162 bits (409), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 78/93 (83%), Positives = 85/93 (91%)
Query: 25 ELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFS 84
E+TFKV E SS SLELVTN+AIS+VEIKEKG KDWV LKESS+NTWTIKSEAPLKGPFS
Sbjct: 136 EVTFKVGEASSGKSLELVTNVAISKVEIKEKGSKDWVTLKESSTNTWTIKSEAPLKGPFS 195
Query: 85 VRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
+RFL KNGGYRVVDDVIPESFTAGS+YKSGI +
Sbjct: 196 IRFLAKNGGYRVVDDVIPESFTAGSKYKSGINI 228
>Os04g0328900 Pollen allergen Lol p2 family protein
Length = 99
Score = 164 bits (416), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 79/90 (87%), Positives = 87/90 (96%)
Query: 28 FKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFSVRF 87
+VA+GSSA SLELVTN+AIS+VE+KEKGGKDWVALKESSSNTWT+KSE+PLKGPFSVRF
Sbjct: 10 HEVAKGSSAKSLELVTNVAISKVEVKEKGGKDWVALKESSSNTWTLKSESPLKGPFSVRF 69
Query: 88 LVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
LVKN GYRVVDD+IPESFTAGSEYKSGIQL
Sbjct: 70 LVKNSGYRVVDDIIPESFTAGSEYKSGIQL 99
>Os06g0662300 Pollen allergen Lol p2 family protein
Length = 118
Score = 156 bits (395), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 73/94 (77%), Positives = 84/94 (89%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TE+TFK+ E S+ S+LEL+TN+AISEVEIKEKGG DW LKESS+NTW IKS+APLKGP
Sbjct: 24 TEVTFKIGESSTTSTLELITNVAISEVEIKEKGGSDWRGLKESSANTWKIKSDAPLKGPL 83
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNGGYR+VDDVIPE+F AGS YKSGIQ+
Sbjct: 84 SVRFLVKNGGYRIVDDVIPETFKAGSVYKSGIQV 117
>Os06g0662700 Pollen allergen Lol p2 family protein
Length = 105
Score = 150 bits (378), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 74/94 (78%), Positives = 83/94 (88%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPF 83
TEL FKV EGSS +SLELVTN+ ISEVE+KEKGGK WV LKESS+NTWT+KSEA LKG F
Sbjct: 12 TELAFKVGEGSSDTSLELVTNVTISEVEVKEKGGKYWVGLKESSTNTWTLKSEALLKGSF 71
Query: 84 SVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
SVRFLVKNG Y V+D+VIPESFTAG+EYK+GI L
Sbjct: 72 SVRFLVKNGSYHVIDNVIPESFTAGTEYKNGINL 105
>Os06g0662750
Length = 84
Score = 147 bits (371), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 71/80 (88%), Positives = 77/80 (96%)
Query: 38 SLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFSVRFLVKNGGYRVV 97
SLELVTN+AISEVEI+EKGGKDWVALKESS+NT TIKSEAPLKGPFSVRFLVKNGGYRVV
Sbjct: 5 SLELVTNVAISEVEIREKGGKDWVALKESSTNTCTIKSEAPLKGPFSVRFLVKNGGYRVV 64
Query: 98 DDVIPESFTAGSEYKSGIQL 117
D+VIPESF AGS+YKSGI +
Sbjct: 65 DNVIPESFMAGSKYKSGINI 84
>Os06g0662900 Pollen allergen/expansin, C-terminal domain containing protein
Length = 140
Score = 90.5 bits (223), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/52 (84%), Positives = 49/52 (94%)
Query: 24 TELTFKVAEGSSASSLELVTNIAISEVEIKEKGGKDWVALKESSSNTWTIKS 75
TE+TFKV EGSS SLELVTNIAISEVEIKEKGGKDWVALKESS+NTW++K+
Sbjct: 24 TEVTFKVGEGSSGKSLELVTNIAISEVEIKEKGGKDWVALKESSTNTWSLKT 75
>Os03g0106900 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 24 TELTFKVAEGSSASSLELVTNIA-----ISEVEIKEKGGKDWVALKESSSNTWTIKSEAP 78
T++TF + + S+ + L L+ + EVEIKEKG ++W ALKES W I + P
Sbjct: 168 TKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKP 227
Query: 79 LKGPFSVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQ 116
LKGPFSVR + G + +D IP+ + A S YKS +Q
Sbjct: 228 LKGPFSVRVTTEGGEKIIAEDAIPDGWKADSVYKSNVQ 265
>Os03g0106500 Beta-expansin precursor (Beta-expansin 1)
Length = 267
Score = 75.9 bits (185), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 24 TELTFKVAEGSSASSLELVTNIA-----ISEVEIKEKGGKDWVALKESSSNTWTIKSEAP 78
T++TF + + S+ + L L+ + EVEIKEKG ++W ALKES W I + P
Sbjct: 168 TKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKP 227
Query: 79 LKGPFSVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQ 116
LKGPFSVR + G + +D IP+ + A S YKS +Q
Sbjct: 228 LKGPFSVRVTTEGGEKIIAEDAIPDGWKADSVYKSNVQ 265
>Os03g0106700 Similar to Beta-expansin
Length = 228
Score = 70.1 bits (170), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 40 ELVTNIA----ISEVEIKEKGGKDWVALKESSSNTWTIKSEAPLKGPFSVRFLVKNGGYR 95
EL+ +A + EVEIKEKG ++W ALKES W I + PLKGPFSVR + G
Sbjct: 146 ELLKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEKI 205
Query: 96 VVDDVIPESFTAGSEYKSGIQ 116
+ +D IP+ + A S YKS +Q
Sbjct: 206 IAEDAIPDGWKADSVYKSNVQ 226
>Os03g0106800 Beta-expansin precursor (Beta-expansin OsEXPB10)
Length = 267
Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 24 TELTFKVAEGSSASSLELVTNIA-----ISEVEIKEKGGKDWVALKESSSNTWTIKSEAP 78
T++TF V +GS+ + ++ + +VE+KEKG ++W L ES W I + P
Sbjct: 168 TKVTFHVEKGSNPNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKP 227
Query: 79 LKGPFSVRFLVKNGGYRVVDDVIPESFTAGSEYKSGIQL 117
LKGPFS+R ++ V +DVIP+++ A + YKS IQ+
Sbjct: 228 LKGPFSLRVTTESDQKLVANDVIPDNWKANALYKSEIQV 266
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.309 0.127 0.350
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,028,460
Number of extensions: 107979
Number of successful extensions: 269
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 271
Number of HSP's successfully gapped: 21
Length of query: 117
Length of database: 17,035,801
Length adjustment: 84
Effective length of query: 33
Effective length of database: 12,649,825
Effective search space: 417444225
Effective search space used: 417444225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 149 (62.0 bits)