Os06g0297600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os06g0297600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 127.28 | 0.53 | 7.6 | -2.13 | 2.5 | 1.35 | -0.222 | -3.53 | -0.629 | 18.6 | 24.9 | 1358 | -- | -- |
| 129.88 | 0.531 | 7.53 | -1.49 | 2.44 | 1.15 | -0.205 | -- | -0.614 | 18.7 | 21.29 | 6730 | -- | -- |
| 127.36 | 0.526 | 7.6 | -2.14 | 2.5 | 1.38 | -- | -3.68 | -0.625 | 18.6 | 25 | 1320 | -- | -- |
| 129.09 | 0.529 | 7.54 | -1.4 | 2.44 | 1.14 | -- | -- | -0.671 | 18.7 | 21.01 | 8014 | -- | -- |
| 382.78 | 0.911 | 7.54 | -2.27 | -- | 2.06 | -- | -3.51 | -0.774 | -- | 24.78 | 2014 | -- | -- |
| 170.83 | 0.613 | 7.45 | -0.827 | 2.46 | -- | -0.242 | -- | -0.255 | 18.8 | -- | -- | -- | -- |
| 170.97 | 0.612 | 7.45 | -0.823 | 2.46 | -- | -- | -- | -0.256 | 18.8 | -- | -- | -- | -- |
| 266.94 | 0.761 | 7.46 | -1.42 | -- | 2.75 | -- | -- | -0.584 | -- | 24.2 | 554 | -- | -- |
| 166.56 | 0.601 | 7.48 | -- | 2.43 | 0.735 | -- | -- | -0.365 | 18.7 | 26.55 | 8012 | -- | -- |
| 486.83 | 1.03 | 7.4 | -0.877 | -- | -- | -- | -- | -0.303 | -- | -- | -- | -- | -- |
| 188.83 | 0.643 | 7.43 | -- | 2.47 | -- | -- | -- | -0.164 | 18.8 | -- | -- | -- | -- |
| 316.75 | 0.829 | 7.42 | -- | -- | 2.53 | -- | -- | -0.389 | -- | 24.4 | 534 | -- | -- |
| 507.12 | 1.05 | 7.38 | -- | -- | -- | -- | -- | -0.206 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 118.88 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 6 |
| 5 | 119.01 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 2 |
| 12 | 120.90 | radiation | 1.0 | 720 | < th | dose dependent | sin | 13 | NA |
| 30 | 122.04 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 1 |
| 34 | 122.16 | radiation | 1.0 | 1440 | < th | dose dependent | sin | 16 | NA |
| 39 | 122.28 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 21 |
| 52 | 122.51 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 15 |
| 54 | 122.57 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 17 | 3 |
| 58 | 122.60 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 8 | 11 |
| 68 | 122.66 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 21 | 1 |
| 81 | 122.78 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 17 | 3 |
| 96 | 122.86 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 16 | 11 |
| 139 | 123.73 | humidity | 90.0 | 43200 | < th | dose independent | sin | 15 | NA |
| 148 | 123.97 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 17 | 9 |
| 149 | 123.97 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
| 159 | 123.98 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 11 |
| 167 | 124.14 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 18 | 7 |
| 170 | 124.16 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 176 | 124.23 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 21 | 3 |
| 203 | 124.72 | humidity | 90.0 | 43200 | > th | dose independent | sin | 15 | NA |
| 232 | 125.05 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 239 | 125.10 | radiation | 1.0 | 720 | < th | dose independent | sin | 14 | NA |
| 243 | 125.11 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 19 | 2 |
| 249 | 125.20 | radiation | 1.0 | 720 | > th | dose independent | sin | 13 | NA |
| 259 | 125.28 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 3 |
| 261 | 125.33 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 272 | 125.40 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 285 | 125.52 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 300 | 125.60 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 301 | 125.60 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 303 | 125.62 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 315 | 125.71 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 9 |
| 319 | 125.73 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 4 | 15 |
| 330 | 125.80 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 339 | 125.84 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 12 | 18 |
| 341 | 125.85 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 1 |
| 347 | 125.87 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 387 | 126.02 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 20 | 1 |
| 410 | 126.13 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 12 |
| 439 | 126.32 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 20 | 23 |
| 478 | 126.53 | temperature | 20.0 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 482 | 126.57 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 7 |
| 488 | 126.59 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 504 | 126.67 | humidity | 90.0 | 43200 | > th | dose dependent | sin | 15 | NA |
| 509 | 126.71 | radiation | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 568 | 126.94 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 588 | 127.04 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 8 | 13 |
| 627 | 127.15 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 10 | 17 |
| 655 | 127.24 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 16 | 21 |
| 658 | 127.25 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 11 | 5 |
| 716 | 127.39 | temperature | 25.0 | 1440 | > th | dose dependent | sin | 20 | NA |
| 732 | 127.42 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 21 | 7 |
| 737 | 127.43 | radiation | 1.0 | 720 | < th | dose independent | rect. | 16 | 14 |
| 739 | 127.43 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 799 | 127.52 | wind | 5.0 | 43200 | > th | dose independent | rect. | 9 | 7 |
| 840 | 127.58 | radiation | 1.0 | 43200 | < th | dose dependent | rect. | 19 | 9 |
| 842 | 127.59 | humidity | 90.0 | 43200 | < th | dose independent | no | NA | NA |
| 862 | 127.62 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 20 | 23 |
| 886 | 127.65 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 929 | 127.72 | wind | 5.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 949 | 127.74 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 10 | 23 |
| 950 | 127.75 | temperature | 25.0 | 1440 | > th | dose dependent | no | NA | NA |
| 956 | 127.76 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 23 | 23 |