BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0781700 Os03g0781700|AK103023
(247 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0781700 Reticulon family protein 505 e-143
Os07g0142000 Reticulon family protein 370 e-103
Os05g0526400 Reticulon family protein 218 4e-57
Os01g0736900 Reticulon family protein 214 6e-56
Os02g0265900 Reticulon family protein 190 1e-48
Os06g0503400 Reticulon family protein 186 9e-48
Os05g0550100 183 9e-47
Os01g0226300 Reticulon family protein 170 7e-43
Os05g0312500 Reticulon family protein 163 1e-40
Os01g0139000 Reticulon family protein 157 6e-39
Os03g0336600 Reticulon family protein 117 9e-27
Os01g0691400 Reticulon family protein 112 2e-25
Os01g0851300 Reticulon family protein 104 6e-23
Os04g0670000 Reticulon family protein 97 9e-21
Os04g0367400 Reticulon family protein 72 3e-13
>Os03g0781700 Reticulon family protein
Length = 247
Score = 505 bits (1300), Expect = e-143, Method: Compositional matrix adjust.
Identities = 247/247 (100%), Positives = 247/247 (100%)
Query: 1 MLEHSESATEKIMSSIMDTIAENLPKQKSGKFDVGAASDKMKEKLFGRQKTIHRVLGGGK 60
MLEHSESATEKIMSSIMDTIAENLPKQKSGKFDVGAASDKMKEKLFGRQKTIHRVLGGGK
Sbjct: 1 MLEHSESATEKIMSSIMDTIAENLPKQKSGKFDVGAASDKMKEKLFGRQKTIHRVLGGGK 60
Query: 61 PADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALS 120
PADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALS
Sbjct: 61 PADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALS 120
Query: 121 GSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIG 180
GSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIG
Sbjct: 121 GSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIG 180
Query: 181 GWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGN 240
GWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGN
Sbjct: 181 GWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGN 240
Query: 241 MKFKKSE 247
MKFKKSE
Sbjct: 241 MKFKKSE 247
>Os07g0142000 Reticulon family protein
Length = 246
Score = 370 bits (950), Expect = e-103, Method: Compositional matrix adjust.
Identities = 177/247 (71%), Positives = 209/247 (84%), Gaps = 1/247 (0%)
Query: 1 MLEHSESATEKIMSSIMDTIAENLPKQKSGKFDVGAASDKMKEKLFGRQKTIHRVLGGGK 60
M EHSE+A I+ SI+D IA+NLPKQKS +F+ G+ SD+ K +LFG QK++H VLGGGK
Sbjct: 1 MPEHSENAAANIVDSIVDAIADNLPKQKSVRFEDGSISDQAK-RLFGGQKSVHHVLGGGK 59
Query: 61 PADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALS 120
ADVLLWRNKKISSSVLA+ATA+WVFFEWLDYHFLTI F LVLGMVVQF WS F+ L+
Sbjct: 60 SADVLLWRNKKISSSVLAVATAVWVFFEWLDYHFLTIACFVLVLGMVVQFAWSTFAGMLN 119
Query: 121 GSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIG 180
GSPSKVPRVELP+ELF NI A+GTQVNKFL LQDVSC R+LK+F+L I G +AAA+IG
Sbjct: 120 GSPSKVPRVELPDELFANIGSAIGTQVNKFLGTLQDVSCGRDLKNFLLVIAGFFAAAIIG 179
Query: 181 GWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGN 240
WCN LTVIYIGFV AHTLPVLYEK +++VD+FLYN LGLL++QYQKLD+GVL K+PKG
Sbjct: 180 SWCNLLTVIYIGFVCAHTLPVLYEKNQEKVDEFLYNTLGLLQNQYQKLDKGVLGKVPKGI 239
Query: 241 MKFKKSE 247
+K KKS+
Sbjct: 240 IKLKKSD 246
>Os05g0526400 Reticulon family protein
Length = 251
Score = 218 bits (555), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/252 (44%), Positives = 163/252 (64%), Gaps = 9/252 (3%)
Query: 1 MLEHSESATEKIMSSIMDTIAENLPKQKSGKFDVG------AASDKMK-EKLFGRQKTIH 53
M EH E E ++ S+MD I++ L + A K K +LFGR+K +H
Sbjct: 1 MAEHKEE--ESLVESVMDKISDKLHGRGGSSSSSSDSDGERTADLKAKIYRLFGREKPVH 58
Query: 54 RVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWS 113
VLGGGKPAD+ LWRNKKIS VLA ATAIW+ FE +DYH LT++ ++L + + F+WS
Sbjct: 59 SVLGGGKPADLFLWRNKKISVGVLAGATAIWLLFEVMDYHLLTLLCHCIILTLAMLFLWS 118
Query: 114 NFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGL 173
N S+ ++ SP +P V++PE+L VN+A ++ ++N+ + L+++ +LK F++ +VGL
Sbjct: 119 NASTFINKSPPNIPEVKIPEDLAVNVARSLRFEINRGFATLREIGQGHDLKKFLIVVVGL 178
Query: 174 WAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVL 233
W +V+G CNFLT+ YI F+ +T+PVLYEKYEDQ+D F + L+ Y D+ L
Sbjct: 179 WVLSVLGSCCNFLTLFYIVFMVLYTVPVLYEKYEDQIDAFGEKAMIELKKYYAIFDEKCL 238
Query: 234 SKIPKGNMKFKK 245
SKIPKG +K KK
Sbjct: 239 SKIPKGPLKNKK 250
>Os01g0736900 Reticulon family protein
Length = 253
Score = 214 bits (544), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 144/202 (71%)
Query: 44 KLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALV 103
+LFGR++ +H VLGGGKPAD++LWRNKKIS VLA ATAIW+ FE ++YH LT+V L+
Sbjct: 51 RLFGRERPVHSVLGGGKPADLVLWRNKKISGGVLAGATAIWLLFEIMEYHLLTLVCHCLI 110
Query: 104 LGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNL 163
L + V F+WSN S+ + SP +P V++PE+L VNIA+++ ++N+ + L+++ R+L
Sbjct: 111 LSLAVLFLWSNASTFIHKSPPNIPEVKIPEDLTVNIALSLRYEINRGFATLREIGHGRDL 170
Query: 164 KHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRD 223
K F++ I GLW +V+G CNFLT+ YI FV+ +T+PVLYEKYED+VD F +
Sbjct: 171 KKFLIVIAGLWILSVLGSSCNFLTLFYIVFVALYTVPVLYEKYEDKVDAFGEKAEIEFKK 230
Query: 224 QYQKLDQGVLSKIPKGNMKFKK 245
Y ++ LSKIPKG +K KK
Sbjct: 231 YYALFEEKCLSKIPKGPLKDKK 252
>Os02g0265900 Reticulon family protein
Length = 230
Score = 190 bits (482), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 137/210 (65%)
Query: 36 AASDKMKEKLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFL 95
AA+ +L G K++H+ LGGGK ADVLLW++KKIS++V+ AT +WV FE +DYHFL
Sbjct: 19 AAARPRGFRLLGGDKSVHQALGGGKAADVLLWKDKKISAAVIGGATVLWVLFEVVDYHFL 78
Query: 96 TIVSFALVLGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQ 155
T++S L+ + + F+WS + + SP +P V++ E+L VN+A+A+ T +N+ L L+
Sbjct: 79 TLISHVLIGVLAILFLWSKATIFIKKSPPNIPEVKISEDLAVNVALALRTDINQALHLLR 138
Query: 156 DVSCERNLKHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLY 215
++S +L F+ IV LW + IG C+FLT+ Y+ + HT+P+LY KY+D+VD F
Sbjct: 139 EISLGHDLMKFLGVIVALWILSEIGSLCDFLTLFYVAVLMLHTVPILYHKYQDKVDHFAG 198
Query: 216 NILGLLRDQYQKLDQGVLSKIPKGNMKFKK 245
L QY LD VLSKIP+G K KK
Sbjct: 199 KAHVELSRQYSVLDAKVLSKIPRGPAKDKK 228
>Os06g0503400 Reticulon family protein
Length = 265
Score = 186 bits (473), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 134/203 (66%)
Query: 44 KLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALV 103
+L G ++H+ LGGGK ADVLLW++KK S+ V+ AT IW+ FE LDYH LT++S ++
Sbjct: 63 RLLGEDTSVHKALGGGKTADVLLWKDKKTSAVVIGGATVIWILFEVLDYHLLTLLSHVMI 122
Query: 104 LGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNL 163
+ + F+WS ++ + SP +P V++PE++ VN++ A+ + +N+ L ++++ +L
Sbjct: 123 GALAILFLWSKATTFIKKSPPDIPVVQIPEDVAVNVSRALRSDINRALHLFREIALGHDL 182
Query: 164 KHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRD 223
K F+ IV LW + +G C+FLT+IY+ + HT+P+LY+KY+D+VD F
Sbjct: 183 KKFLGVIVALWVLSEVGSCCDFLTLIYVAVLMLHTVPILYDKYQDKVDHFAGRAHSEACK 242
Query: 224 QYQKLDQGVLSKIPKGNMKFKKS 246
Y+ LD VLSKIP+G +K KK+
Sbjct: 243 HYEVLDAKVLSKIPRGPVKPKKN 265
>Os05g0550100
Length = 788
Score = 183 bits (465), Expect = 9e-47, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 141/224 (62%), Gaps = 5/224 (2%)
Query: 23 NLPKQKSGKFDVGAASDKMKEKLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATA 82
N+P S D D+ +LF RQK +H++LGG K AD++LWR++ +S+ +LA AT
Sbjct: 2 NVPHVSSDSDD-----DRPVIRLFHRQKPVHKILGGRKVADIMLWRDRNLSAGILAGATL 56
Query: 83 IWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVA 142
IW F+ +Y+ +T++ +LGM+V F+WSN + +P ++P V + E F +A+
Sbjct: 57 IWFLFDVAEYNLVTLLCHIALLGMLVLFIWSNAAPLFDRAPPRIPEVIVSEHAFRELALT 116
Query: 143 VGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVL 202
+ ++V F + L D+SC + L+ F+ I LW AVIG C+F T++Y+GF+ A TLP L
Sbjct: 117 LHSKVAHFSAVLYDISCGKELRKFLAVIGSLWILAVIGETCSFTTLLYVGFLCALTLPAL 176
Query: 203 YEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGNMKFKKS 246
YE+YE +VD + L+ Y+K+D VL+KIP+G +K K+S
Sbjct: 177 YERYETEVDHLVAKGGQDLKKFYKKIDSNVLNKIPRGPVKTKES 220
>Os01g0226300 Reticulon family protein
Length = 178
Score = 170 bits (431), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 120/177 (67%)
Query: 69 NKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALSGSPSKVPR 128
N+ IS+ VL ATAIW+ FE L YH LT V L+ + + F+WSN SS ++ SP ++P
Sbjct: 1 NRNISAGVLGGATAIWILFELLGYHLLTFVCHGLIFSLGLLFLWSNASSFINKSPPRIPE 60
Query: 129 VELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIGGWCNFLTV 188
V +PE+L VNIA++ ++N+ + L+ ++ R++K F++ I GLW +V+G CNFLT+
Sbjct: 61 VIIPEDLVVNIALSTRYEINRAFANLRQIALGRDIKKFLIVIAGLWLLSVLGSCCNFLTL 120
Query: 189 IYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGNMKFKK 245
+YI FV HT+P+LYEKYEDQ+D + ++ QY LD VLSK+P+G +K KK
Sbjct: 121 VYIVFVVLHTVPILYEKYEDQIDSYGEKGWVEIKKQYAVLDAKVLSKVPRGPLKDKK 177
>Os05g0312500 Reticulon family protein
Length = 251
Score = 163 bits (412), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 123/194 (63%)
Query: 44 KLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALV 103
+LFGR +H VLGGGK AD++LWR+K+ S S+LA T IW+ FE + YH LT +L+
Sbjct: 50 RLFGRTNPLHHVLGGGKAADLVLWRDKQTSGSILAGVTVIWLLFEGIGYHLLTFFCHSLM 109
Query: 104 LGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNL 163
+ + V FVW+N +S ++ P K P L E + IA + ++N+ L+ V+ ++L
Sbjct: 110 VFLTVCFVWANAASFINRGPPKFPDAILSEVQCLKIAHILRKEINEAFLTLRHVASGKDL 169
Query: 164 KHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRD 223
K +++ + GLW ++IG +FLT+ Y F+ A+TLP+LYEKYED+VD L L+
Sbjct: 170 KTYLMTVAGLWFVSIIGSCFSFLTLSYTIFLMAYTLPMLYEKYEDEVDVVGEKALIELKK 229
Query: 224 QYQKLDQGVLSKIP 237
QY LD +LSKIP
Sbjct: 230 QYAVLDHKLLSKIP 243
>Os01g0139000 Reticulon family protein
Length = 213
Score = 157 bits (398), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 123/197 (62%)
Query: 44 KLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALV 103
KLFGR++ +H LGG K AD++LWR +++S+S++A AT W FE +YHFL++ + +
Sbjct: 12 KLFGRERPLHDALGGHKAADIILWRERRVSASIVAGATVAWYLFEVAEYHFLSLACYLAM 71
Query: 104 LGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNL 163
LGM+V F+W+N S+ + ++P + + E + +A+ +++ F+ L D++C +++
Sbjct: 72 LGMLVVFIWANASAFFNLPAPRIPEIFVSERTTRQVILALHSRLTWFVHRLYDIACGKDI 131
Query: 164 KHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRD 223
K F+L + L+ A+VI + LT++Y+ + TLPV+YE YE +VD + + LR
Sbjct: 132 KMFILTVFSLFIASVIASCFSSLTLLYLVVLGTMTLPVMYENYESEVDHLVSTAVHDLRS 191
Query: 224 QYQKLDQGVLSKIPKGN 240
+D GV KIP+G
Sbjct: 192 HVGDIDSGVFKKIPRGR 208
>Os03g0336600 Reticulon family protein
Length = 231
Score = 117 bits (293), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 113/195 (57%)
Query: 51 TIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQF 110
++HR+ GGGK AD++LW+ +++ V+ AT W FE FLT+ S L++ +VVQF
Sbjct: 36 SVHRIAGGGKAADIILWKRGRVTIGVIFGATMAWWLFEKSGLSFLTVCSDVLLILIVVQF 95
Query: 111 VWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAI 170
+ + L+ P +P + L EE+ N A + +VN L D++ ++ + F +
Sbjct: 96 IRIKVAGLLNKQPRPLPELVLSEEMVSNAAASFRVKVNNMLMIAHDITLGKDFRLFFQVV 155
Query: 171 VGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFLYNILGLLRDQYQKLDQ 230
+ LW +VIG +C+ +T+ Y G ++ T+P LY K ++QVD + + + Y+ +D+
Sbjct: 156 LLLWLLSVIGNFCSSITLAYFGTIALVTIPALYSKNQEQVDRYAGMVHRNISRHYKIVDE 215
Query: 231 GVLSKIPKGNMKFKK 245
V+S++P+ ++ K+
Sbjct: 216 NVMSRLPRSFIRDKE 230
>Os01g0691400 Reticulon family protein
Length = 202
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 41/225 (18%)
Query: 32 FDVGAASDKMKEKLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLD 91
F + SD+ F K+IH++LGGG+ ++
Sbjct: 5 FPRDSDSDQNVRMPFHGHKSIHKLLGGGQ-----------------------------VE 35
Query: 92 YHFLTIVSFALVLGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFL 151
Y+ + ++ +L M+V F+WSN + L +P ++P + + E F +A+ V ++ +
Sbjct: 36 YNIIPLLCQIAILAMLVIFIWSNAAPLLDRAPPRIPEIIISEHAFREMALTVHYKLTYTV 95
Query: 152 SFLQDVSCERNLKHFVL-----------AIVG-LWAAAVIGGWCNFLTVIYIGFVSAHTL 199
S L D++C ++LK F+L +VG L + IG C+ +++YIGF+ AHTL
Sbjct: 96 SVLYDIACGKDLKRFLLFWTNNQIVYDIKVVGSLLVLSAIGSSCSLTSLLYIGFLCAHTL 155
Query: 200 PVLYEKYEDQVDDFLYNILGLLRDQYQKLDQGVLSKIPKGNMKFK 244
PVLY++Y+ +VD + ++ Y+K+D +L+KIP+G +K K
Sbjct: 156 PVLYQRYKTEVDHLVAKGSDDIKKFYKKVDSNLLNKIPRGPVKTK 200
>Os01g0851300 Reticulon family protein
Length = 203
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 102/179 (56%), Gaps = 2/179 (1%)
Query: 37 ASDKMKEKLFGRQKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLD-YHFL 95
ASD+ +L G Q+++H +LGGG ADV+LWR K+++ LA A WV F L Y L
Sbjct: 3 ASDQ-GCRLLGAQRSLHGLLGGGAMADVVLWRRKEVAGWSLAAVAASWVLFYCLPGYTLL 61
Query: 96 TIVSFALVLGMVVQFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQ 155
+ VS L++ +VV FVW+ + L+ P VP +++ E+ A AVG ++K L +
Sbjct: 62 SFVSSVLMIVLVVLFVWAKAARLLNRPPPPVPLIKISEDSMSKAAAAVGNILHKALQGFE 121
Query: 156 DVSCERNLKHFVLAIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFL 214
+++ ++ F + L +++G + +T++Y V A T+P L +KYE+ + FL
Sbjct: 122 NIAHGKDSSLFYKMVSVLLLISIVGRVTDLITLVYACLVLALTIPALVDKYEENIAKFL 180
>Os04g0670000 Reticulon family protein
Length = 199
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 103/164 (62%)
Query: 49 QKTIHRVLGGGKPADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVV 108
++++H +LGGG AD++LWR + +S++ +A ATA+W FE Y F ++++ AL+L + +
Sbjct: 6 RRSLHALLGGGAVADLVLWRRRNVSAAAVAGATAVWFLFERAGYSFPSVMANALLLLVAI 65
Query: 109 QFVWSNFSSALSGSPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVL 168
F W+ +S L+ +P++E+ + + A +NK L+ D++ +R+ F+
Sbjct: 66 LFFWAKSASLLNRPLPPLPKLEVSDVVVEKAADRALVWINKVLAVGHDIAIKRDRSVFIK 125
Query: 169 AIVGLWAAAVIGGWCNFLTVIYIGFVSAHTLPVLYEKYEDQVDD 212
I+ LW + IG NFLT+IYIG + + +P LYEKY+DQVD+
Sbjct: 126 VILILWVVSYIGMLFNFLTLIYIGVMFSLLVPPLYEKYQDQVDE 169
>Os04g0367400 Reticulon family protein
Length = 213
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 82/153 (53%)
Query: 62 ADVLLWRNKKISSSVLALATAIWVFFEWLDYHFLTIVSFALVLGMVVQFVWSNFSSALSG 121
DV++WR +S+ +LA + W+ F Y FL++ S L+L + V F+W+ + L+
Sbjct: 25 GDVVMWRRGDVSACLLAATVSGWLLFGSGGYTFLSLASNVLLLLLTVLFLWAKAARLLNR 84
Query: 122 SPSKVPRVELPEELFVNIAVAVGTQVNKFLSFLQDVSCERNLKHFVLAIVGLWAAAVIGG 181
+P + + +++ +A + + +N S D++ ++ F + LW ++IG
Sbjct: 85 PEPPIPEMRISQQVVNEVAALLHSGMNTVFSVFHDIALGKDSVLFYQVFLSLWIISIIGS 144
Query: 182 WCNFLTVIYIGFVSAHTLPVLYEKYEDQVDDFL 214
+F T+ Y V+ T+P LY+KYE+ +D ++
Sbjct: 145 LTDFTTLCYTSIVAVLTIPALYQKYEECIDRYM 177
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 8,022,371
Number of extensions: 325068
Number of successful extensions: 849
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 842
Number of HSP's successfully gapped: 15
Length of query: 247
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 149
Effective length of database: 11,918,829
Effective search space: 1775905521
Effective search space used: 1775905521
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 155 (64.3 bits)