BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0219300 Os03g0219300|AK071837
(449 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubu... 858 0.0
Os07g0574800 Tubulin alpha-1 chain 803 0.0
Os11g0247300 Alfa-tubulin 776 0.0
Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubu... 772 0.0
AK106047 760 0.0
AK067478 713 0.0
AK105538 649 0.0
AK109162 358 6e-99
Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin) 353 1e-97
Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin) 353 2e-97
Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin) 353 2e-97
Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin) 352 2e-97
Os05g0413200 Beta-tubulin 352 2e-97
AK110204 347 1e-95
Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta su... 347 1e-95
Os06g0671900 Similar to Beta-tubulin 335 4e-92
AK110638 320 1e-87
Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubu... 228 6e-60
Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin) 129 7e-30
>Os03g0219300 Similar to Tubulin alpha-2 chain (Alpha-2 tubulin)
Length = 449
Score = 858 bits (2216), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/430 (96%), Positives = 413/430 (96%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD
Sbjct: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
RLRKLADNCTGLQGFLVFNAV VDYGRKSKLGFTIYPSPQISTA
Sbjct: 121 RLRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFTIYPSPQISTA 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT
Sbjct: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS
Sbjct: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>Os07g0574800 Tubulin alpha-1 chain
Length = 450
Score = 803 bits (2075), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/430 (87%), Positives = 401/430 (93%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREIISIHIGQAGIQVGN+CWELYCLEHGI+PDG MPSDTT G+A DAFNTFFSET +GK
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCLEHGIEPDGTMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYTVG+E+VDLCLD
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGSYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
R+RKLADNCTGLQGFLVFNAV VDYG+KSKLGFTIYPSPQ+STA
Sbjct: 121 RVRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRLISQ+ISSLTT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTT 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGAINVD+TEFQTNLVPYPRIHFMLSSYAP+IS EKA+HEQ SVPEITN+VFEP+S
Sbjct: 241 SLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSS 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RTVQFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ VPGGDLAKV+RAVCMISNNTAVAEVFSRID KFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>Os11g0247300 Alfa-tubulin
Length = 451
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/430 (84%), Positives = 391/430 (90%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MP D T G DAFNTFFSET +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLIS KEDAANNFARGHYT+G+E+VDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGDYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
R+RKLADNCTGLQGFLVFNAV VDYG+KSKLGFT+YPSPQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGA+NVD+ EFQTNLVPYPRIHFMLSSYAP+IS EKA+HEQ SV EITNS FEP+S
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ VPGGDLAKV+RAVCMISN+T+V EVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>Os03g0726100 Similar to Tubulin alpha-1 chain (Alpha-1 tubulin)
Length = 451
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 360/430 (83%), Positives = 390/430 (90%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQ DG MPSD T G DAFNTFFSET +GK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQADGQMPSDRTVGGGDDAFNTFFSETGAGK 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA+FVDLEPTVIDEV+TG YRQLFHPEQLI+ KEDAANNFARGHYT+G+E+VDLCLD
Sbjct: 61 HVPRAVFVDLEPTVIDEVRTGCYRQLFHPEQLINGKEDAANNFARGHYTIGKEIVDLCLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
R+RKLADNCTGLQGFLVFNAV VDYG+KSKLGFT+YPSPQ+ST+
Sbjct: 121 RIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTS 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSL+EHTDV VLLDNEAIYDIC+RSLDIERPTYTNLNRL+SQVISSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGA+NVD+ EFQTNLVPYPRIHFMLSSYAP+IS EKA+HEQ SV EITNS FEP+S
Sbjct: 241 SLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSS 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+MAKCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ VP GDLAKV+RAVCMISN+T+V EVFSRID KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 SVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>AK106047
Length = 451
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/430 (79%), Positives = 392/430 (91%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MRE++SIHIGQAG+QVGN+CWEL+CLEHGIQPDG MPSD T G+ DAFNTFFSET +GK
Sbjct: 1 MREVLSIHIGQAGVQVGNACWELFCLEHGIQPDGAMPSDKTIGVEDDAFNTFFSETGAGK 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA+F+DLEPTV+DEV+TG YRQLFHPEQLIS KEDAANN+ARGHYT+G+E+VDLCLD
Sbjct: 61 HVPRAVFLDLEPTVVDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIVDLCLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
R+RKLADNCTGLQGF +++AV VDYG+KSKLG+T+YPSPQ+STA
Sbjct: 121 RIRKLADNCTGLQGFCIYHAVGGGTGSGLGALLLERLSVDYGKKSKLGYTVYPSPQVSTA 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNSVLSTHSL+EHTDV +LDNEA+YD+C+R+LDIERPTYTNLNRL+ QV+SSLT
Sbjct: 181 VVEPYNSVLSTHSLLEHTDVAAMLDNEAMYDLCRRNLDIERPTYTNLNRLVGQVVSSLTA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGA+NVDITEFQTNLVPYPRIHF+L+S+AP+IS EKA+HEQ SV EITN+ FEPAS
Sbjct: 241 SLRFDGALNVDITEFQTNLVPYPRIHFVLTSFAPVISAEKAYHEQLSVAEITNAAFEPAS 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
++ KCDPRHGKYMACCLMYRGDVVPKDVNAAV +IKT+RT+QFVDWCPTGFKCGINYQPP
Sbjct: 301 MLTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
T VPGGDLAKV+RAVCMI+N+TA+AEVF+RID KFDLMY+KRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMIANSTAIAEVFARIDHKFDLMYSKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>AK067478
Length = 453
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/430 (74%), Positives = 378/430 (87%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MRE ISIH+GQAG+Q+GNSCWELYCLEH I PDG MPSDTT G + D+FNTFFSET +G+
Sbjct: 1 MRECISIHVGQAGVQMGNSCWELYCLEHNITPDGTMPSDTTLGSSDDSFNTFFSETGAGR 60
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA++VDLEPTV+DEV+TG YRQLFHPEQLI+ KEDAANN+ARGHYT+G+E+VDL LD
Sbjct: 61 HVPRAVYVDLEPTVVDEVRTGVYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 120
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
R+R+L+D CTGLQGFL+F++ VDYG+KSKL F IYP+PQ+STA
Sbjct: 121 RIRRLSDQCTGLQGFLIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTA 180
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYNS+L+TH+ +EH+D ++DNEAIYDIC+R+LDIERPTYTNLNRLI Q++SS+T
Sbjct: 181 VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA 240
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS EKA+HEQ +V EITNS FEP++
Sbjct: 241 SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLTVSEITNSCFEPSN 300
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
M KCDPRHGKYMACCL+YRGDVVPKDVNAA+ +IKT+R++QFVDWCPTGFK GINYQPP
Sbjct: 301 QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP 360
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
T VPGGDLAKV+RAVCM+SN TA+AE ++R+D KFDLMYAKRAFVHWYVGEGMEEGEFSE
Sbjct: 361 TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 421 AREDLAALEK 430
>AK105538
Length = 449
Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 291/430 (67%), Positives = 355/430 (82%), Gaps = 2/430 (0%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MRE+ISIH+GQAG+Q+G SCW+LYCLEHGIQPDG MPSD PG ++F TFFSET +G+
Sbjct: 1 MREVISIHVGQAGVQMGQSCWQLYCLEHGIQPDGTMPSDKQPG--DESFTTFFSETGTGQ 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
+VPR++ VDLEPTV+DE++TG YRQLFHP LIS KEDAANN+ARGHYTVG+E VD +D
Sbjct: 59 YVPRSVMVDLEPTVVDEIRTGTYRQLFHPAGLISGKEDAANNYARGHYTVGKENVDTVVD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
RL K+A+N +GLQGFL FN++ VDYG+K KL F +YP+P+++TA
Sbjct: 119 RLGKIAENSSGLQGFLFFNSIGGGTGSGFTSLLMERLSVDYGKKMKLQFAVYPAPEVATA 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+VL++H+ +EH+D ++DNEAIY +C++ LD+ RP+Y NLNRL+SQ +SS+T
Sbjct: 179 VVEPYNAVLTSHTTMEHSDCAFMVDNEAIYALCQKKLDVPRPSYLNLNRLVSQAVSSITA 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
SLRFDGA+NVD+ EFQTNLVPYPRIHF L +YAPIIS EKA HE +V E+TNS FE +
Sbjct: 239 SLRFDGALNVDLNEFQTNLVPYPRIHFPLVTYAPIISAEKAHHENLTVGELTNSCFEATN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
M KCDPR GKYMACCL++RGDVVPKDVN A+ IK +R++QFVDWCPTGFK GINYQPP
Sbjct: 299 QMVKCDPRMGKYMACCLLFRGDVVPKDVNNAIAVIKNKRSIQFVDWCPTGFKVGINYQPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
T VP GDLAKV RAVCM+SN TA+AE ++R++ KFDLMYAKRAFVHWYVGEGMEEGEF+E
Sbjct: 359 TVVPNGDLAKVNRAVCMLSNTTAIAEAWARVNHKFDLMYAKRAFVHWYVGEGMEEGEFTE 418
Query: 421 AREDLAALEK 430
AREDLAALEK
Sbjct: 419 AREDLAALEK 428
>AK109162
Length = 444
Score = 358 bits (918), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 167/428 (39%), Positives = 259/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ EHGI P G D+ + R N +F+E + GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLER--INVYFNEATGGK 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
+VPRA+ VDLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E+VD LD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A++C LQGF + +++ +Y + F++ PSP++S
Sbjct: 119 VVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+TD +DNEA+YDIC R+L + PTY +LN L+S +S +TT
Sbjct: 179 VVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTT 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + N+VP+PR+HF + +AP+ S + +VPE+T +F+ +
Sbjct: 239 CLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+MA CDPRHG+Y+ ++RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
++ + I N+TA+ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RG--------LKMSATFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os03g0780600 Tubulin beta-1 chain (Beta-1 tubulin)
Length = 444
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 259/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHG+ G D+ + R N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGVDATGRYAGDSDLQLER--INVYYNEASGGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
+VPRA+ +DLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
++ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RG--------LKMAATFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os01g0805900 Tubulin beta-2 chain (Beta-2 tubulin)
Length = 447
Score = 353 bits (906), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHGI P G ++ + R N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCDEHGIDPTGRYTGNSDLQLER--VNVYYNEASCGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
VPRA+ +DLEP +D V+TGPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RGLS--------MASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os02g0167300 Tubulin beta-3 chain (Beta-3 tubulin)
Length = 447
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHGI G D+ + R N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLER--INVYYNEASGGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
VPRA+ +DLEP +D V++GP+ Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
++ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 NG--------LKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os01g0282800 Similar to Tubulin beta-5 chain (Beta-5 tubulin)
Length = 447
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G+ WE+ C EHGI P G T + + N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVG--TSDLQLERVNVYYNEASCGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
VPRA+ +DLEP +D V+TGPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ A I N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RG--------LSMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os05g0413200 Beta-tubulin
Length = 444
Score = 352 bits (904), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 164/428 (38%), Positives = 258/428 (60%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G+ WE+ C EHGI P G T + + N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYAG--TSDLQLERVNVYYNEASCGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
VPRA+ +DLEP +D V+TGPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ A + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RGLS--------MASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>AK110204
Length = 447
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 253/428 (59%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ + GQ G QVG + W+ EHG+ G+ + T + + N +F+E S K
Sbjct: 1 MREIVHLQTGQCGNQVGAAFWQTISGEHGLDSSGVY--NGTSDLQLERMNVYFNEASGNK 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
+VPRA+ VDLEP +D V+ GP+ QLF P+ + + A NN+A+GHYT G E+VD LD
Sbjct: 59 YVPRAVLVDLEPGTMDAVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDQVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+R+ A+ C LQGF + +++ + + F++ PSP++S
Sbjct: 119 VVRREAEGCDCLQGFQITHSLGGGTGAGMGTLLISKIREGFPDRMMATFSVLPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E++D +DNEA+YDIC R+L + P+Y +LN L+S V+S +TT
Sbjct: 179 VVEPYNATLSIHQLVENSDATFCIDNEALYDICMRTLKLSNPSYGDLNHLVSAVMSGVTT 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + N+VP+PR+HF + +AP+ S SVPE+T +F+P +
Sbjct: 239 CLRFPGQLNSDLRKLAVNMVPFPRLHFFMIGFAPLTSRGAHSFRAVSVPELTQQIFDPKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+MA D R+G+Y+ C +YRG V K+V + +++ + T FV+W P + PP
Sbjct: 299 MMAAADFRNGRYLTCSAIYRGKVSMKEVEDQIRNVQNKNTAYFVEWIPNNVMTALCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
++ + + N+T++ E+F R+ +F M+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 RG--------LKMSSTFVGNSTSIQELFKRVGDQFTAMFRRKAFLHWYTGEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os03g0661300 Beta-tubulin (Beta-3 tubulin) (Tubulin beta subunit)
Length = 446
Score = 347 bits (890), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 160/428 (37%), Positives = 255/428 (59%), Gaps = 10/428 (2%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHG+ P G + + R N +F+E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGVDPTGTYTGTSPQQLER--INVYFNEASGGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
HVPRA+ +DLEP +D +++GP +F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 HVPRAVLMDLEPGTMDSLRSGPIGGIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + P++ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
+ A + N+T++ E+F R+ +F M+ ++AF+HWY EGM+E EF+E
Sbjct: 359 VG--------LSMASTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTSEGMDEMEFTE 410
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 411 AESNMNDL 418
>Os06g0671900 Similar to Beta-tubulin
Length = 433
Score = 335 bits (859), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 252/428 (58%), Gaps = 23/428 (5%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHGI G D+ + R N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGKYSGDSDLQLER--INVYYNEASGGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
+VPRA+ +DLEP +D V++GPY Q+F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 YVPRAVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLD 118
Query: 121 RLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQISTA 180
+RK A+NC LQGF V +++ +Y + L F+++PSP++S
Sbjct: 119 VVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDT 178
Query: 181 VVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTT 240
VVEPYN+ LS H L+E+ D ++LDNEA+YDIC R+L + PT+ +LN LIS +S +T
Sbjct: 179 VVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTC 238
Query: 241 SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPAS 300
LRF G +N D+ + NL+P+PR+HF + +AP+ S + +VPE+T +++ +
Sbjct: 239 CLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKN 298
Query: 301 VMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPP 360
+M DPRHG+Y+ M+RG + K+V+ + +++ + + FV+W P K + PP
Sbjct: 299 MMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPP 358
Query: 361 TAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSE 420
++ A I N+T++ E+ ++AF+HWY GEGM+E EF+E
Sbjct: 359 IG--------LKMASTFIGNSTSIQEM-------------RKAFLHWYTGEGMDEMEFTE 397
Query: 421 AREDLAAL 428
A ++ L
Sbjct: 398 AESNMNDL 405
>AK110638
Length = 465
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 154/431 (35%), Positives = 257/431 (59%), Gaps = 14/431 (3%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDG-LMPSDTTPGIARDAFNTFFSETSS- 58
MRE+I+ GQAG Q+ ++ W+ EHG+ DG + S+ +A+ FF +
Sbjct: 1 MRELITFACGQAGNQISSAFWQCILNEHGLDGDGRYIGSNEDEQLAK--VGVFFEPSGQE 58
Query: 59 GKHVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLC 118
GK+VPR++ VDLEP +D +++GP +LF P+ I+ + A NNF++G+YT G E++D
Sbjct: 59 GKYVPRSIQVDLEPGTMDTIRSGPLGKLFRPDNYINGESGAGNNFSKGYYTEGAELLDQV 118
Query: 119 LDRLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSPQIS 178
LD RK A+ LQGF + +++ ++ + +++ PSP++S
Sbjct: 119 LDVARKEAEKTDMLQGFQLVHSLGGGTGSGLGTNLLTKLREEFPDRMLATWSVLPSPKVS 178
Query: 179 TAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSL 238
VVEPYN+ LS H L+E++D+ LDNEA+YDIC+R+L + PTY++LN +IS +S
Sbjct: 179 DTVVEPYNATLSFHQLVENSDMTFCLDNEALYDICQRTLRTKNPTYSDLNSIISFAMSGC 238
Query: 239 TTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEP 298
+T+LRF G +N D+ + NLVP+PR+HF + +AP+++ ++ E+ ++P
Sbjct: 239 STTLRFPGQLNSDLRKMGVNLVPFPRLHFFTTGFAPLVAPGSKAYQSLKTSELIAQGYDP 298
Query: 299 ASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGI-NY 357
++MA DPRHGKY+ ++RG+V +DV +++++ + FV+W P + +
Sbjct: 299 KNIMAAIDPRHGKYLTVAAIFRGNVNARDVENEMYNLREKNPAGFVEWIPNNVLTSLCDI 358
Query: 358 QPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGE 417
PP +++ + I+N T++ E+F R +F LM+ ++AF+HWY GEGM+E E
Sbjct: 359 APP---------QLKMSATFIANTTSIQELFKRTHDQFSLMFRRKAFLHWYTGEGMDEME 409
Query: 418 FSEAREDLAAL 428
F+EA +L L
Sbjct: 410 FTEAESNLMDL 420
>Os05g0156600 Similar to Tubulin gamma-1 chain (Gamma-1 tubulin)
Length = 469
Score = 228 bits (581), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 134/441 (30%), Positives = 236/441 (53%), Gaps = 23/441 (5%)
Query: 2 REIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGKH 61
REII+I +GQ G Q+G W+ CLEHGI DGL+ T G R + FF + +
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCLEHGIGKDGLLEDFATQGGDRK--DVFFYQADDQHY 60
Query: 62 VPRALFVDLEPTVIDEVKTGPYRQLFHPEQLI--SYKEDAANNFARGHYTVGREVVDLCL 119
+PRAL VDLEP VI+ ++ YR L++ E + + A NN+A G Y G +VVD +
Sbjct: 61 IPRALLVDLEPRVINGIQNSEYRNLYNHENIFVAEHGGGAGNNWASG-YHQGEQVVDDIM 119
Query: 120 DRLRKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXXVDYGRKSKLGFTIYPSP-QIS 178
D + + AD L+GF++ +++ Y +K ++++P+ + S
Sbjct: 120 DMIDREADGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETS 179
Query: 179 TAVVEPYNSVLSTHSLIEHTDVVVLLDNEAIYDICKRSLDIERPTYTNLNRLISQVISSL 238
VV+PYNS+L+ L + D VV+LDN A+ I L + PT+ N L+S V+S+
Sbjct: 180 DVVVQPYNSLLTLKRLTLNADCVVVLDNTALNRIAVERLHLANPTFAQTNSLVSTVMSAS 239
Query: 239 TTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISVEKAFH--EQHSVPEITNSVF 296
TT+LR+ G +N D+ +L+P PR HF+++ Y P ++VE+ + + +V ++ +
Sbjct: 240 TTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTP-LTVERQVNMIRKTTVLDVMRRLL 298
Query: 297 EPASVMAKCDPRH-----GKYMACCLMYRGDVVPKDVNAAVHSIKTRRTVQFVDWCPTGF 351
+ ++M R+ KY++ + +G+V P V+ ++ I+ R+ V F++W P
Sbjct: 299 QTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESLQRIRERKLVNFIEWGPASI 358
Query: 352 KCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLMYAKRAFVHWY--- 408
+ ++ + P R + M++N+T++ +FS+ +++ + K+AF+ Y
Sbjct: 359 QVALSRKSPYVQ-----TTHRVSGLMLANHTSIRHLFSKCLGQYEKLRKKQAFLDNYRKF 413
Query: 409 -VGEGMEEGEFSEAREDLAAL 428
+ E + EF E+RE + +L
Sbjct: 414 PMFEDNDLSEFDESREIIESL 434
>Os03g0105600 Similar to Tubulin beta-2 chain (Beta-2 tubulin)
Length = 133
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 60/134 (44%), Positives = 84/134 (62%), Gaps = 2/134 (1%)
Query: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGLMPSDTTPGIARDAFNTFFSETSSGK 60
MREI+ I GQ G Q+G WE+ C EHGI G D+ + R N +++E S G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDATGRYDGDSDLQLER--VNVYYNEASCGR 58
Query: 61 HVPRALFVDLEPTVIDEVKTGPYRQLFHPEQLISYKEDAANNFARGHYTVGREVVDLCLD 120
VPRA+ +DLEP +D V++GPY +F P+ + + A NN+A+GHYT G E++D LD
Sbjct: 59 FVPRAVLMDLEPGTMDSVRSGPYGHIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLD 118
Query: 121 RLRKLADNCTGLQG 134
+RK A+NC LQG
Sbjct: 119 VVRKEAENCDCLQG 132
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.137 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,058,820
Number of extensions: 571465
Number of successful extensions: 1061
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1017
Number of HSP's successfully gapped: 19
Length of query: 449
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 345
Effective length of database: 11,605,545
Effective search space: 4003913025
Effective search space used: 4003913025
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)