BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0724500 Os02g0724500|Os02g0724500
(371 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0724500 Protein of unknown function DUF250 domain cont... 690 0.0
Os06g0297600 Protein of unknown function DUF250 domain cont... 108 7e-24
Os01g0167500 Protein of unknown function DUF250 domain cont... 89 5e-18
Os05g0168700 Protein of unknown function DUF250 domain cont... 87 2e-17
Os10g0479700 Protein of unknown function DUF250 domain cont... 83 3e-16
Os05g0215800 Protein of unknown function DUF250 domain cont... 80 2e-15
Os02g0614500 Protein of unknown function DUF250 domain cont... 80 2e-15
Os02g0628200 Protein of unknown function DUF250 domain cont... 79 4e-15
Os01g0823200 Conserved hypothetical protein 79 7e-15
Os07g0581000 Protein of unknown function DUF250 domain cont... 70 2e-12
Os12g0154000 Protein of unknown function DUF250 domain cont... 69 5e-12
Os12g0154600 Protein of unknown function DUF250 domain cont... 69 5e-12
Os06g0506200 Protein of unknown function DUF250 domain cont... 65 6e-11
>Os02g0724500 Protein of unknown function DUF250 domain containing protein
Length = 371
Score = 690 bits (1781), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/371 (92%), Positives = 345/371 (92%)
Query: 1 MMKLRWWRVDASEVAAVTAMGVWEAVLAGGGRRFLKRKDSDAGEXXXXXXXXXXXXXXFV 60
MMKLRWWRVDASEVAAVTAMGVWEAVLAGGGRRFLKRKDSDAGE FV
Sbjct: 1 MMKLRWWRVDASEVAAVTAMGVWEAVLAGGGRRFLKRKDSDAGETVTLLLVALALALAFV 60
Query: 61 RVCEDFGAGNSTKDAPFRGRALEELRSSLYNEMHSSEGAKRQQQRFCGPSVALTFNFAVA 120
RVCEDFGAGNSTKDAPFRGRALEELRSSLYNEMHSSEGAKRQQQRFCGPSVALTFNFAVA
Sbjct: 61 RVCEDFGAGNSTKDAPFRGRALEELRSSLYNEMHSSEGAKRQQQRFCGPSVALTFNFAVA 120
Query: 121 VGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKSTPFSSLFAL 180
VGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKSTPFSSLFAL
Sbjct: 121 VGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKSTPFSSLFAL 180
Query: 181 GAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKVITLAIVSFGV 240
GAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKVITLAIVSFGV
Sbjct: 181 GAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKVITLAIVSFGV 240
Query: 241 AVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQSGNWTALAATSALSHVVLGQFKT 300
AVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQSGNWTALAATSALSHVVLGQFKT
Sbjct: 241 AVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQSGNWTALAATSALSHVVLGQFKT 300
Query: 301 IVIMLSGYLIFSSDPGITSICGAIVALGGMSVYTYLGLKESTTTGXXXXXXXXXXXXGDG 360
IVIMLSGYLIFSSDPGITSICGAIVALGGMSVYTYLGLKESTTTG GDG
Sbjct: 301 IVIMLSGYLIFSSDPGITSICGAIVALGGMSVYTYLGLKESTTTGKKPPLAQKPKAAGDG 360
Query: 361 EKPGLEHEDSV 371
EKPGLEHEDSV
Sbjct: 361 EKPGLEHEDSV 371
>Os06g0297600 Protein of unknown function DUF250 domain containing protein
Length = 95
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 65/94 (69%), Gaps = 7/94 (7%)
Query: 285 AATSALSHVVLGQFKTIVIMLSGYLIFSSDPGITSICGAIVALGGMSVYTYLGLKESTTT 344
+ATSAL+HVVLGQFKTIVIMLS YL+F+SDPG TS+CGAI+ALGGMSVYTYLGLKES +
Sbjct: 2 SATSALAHVVLGQFKTIVIMLSSYLVFNSDPGFTSLCGAIIALGGMSVYTYLGLKESASG 61
Query: 345 GXXXXXXXXXXXX-------GDGEKPGLEHEDSV 371
G DGEKP DSV
Sbjct: 62 GKRAPSTSRQNSHLLKSKVIVDGEKPETRPIDSV 95
>Os01g0167500 Protein of unknown function DUF250 domain containing protein
Length = 356
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 85/153 (55%), Gaps = 5/153 (3%)
Query: 126 ANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKSTPFSSLFALGAVMS 185
NK +M S+GF F L+ H V F + + M + P T + G +
Sbjct: 29 CNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEHKPFDART----VMGFGVLNG 84
Query: 186 LSTGLAN-NFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKVITLAIVSFGVAVAT 244
+S GL N + SVGFYQM K+A+ P V+ E + F+K+ S ++L+++ FGV VAT
Sbjct: 85 ISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLFFRKKFSRNIQLSLSVLLFGVGVAT 144
Query: 245 VTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
VTDL+ N G+V++L I+ + + +I+ + +Q+
Sbjct: 145 VTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQK 177
>Os05g0168700 Protein of unknown function DUF250 domain containing protein
Length = 354
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 84/153 (54%), Gaps = 5/153 (3%)
Query: 126 ANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKSTPFSSLFALGAVMS 185
NK +M S+GF F L+ H V F + + M P T + G +
Sbjct: 29 CNKALMSSLGFNFATTLTSWHLLVTFCSLHVALWMKFFEHKPFDSRT----VMGFGVLNG 84
Query: 186 LSTGLAN-NFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKVITLAIVSFGVAVAT 244
+S GL N + SVGFYQM K+A+ P V+ E + F+K+ S ++L+++ FGV VAT
Sbjct: 85 ISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLFFRKKFSRSIQLSLSVLLFGVGVAT 144
Query: 245 VTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
VTDL+ N G+V++L I+ + + +I+ + +Q+
Sbjct: 145 VTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQK 177
>Os10g0479700 Protein of unknown function DUF250 domain containing protein
Length = 370
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKS 171
AL + +V I++ NK ++ ++GF F L+ H V F + + + + P
Sbjct: 17 ALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPIDAQ 76
Query: 172 TPFSSLFALGAVMSLSTGLANNFPLF-SVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKV 230
T S G + +S GL N F SVGFYQM K+A+ P ++ E + K+ S
Sbjct: 77 TVIS----FGLLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIK 132
Query: 231 ITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
I+L ++ GV +A+VTDL+ N G+++A+ I + V++IL + +Q+
Sbjct: 133 ISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQR 179
>Os05g0215800 Protein of unknown function DUF250 domain containing protein
Length = 335
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/198 (32%), Positives = 101/198 (51%), Gaps = 19/198 (9%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTM-----SMLPVA 166
A FN +VGIIM NK +M + GF F L+ +H+A ++ ++K + S LPV
Sbjct: 17 AWMFNIVTSVGIIMVNKALMATHGFSFATTLTGLHFATTTLMTLVMKWLGYIQPSYLPVP 76
Query: 167 PPSKSTPFSSLFALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVS 226
K F++L +G +SL SVGFYQ+AK+ + P + E + + R S
Sbjct: 77 ELIKFVFFANLSIVGMNVSLMWN--------SVGFYQIAKLCIIPVLCFLEILFDKVRYS 128
Query: 227 SQKVITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQS---GNWTA 283
++ +V GVAV TVTD+ N G + A+ + +A+ + +LQ+ G++
Sbjct: 129 RDTKFSIMVVLVGVAVCTVTDVSVNSQGLIAAIIAVWSTALQQHYVHHLQRKYSLGSFNL 188
Query: 284 LAATS---ALSHVVLGQF 298
L T+ A S +VLG F
Sbjct: 189 LGHTAPAQAASLLVLGPF 206
>Os02g0614500 Protein of unknown function DUF250 domain containing protein
Length = 331
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 19/211 (9%)
Query: 99 AKRQQQRFCGPSVALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILK 158
A + +++ + A FN +VGIIM NK +M + GF F L+ +H+A ++ ++K
Sbjct: 4 ANKAERKAVLDAGAWMFNVVTSVGIIMVNKALMATHGFSFATTLTGLHFATTTLMTLVMK 63
Query: 159 TM-----SMLPVAPPSKSTPFSSLFALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTI 213
+ S LP+ K F++L +G +SL SVGFYQ+AK+ + P +
Sbjct: 64 WLGHIQPSYLPLPELVKFVFFANLSIVGMNVSLMWN--------SVGFYQIAKLCIIPVL 115
Query: 214 VVAEFMIFQKRVSSQKVITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWS 273
+ E + + R S +++ +V GVAV TVTD+ N G + A+ + +A+ +
Sbjct: 116 CILEILFDKVRYSRNTKLSIVLVLVGVAVCTVTDVSVNSKGLLAAVIAVWSTALQQHYVH 175
Query: 274 NLQQS---GNWTALAATS---ALSHVVLGQF 298
+LQ+ G++ L T+ A S ++LG F
Sbjct: 176 HLQKKYSLGSFNLLGHTAPAQAASLLILGPF 206
>Os02g0628200 Protein of unknown function DUF250 domain containing protein
Length = 341
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 128/292 (43%), Gaps = 66/292 (22%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKS 171
+LT + A +V I++ NK ++ ++GF F L+ H V F + + + M K+
Sbjct: 12 SLTLSVASSVSIVICNKALISTLGFPFATTLTSWHLMVTFCTLHVAQRMRFFE----PKA 67
Query: 172 TPFSSLFALGAVMSLSTGLAN-NFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKV 230
++ G + S GL N + S+GFYQM K+A+ P V+ E + +KR S
Sbjct: 68 IDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVMLETIFLKKRFSESIK 127
Query: 231 ITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQ------------QS 278
+L I+ GV +A+VTDL+ N G+V++ I + V +IL + +Q QS
Sbjct: 128 FSLLILLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQKRLKVSSTQLLYQS 187
Query: 279 GNWTA-------------LAATSALSH-------------------------VVLG---- 296
+ A L + S +H +V+G
Sbjct: 188 APYQAAILFATGPFVDQLLTSRSVFAHKYTAPVVGFIVLSCLIAVSVNFSTFLVIGTTSP 247
Query: 297 -------QFKTIVIMLSGYLIFSSDPGITSICGAIVALGGMSVYTYLGLKES 341
KT +++ GY + + +I G +VA+ GM++Y+Y ++ES
Sbjct: 248 VTYQVLGHLKTCLVLSFGYTLLHDPFTMRNILGILVAIFGMALYSYFSVRES 299
>Os01g0823200 Conserved hypothetical protein
Length = 182
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 105 RFCGPSVALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLP 164
R G + AL + +V I++ NK +M ++GF F L+ H V F + + M +
Sbjct: 5 RMAGTAAALGLSVVSSVSIVVCNKALMSTLGFVFATTLTSWHLLVTFCSLHVALQMKLFE 64
Query: 165 VAPPSKSTPFSSLFALGAVMSLSTGLAN-NFPLFSVGFYQMAKIAVTPTIVVAEFMIFQK 223
+K ++ G + +S GL N + S+GFYQ+ K+A+ P V E ++F+K
Sbjct: 65 ----NKDLDPKTIIGFGILNGISIGLLNLSLGFNSIGFYQVTKLAIIPCTVSLETILFRK 120
Query: 224 RVSSQKVITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSN 274
S + + LA++ FGV VATVTDL+ N G++++L ++ + +++I+ S
Sbjct: 121 TFSRRIQMALAVLLFGVGVATVTDLQLNRLGSLLSLFAVLTTCISQIVSSK 171
>Os07g0581000 Protein of unknown function DUF250 domain containing protein
Length = 345
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 108/195 (55%), Gaps = 11/195 (5%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKS 171
A N +VGIIMANK +M S G+ F A +L + F + A++ +S SK
Sbjct: 15 AWAMNVVSSVGIIMANKQLMSSSGYAFSFATTLTGFH--FTVTALVGWISNATGYSVSKH 72
Query: 172 TPFSSL--FALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQK 229
P L F+L A S+ TG+ + L SVGFYQ++K+++ P + + E+++ K +++
Sbjct: 73 VPLWELVWFSLVANTSI-TGMNLSLMLNSVGFYQISKLSMIPVVCLMEWVLNSKHYTTKV 131
Query: 230 VITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQS---GNWTALAA 286
+ + +V+ GV + TVTD+E N G + A + +++ +I + Q+ G++ L+
Sbjct: 132 ISAVVVVAAGVGICTVTDVEVNAKGFICACVAVFCTSLQQITIGSFQKKYNIGSFELLSK 191
Query: 287 TS---ALSHVVLGQF 298
T+ A+S ++LG F
Sbjct: 192 TAPIQAVSLIILGPF 206
>Os12g0154000 Protein of unknown function DUF250 domain containing protein
Length = 334
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 13/145 (8%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTM-----SMLPVA 166
A +FN +VGIIM NK +M + GF F L+ +H+ ++ + + + S LP+
Sbjct: 18 AWSFNITTSVGIIMVNKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPIP 77
Query: 167 PPSKSTPFSSLFALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVS 226
K FS+L +G +SL SVGFYQ+AK+ + P + E + + S
Sbjct: 78 DLIKFVIFSNLSIVGMNVSLMWN--------SVGFYQIAKLCMIPASCLLEVVFDRVHYS 129
Query: 227 SQKVITLAIVSFGVAVATVTDLEFN 251
+++ +V GVAV TVTD+ N
Sbjct: 130 RDTKLSIMVVLIGVAVCTVTDVSVN 154
>Os12g0154600 Protein of unknown function DUF250 domain containing protein
Length = 333
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 84/172 (48%), Gaps = 15/172 (8%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAI------LKTMSMLPV 165
A +FN +VGIIM NK +M + GF F L+ +H+ V LM I L S LP+
Sbjct: 18 AWSFNITTSVGIIMVNKALMATHGFSFATTLTGLHF-VTTTLMTIVFRWLGLSQPSHLPL 76
Query: 166 APPSKSTPFSSLFALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRV 225
K FS+L +G +SL SVGFYQ+AK+ + P + E +
Sbjct: 77 PDLIKFVIFSNLSIVGMNVSLMWN--------SVGFYQIAKLCMIPASCLLEVVFDHVHY 128
Query: 226 SSQKVITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
S +++ +V GVAV TVTD+ N G A+ + +A+ + LQ+
Sbjct: 129 SRDTKLSIMVVLIGVAVCTVTDVSVNAKGLAAAVIAVWSTALQQYYVHFLQR 180
>Os06g0506200 Protein of unknown function DUF250 domain containing protein
Length = 226
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 89/167 (53%), Gaps = 5/167 (2%)
Query: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKS 171
+L + A +V I++ NK ++ ++GF F L+ H + F + + + + K+
Sbjct: 14 SLALSVASSVAIVICNKALISTLGFPFATTLTSWHLMMTFCTLHVAQRLHFFE----PKA 69
Query: 172 TPFSSLFALGAVMSLSTGLAN-NFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQKV 230
++ G + S GL N + S+GFYQM K+A+ P V+ E + +KR S
Sbjct: 70 IDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKRFSESIK 129
Query: 231 ITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
++L ++ GV +A+VTDL+ N G+V++ I + V +IL + +Q+
Sbjct: 130 LSLLVLLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQK 176
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.134 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,719,419
Number of extensions: 373880
Number of successful extensions: 979
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 979
Number of HSP's successfully gapped: 14
Length of query: 371
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 269
Effective length of database: 11,709,973
Effective search space: 3149982737
Effective search space used: 3149982737
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 157 (65.1 bits)