BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0633300 Os02g0633300|J100035J24
(240 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0633300 Similar to Iron-phytosiderophore transporter p... 343 5e-95
Os04g0674600 Oligopeptide transporter OPT superfamily protein 144 5e-35
Os02g0116400 Oligopeptide transporter OPT superfamily protein 139 1e-33
Os01g0829900 Oligopeptide transporter OPT superfamily protein 119 1e-27
Os04g0542200 Similar to Iron-phytosiderophore transporter p... 118 4e-27
Os01g0238700 Oligopeptide transporter OPT superfamily protein 107 9e-24
Os04g0542800 Similar to Iron-phytosiderophore transporter p... 105 3e-23
Os02g0116300 Oligopeptide transporter OPT superfamily protein 93 1e-19
Os04g0524500 Oligopeptide transporter OPT superfamily protein 89 4e-18
Os02g0649900 Similar to Iron-phytosiderophore transporter p... 86 3e-17
Os05g0251900 Oligopeptide transporter OPT superfamily protein 83 2e-16
Os05g0252000 Oligopeptide transporter OPT superfamily protein 78 6e-15
>Os02g0633300 Similar to Iron-phytosiderophore transporter protein yellow stripe
1
Length = 240
Score = 343 bits (881), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 169/184 (91%), Positives = 169/184 (91%)
Query: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA
Sbjct: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
Query: 117 GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSGKRLRRFRLYSDFY 176
GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSGKRLRRFRLYSDFY
Sbjct: 117 GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSGKRLRRFRLYSDFY 176
Query: 177 CTTFXXXXXXXXXXXXXXXMSTSELNGASIRGIHLVSASACYNVTLTGGCDFGLWLCGSM 236
CTTF MSTSELNGASIRGIHLVSASACYNVTLTGGCDFGLWLCGSM
Sbjct: 177 CTTFVGLGLLVAASVLCVLMSTSELNGASIRGIHLVSASACYNVTLTGGCDFGLWLCGSM 236
Query: 237 MQQI 240
MQQI
Sbjct: 237 MQQI 240
>Os04g0674600 Oligopeptide transporter OPT superfamily protein
Length = 708
Score = 144 bits (364), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 85/108 (78%), Gaps = 1/108 (0%)
Query: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
++ SVERVF + VP W+EQ+TLRA VSALL MFSVIVMKLNLTTGIIPSLNVSA
Sbjct: 35 EEAAVVSVERVFEGRVVPGWKEQVTLRALAVSALLGAMFSVIVMKLNLTTGIIPSLNVSA 94
Query: 117 GLLGFFFVRLWTSAVERIGLLK-QPFTRQENTVIQTCVVSAYGIAFSG 163
GLLGFF + WT +++ G+ +PFTRQENTV+QTCVV+ GIAFSG
Sbjct: 95 GLLGFFLLTSWTKLLDKAGVASVRPFTRQENTVVQTCVVACSGIAFSG 142
>Os02g0116400 Oligopeptide transporter OPT superfamily protein
Length = 694
Score = 139 bits (351), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 82/103 (79%)
Query: 61 ATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAGLLG 120
+ S E+ F KA+P+W EQ+T+R+ VVSA+L S IVMKLNLT+GI+PSLNVSAGLL
Sbjct: 19 SVSTEKAFEGKALPAWSEQITVRSLVVSAVLGTFLSFIVMKLNLTSGIVPSLNVSAGLLA 78
Query: 121 FFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
FF ++ WTSA+ER G+ +PFTRQENTV+QTCV+S IAFSG
Sbjct: 79 FFLMKTWTSALERCGVFPKPFTRQENTVVQTCVISCSSIAFSG 121
>Os01g0829900 Oligopeptide transporter OPT superfamily protein
Length = 679
Score = 119 bits (299), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 56/107 (52%), Positives = 73/107 (68%)
Query: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
D D S ER F + VP W EQ+TLRA V S L V S ++M L T+GIIPSLN+SA
Sbjct: 6 DPRDGPSTERAFEGQPVPPWTEQVTLRAVVASVALGVALSSVMMNLVFTSGIIPSLNISA 65
Query: 117 GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
GLLGFF ++ WT ++++G +PFTRQEN V+QTCVV+ + +SG
Sbjct: 66 GLLGFFLLKAWTRLLDQLGSPGRPFTRQENAVVQTCVVACASMTYSG 112
>Os04g0542200 Similar to Iron-phytosiderophore transporter protein yellow stripe
1
Length = 657
Score = 118 bits (295), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 55/92 (59%), Positives = 67/92 (72%)
Query: 72 AVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAGLLGFFFVRLWTSAV 131
A P WREQLT R V S + M+SVIVMKLNLTTG++P+LNVSA L+ F +R WT A+
Sbjct: 23 APPPWREQLTARGLVASLAVGAMYSVIVMKLNLTTGLVPTLNVSAALIAFVVLRGWTQAL 82
Query: 132 ERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
R+G +PFTRQENTV+QTC V+ Y IA G
Sbjct: 83 ARLGFAARPFTRQENTVVQTCAVACYSIAVGG 114
>Os01g0238700 Oligopeptide transporter OPT superfamily protein
Length = 708
Score = 107 bits (266), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 65/96 (67%)
Query: 60 DATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAGLL 119
+A SVE FA + P W +Q+T+RA VS +L +FS + M+ LT G +PS N+SA LL
Sbjct: 12 EAPSVEAAFAGQPPPPWWQQVTVRAVAVSVVLGTLFSFMAMRTGLTAGFVPSFNMSASLL 71
Query: 120 GFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVS 155
FF ++ WT + R G+ QPFTRQEN V+QTCV+S
Sbjct: 72 SFFIIKSWTRLMARCGVASQPFTRQENVVVQTCVIS 107
>Os04g0542800 Similar to Iron-phytosiderophore transporter protein yellow stripe
1
Length = 726
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/89 (59%), Positives = 70/89 (78%)
Query: 73 VPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAGLLGFFFVRLWTSAVE 132
VP WREQ+T R V + L+ V+++VIVMKL+LTTG+IP+LNVSA LL F +R WT A++
Sbjct: 90 VPPWREQVTARGMVAALLIGVVYTVIVMKLSLTTGLIPTLNVSAALLAFLALRGWTHALD 149
Query: 133 RIGLLKQPFTRQENTVIQTCVVSAYGIAF 161
R+G+ +PFTRQENTVIQTC V+ Y I +
Sbjct: 150 RLGIASRPFTRQENTVIQTCAVACYTIGY 178
>Os02g0116300 Oligopeptide transporter OPT superfamily protein
Length = 683
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 67/107 (62%)
Query: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
D + S E F + VPS E +T R+ VVS +L+V S++ MK+ L++G IPS ++ A
Sbjct: 6 DFQEGISTEHAFEAEPVPSLSETITPRSMVVSFILSVTLSIVAMKVTLSSGFIPSFSIPA 65
Query: 117 GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
GLLGF R ++ + + PFTRQENT+IQTCVV+ I F+G
Sbjct: 66 GLLGFCVSRASIRILDYFAVAQLPFTRQENTIIQTCVVACTSITFTG 112
>Os04g0524500 Oligopeptide transporter OPT superfamily protein
Length = 629
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 39/46 (84%), Positives = 44/46 (95%)
Query: 118 LLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
LLGFFFVRLWT+A+ER+GLL+QPFTRQENTVIQTCVV+ Y IAFSG
Sbjct: 19 LLGFFFVRLWTAAIERVGLLRQPFTRQENTVIQTCVVAGYDIAFSG 64
>Os02g0649900 Similar to Iron-phytosiderophore transporter protein yellow stripe
1
Length = 674
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/109 (47%), Positives = 67/109 (61%), Gaps = 15/109 (13%)
Query: 58 DPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAG 117
D A + ERV P WREQ+T R V + L+ +++VI+MKL LTTGIIP+LNVSA
Sbjct: 21 DGAAAAAERV------PPWREQVTARGMVAALLIGFVYTVIIMKLALTTGIIPTLNVSAA 74
Query: 118 LLGFFFVRLWTSAVERI---------GLLKQPFTRQENTVIQTCVVSAY 157
LL F +R WT A + ++PFTRQENTV+QTC V+ Y
Sbjct: 75 LLAFLALRGWTRAPALLLPGGGAASSSSRRRPFTRQENTVVQTCAVACY 123
>Os05g0251900 Oligopeptide transporter OPT superfamily protein
Length = 638
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%)
Query: 57 DDPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSA 116
D ATSVE VF + P +RE +T RA V+ +L+V+ + M++ +T GI+P+LN+ A
Sbjct: 7 DPMSATSVEAVFEKQPSPEFRELVTPRAMAVAVVLSVVICFVGMRIQMTAGIVPALNMPA 66
Query: 117 GLLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFS 162
+L FF ++ ++ G PFTRQEN + TC+++ +A +
Sbjct: 67 SILSFFLLKWLIRLLQSCGFPMLPFTRQENMFLLTCIITCLNLALT 112
>Os05g0252000 Oligopeptide transporter OPT superfamily protein
Length = 686
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%)
Query: 58 DPDATSVERVFADKAVPSWREQLTLRAFVVSALLAVMFSVIVMKLNLTTGIIPSLNVSAG 117
DP TSVE F +P + +T RA V+ LL ++F + M++ + TG +P+LN+
Sbjct: 7 DPRLTSVEAAFEKNPLPGFSWLVTPRAMAVAVLLGIVFCFVGMRIQMMTGFVPALNMPVT 66
Query: 118 LLGFFFVRLWTSAVERIGLLKQPFTRQENTVIQTCVVSAYGIAFSG 163
+L FF +++ +++ L PFTRQEN + TCV++ +A +G
Sbjct: 67 VLSFFLLKVLARQLQKWRLTVVPFTRQENMFLITCVITCLNLAITG 112
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,124,071
Number of extensions: 148194
Number of successful extensions: 388
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 385
Number of HSP's successfully gapped: 12
Length of query: 240
Length of database: 17,035,801
Length adjustment: 98
Effective length of query: 142
Effective length of database: 11,918,829
Effective search space: 1692473718
Effective search space used: 1692473718
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 154 (63.9 bits)